##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088563_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2014882 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.768872321059 31.0 31.0 34.0 30.0 34.0 2 31.918008101715138 31.0 31.0 34.0 30.0 34.0 3 32.044367858762946 33.0 31.0 34.0 30.0 34.0 4 35.69539853946782 37.0 35.0 37.0 35.0 37.0 5 35.62236001909789 37.0 35.0 37.0 33.0 37.0 6 35.688229385145135 37.0 35.0 37.0 33.0 37.0 7 35.536344560128086 37.0 35.0 37.0 33.0 37.0 8 35.58379895199818 37.0 35.0 37.0 33.0 37.0 9 37.194461015583045 39.0 37.0 39.0 33.0 39.0 10 37.06241308424017 39.0 37.0 39.0 33.0 39.0 11 37.12405490743379 39.0 37.0 39.0 33.0 39.0 12 36.97498612821992 39.0 37.0 39.0 33.0 39.0 13 37.02834558053524 39.0 37.0 39.0 33.0 39.0 14 38.035662138030915 40.0 37.0 41.0 33.0 41.0 15 38.03736595989244 40.0 37.0 41.0 33.0 41.0 16 37.93086493402591 40.0 37.0 41.0 33.0 41.0 17 37.98893036912335 40.0 37.0 41.0 33.0 41.0 18 37.96458849699387 40.0 37.0 41.0 33.0 41.0 19 38.04015719034663 40.0 37.0 41.0 33.0 41.0 20 37.942771834777425 40.0 37.0 41.0 33.0 41.0 21 37.81040080759072 40.0 37.0 41.0 32.0 41.0 22 37.69404163618515 40.0 37.0 41.0 32.0 41.0 23 37.499339415409935 39.0 36.0 41.0 32.0 41.0 24 37.652450118667 40.0 37.0 41.0 32.0 41.0 25 37.59067032213301 40.0 37.0 41.0 32.0 41.0 26 37.38820387496637 39.0 36.0 41.0 32.0 41.0 27 37.34729279431748 39.0 36.0 41.0 32.0 41.0 28 37.195792607209754 39.0 36.0 41.0 31.0 41.0 29 36.976543043215436 39.0 35.0 41.0 31.0 41.0 30 36.80823393131707 39.0 35.0 41.0 30.0 41.0 31 36.524283307905876 39.0 35.0 40.0 30.0 41.0 32 36.361369549184516 38.0 35.0 40.0 30.0 41.0 33 36.180593205954494 38.0 35.0 40.0 30.0 41.0 34 35.97325352055356 38.0 35.0 40.0 29.0 41.0 35 35.74882598583937 38.0 35.0 40.0 28.0 41.0 36 35.67261804909667 38.0 35.0 40.0 27.0 41.0 37 35.505210230673555 38.0 35.0 40.0 26.0 41.0 38 35.3591381530035 38.0 35.0 40.0 25.0 41.0 39 35.21717897127474 38.0 34.0 40.0 25.0 41.0 40 35.01548825191748 38.0 34.0 40.0 24.0 41.0 41 34.85664421043019 38.0 34.0 40.0 23.0 41.0 42 34.53250909978848 38.0 33.0 40.0 22.0 41.0 43 34.13120817993312 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 4.0 14 8.0 15 5.0 16 27.0 17 45.0 18 160.0 19 303.0 20 634.0 21 1296.0 22 2423.0 23 4238.0 24 6881.0 25 10672.0 26 16024.0 27 22583.0 28 31202.0 29 40706.0 30 51377.0 31 62673.0 32 76778.0 33 94945.0 34 117929.0 35 148112.0 36 196065.0 37 291763.0 38 379430.0 39 458593.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.05864164750094 20.803401886562092 14.67495366974344 22.463002796193525 2 18.25352551663075 23.90546940217839 35.83346320032637 22.007541880864487 3 19.22191969554545 24.675489681281583 33.59938696161859 22.503203661554373 4 13.073122892556487 16.16049972157178 36.60611390642231 34.16026347944941 5 12.001794646038826 39.0828346275365 34.93559424323608 13.979776483188594 6 31.517627335000263 38.312764717735334 13.340632354649056 16.82897559261535 7 25.05764605569954 34.13356216393814 21.41897143356286 19.389820346799468 8 27.50017122590802 34.362508573703074 18.94756119713214 19.189759003256768 9 24.458851684614782 14.465760277773091 21.89031417224433 39.1850738653678 10 16.327904065846038 28.16204621412073 32.80881957355319 22.701230146480043 11 32.789910277624195 22.847243659926487 23.670567308656288 20.692278753793026 12 21.3483469503425 28.08258746666058 30.870443033388558 19.698622549608363 13 31.977852797335032 21.205807585754403 26.41648493559424 20.399854681316327 14 20.381441692367098 22.80957396016243 28.944573429113962 27.86441091835651 15 22.199711943428944 30.07664964995469 26.123763078929684 21.599875327686682 16 21.065253449085354 28.557503615596346 26.912245977680083 23.464996957638213 17 21.309734267316895 26.97929705064614 27.54811448015318 24.162854201883782 18 22.846201415268983 25.41851086068564 30.545361961643415 21.189925762401966 19 22.64375779822342 24.52426494454762 31.992394591842103 20.839582665386857 20 23.423158279244145 24.423663519749546 31.382383683014687 20.770794517991625 21 22.01731912836583 25.33359273644809 32.16322345427673 20.485864680909355 22 20.55430541341875 25.70378811265374 31.745382608013767 21.996523865913737 23 21.59024697227927 25.890895844024612 32.513417659197906 20.005439524498208 24 21.48120832882521 25.891541043098304 30.367584801492097 22.259665826584385 25 21.45410996773012 25.959535099325915 31.46382765839389 21.122527274550073 26 21.030214176314047 27.012202203404467 31.45539043973791 20.502193180543575 27 19.879327920940284 27.136527101835245 31.135768744770164 21.84837623245431 28 20.58304158754706 26.557336856451148 31.11824910838451 21.74137244761728 29 20.78712301762585 26.40809734763624 30.415428794341302 22.38935084039661 30 20.761860992355878 26.800130230951492 32.129325687558875 20.308683089133755 31 21.605831011443847 26.424574739364388 31.94723065668362 20.022363592508146 32 20.932143917112764 26.450581225104003 30.83123478198723 21.786040075796002 33 20.659721015920535 26.221386661849177 31.690292533260013 21.428599788970274 34 19.782299906396503 26.81268679753951 32.29429812763229 21.1107151684317 35 19.39791015056961 29.01033410393264 30.951837378069786 20.639918367427967 36 21.71437334791814 26.58051439240611 30.736787563738222 20.96832469593753 37 20.698333698946143 27.29971283678151 30.770189023476313 21.231764440796034 38 20.399457635732514 25.76845691211694 32.15339657607741 21.678688876073142 39 19.816445826604237 25.54114831538522 32.96818374475527 21.67422211325527 40 18.808347089308455 25.951594187649697 32.76593865050162 22.474120072540227 41 20.11393223027453 25.104894480173034 32.776112943586774 22.005060345965667 42 19.0492544972857 27.060741026025347 31.999491781652722 21.890512695036236 43 19.215120289922684 26.996022595864172 31.21363930989507 22.57521780431807 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 567.0 1 534.0 2 501.0 3 1372.5 4 2244.0 5 2244.0 6 3422.0 7 4600.0 8 4956.0 9 5312.0 10 8039.0 11 10766.0 12 10766.0 13 19618.0 14 28470.0 15 48262.0 16 68054.0 17 61612.5 18 55171.0 19 55171.0 20 54621.5 21 54072.0 22 41573.5 23 29075.0 24 32016.5 25 34958.0 26 34958.0 27 38728.0 28 42498.0 29 45642.5 30 48787.0 31 52975.0 32 57163.0 33 57163.0 34 64324.5 35 71486.0 36 78420.0 37 85354.0 38 91014.0 39 96674.0 40 96674.0 41 101010.5 42 105347.0 43 111588.5 44 117830.0 45 126628.0 46 135426.0 47 135426.0 48 178205.0 49 220984.0 50 202824.5 51 184665.0 52 167336.0 53 150007.0 54 150007.0 55 131930.5 56 113854.0 57 96419.5 58 78985.0 59 70378.5 60 61772.0 61 61772.0 62 54303.0 63 46834.0 64 40477.5 65 34121.0 66 28880.5 67 23640.0 68 23640.0 69 20250.0 70 16860.0 71 14391.5 72 11923.0 73 9703.0 74 7483.0 75 7483.0 76 5933.5 77 4384.0 78 3356.0 79 2328.0 80 1822.0 81 1316.0 82 1316.0 83 994.0 84 672.0 85 518.0 86 364.0 87 265.0 88 166.0 89 166.0 90 129.0 91 92.0 92 72.5 93 53.0 94 34.0 95 15.0 96 15.0 97 10.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2014882.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.31906958801957 #Duplication Level Percentage of deduplicated Percentage of total 1 79.8448293168525 37.78183034687689 2 10.927701599108346 10.341773448106412 3 3.4631488876481384 4.916189496248846 4 1.6004959000067054 3.0293590747102925 5 0.9135022764338527 2.161303889369389 6 0.5893474409651606 1.6732423542331014 7 0.4091868448776559 1.355363855108758 8 0.3074500385588636 1.1638599815524933 9 0.23855882680662324 1.0159543553849024 >10 1.4958135379620299 13.432145091900624 >50 0.1268168864376115 4.13073249442248 >100 0.07191588933462828 6.427888606419685 >500 0.00514388033071988 1.6989573466260184 >1k 0.005038903181113353 4.1275791709021625 >5k 6.298628976391691E-4 1.7600566255088328 >10k+ 4.199085984261127E-4 4.983763862629139 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 36790 1.825913378550208 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26709 1.3255863122505438 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25880 1.284442463628143 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10950 0.5434561428411192 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6814 0.3381835760109029 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5866 0.2911336743293156 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5816 0.28865213943049767 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5791 0.28741137198108874 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5586 0.27723707889593535 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5559 0.2758970500505737 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4017 0.19936651377102976 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3282 0.1628879507584067 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3263 0.16194496749685588 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3032 0.1504802762643172 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2842 0.1410504436488092 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2592 0.12864276915471973 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2340 0.11613583326467752 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2284 0.11335651417800148 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2182 0.10829418298441298 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 2037 0.1010977317778411 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 9.926139595271584E-5 0.0 10 0.0 0.0 0.0 2.4815348988178963E-4 0.0 11 0.0 0.0 0.0 5.459376777399371E-4 0.0 12 0.0 0.0 0.0 0.001141506053456232 0.0 13 0.0 0.0 0.0 0.001290398147385306 0.0 14 0.0 0.0 0.0 0.0014889209392907376 0.0 15 0.0 0.0 0.0 0.0022333814089361063 0.0 16 0.0 0.0 0.0 0.003771933046203202 0.0 17 0.0 0.0 0.0 0.005360115381446655 0.0 18 0.0 0.0 0.0 0.006352729340973814 0.0 19 4.963069797635792E-5 0.0 0.0 0.007990542374193626 0.0 20 4.963069797635792E-5 0.0 0.0 0.014492163809096513 0.0 21 4.963069797635792E-5 0.0 0.0 0.02675094620925692 4.963069797635792E-5 22 4.963069797635792E-5 0.0 0.0 0.0429305537495496 4.963069797635792E-5 23 4.963069797635792E-5 0.0 0.0 0.05270780125089211 4.963069797635792E-5 24 4.963069797635792E-5 0.0 0.0 0.06585993621462696 4.963069797635792E-5 25 4.963069797635792E-5 0.0 0.0 0.07285786462929343 4.963069797635792E-5 26 4.963069797635792E-5 0.0 0.0 0.08566258470719378 4.963069797635792E-5 27 4.963069797635792E-5 0.0 0.0 0.13767555618641686 9.926139595271584E-5 28 4.963069797635792E-5 0.0 0.0 0.2780808007615334 9.926139595271584E-5 29 4.963069797635792E-5 0.0 0.0 0.4803755257131683 9.926139595271584E-5 30 4.963069797635792E-5 0.0 0.0 0.7587541106625599 9.926139595271584E-5 31 4.963069797635792E-5 0.0 0.0 1.144384633938861 9.926139595271584E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTGG 805 0.0 22.52174 1 ATTGGAC 875 0.0 21.354286 3 GGTATCA 9340 0.0 20.837257 1 TTGGACC 1205 0.0 20.26556 4 GGACCCT 1200 0.0 18.9625 6 ACCGTCC 80 1.6176558E-5 18.5 8 TGGACCC 1360 0.0 17.955883 5 TATTGGA 1025 0.0 17.687805 2 CGCGATA 85 2.7247634E-5 17.411764 14 ACGTTTA 130 1.3948011E-8 17.076923 26 GTCTATA 90 4.4486304E-5 16.444445 1 GACCCTC 1375 0.0 16.279999 7 TTAGAAC 165 9.749783E-10 15.696971 3 GGCGCTA 85 5.36664E-4 15.235294 10 TATACCG 85 5.36664E-4 15.235294 5 TAGAACA 195 4.1836756E-11 15.179487 4 TCTATAC 150 8.110146E-8 14.8 3 GCGCTAG 90 8.277827E-4 14.388888 11 ACGGGCG 155 1.2114288E-7 14.32258 5 TGCGCGA 105 1.6566081E-4 14.095238 12 >>END_MODULE