##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088561_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3125445 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.690967526224266 31.0 31.0 34.0 30.0 34.0 2 31.843628027368904 31.0 31.0 34.0 30.0 34.0 3 31.950647027863234 31.0 31.0 34.0 30.0 34.0 4 35.63517707078512 37.0 35.0 37.0 33.0 37.0 5 35.55589044120117 37.0 35.0 37.0 33.0 37.0 6 35.62566706500994 37.0 35.0 37.0 33.0 37.0 7 35.4643102022272 37.0 35.0 37.0 33.0 37.0 8 35.52618107181537 37.0 35.0 37.0 33.0 37.0 9 37.107398786412816 39.0 37.0 39.0 33.0 39.0 10 36.972321381435286 39.0 37.0 39.0 33.0 39.0 11 37.03681491755574 39.0 37.0 39.0 33.0 39.0 12 36.8725285519342 39.0 37.0 39.0 32.0 39.0 13 36.93659686860591 39.0 37.0 39.0 33.0 39.0 14 37.90828729988849 40.0 37.0 41.0 33.0 41.0 15 37.918509844198184 40.0 37.0 41.0 33.0 41.0 16 37.81371548691466 40.0 37.0 41.0 32.0 41.0 17 37.882592398842405 40.0 37.0 41.0 33.0 41.0 18 37.855737023047915 40.0 37.0 41.0 32.0 41.0 19 37.94497967489429 40.0 37.0 41.0 33.0 41.0 20 37.848894157471975 40.0 37.0 41.0 32.0 41.0 21 37.71931292983879 40.0 37.0 41.0 32.0 41.0 22 37.61039979906861 39.0 37.0 41.0 32.0 41.0 23 37.42385228343484 39.0 36.0 41.0 32.0 41.0 24 37.561097699687565 39.0 36.0 41.0 32.0 41.0 25 37.48165653210983 39.0 36.0 41.0 32.0 41.0 26 37.279890703563815 39.0 36.0 41.0 31.0 41.0 27 37.23872280587244 39.0 36.0 41.0 31.0 41.0 28 37.08186418254041 39.0 36.0 41.0 31.0 41.0 29 36.85580101393562 39.0 35.0 41.0 30.0 41.0 30 36.6765836544876 39.0 35.0 40.0 30.0 41.0 31 36.363989767857056 38.0 35.0 40.0 30.0 41.0 32 36.20345550793567 38.0 35.0 40.0 30.0 41.0 33 36.024189835367444 38.0 35.0 40.0 30.0 41.0 34 35.82842347249752 38.0 35.0 40.0 29.0 41.0 35 35.61607195135413 38.0 35.0 40.0 27.0 41.0 36 35.51589997584344 38.0 35.0 40.0 27.0 41.0 37 35.35427339146906 38.0 34.0 40.0 26.0 41.0 38 35.19493192169435 38.0 34.0 40.0 25.0 41.0 39 35.03624091929309 38.0 34.0 40.0 24.0 41.0 40 34.81316580518934 38.0 34.0 40.0 23.0 41.0 41 34.631173160941884 38.0 33.0 40.0 23.0 41.0 42 34.3074435800342 38.0 33.0 40.0 21.0 41.0 43 33.898875520125934 38.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 5.0 14 9.0 15 14.0 16 32.0 17 78.0 18 219.0 19 502.0 20 1093.0 21 2178.0 22 4021.0 23 7036.0 24 11652.0 25 17900.0 26 26539.0 27 37023.0 28 50907.0 29 65949.0 30 82643.0 31 101016.0 32 123761.0 33 152778.0 34 189603.0 35 235664.0 36 312960.0 37 458422.0 38 587192.0 39 656245.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.90310339807611 21.51437635280736 15.56741520007551 22.01510504904102 2 18.620484443015314 24.212520137132472 35.67360807820966 21.49338734164255 3 19.119261417174194 24.217511426372884 34.49300819563294 22.17021896081998 4 13.302201766468455 16.504497759519044 36.05764939072676 34.13565108328574 5 11.708252744809139 39.548448300961944 34.78215102169451 13.961147932534407 6 31.503993831278425 38.47829669055127 13.187882045596707 16.8298274325736 7 24.559030794014934 35.057791770451885 20.734103463666774 19.649073971866407 8 27.589575244485186 34.37523296682553 18.561836794440474 19.47335499424882 9 24.28380598602759 14.552199766753215 22.323893077625744 38.84010116959345 10 16.491475613872584 28.72275787927799 32.30333600495289 22.48243050189653 11 33.09695099417843 23.003124355091835 23.349475034755052 20.550449615974685 12 21.69159911628584 28.608630131069333 30.337311966775932 19.362458785868892 13 32.62431429764401 21.617945604545913 25.948784893031235 19.80895520477884 14 20.081140445600546 23.69441791488892 29.089137706790552 27.135303932719978 15 21.994627964977788 30.913485919605048 25.914421786337627 21.17746432907954 16 20.865924692323812 28.869872930094754 27.000123182458818 23.264079195122616 17 21.19343005556009 27.493460931163405 27.39229133771351 23.920817675563 18 22.596526254661338 25.684022595182448 30.77101020814636 20.948440942009857 19 22.314038480920317 24.98610597850866 32.42360687838052 20.276248662190504 20 23.09226366165458 24.62049404164847 31.73829646658316 20.54894583011379 21 21.90155321882164 25.410717513826032 32.66814805571687 20.01958121163546 22 20.285751309013598 26.090684686500644 32.05690709642947 21.56665690805629 23 21.64574964525052 26.060864932833567 32.62920960055288 19.664175821363038 24 21.10672240272985 26.245926580055002 30.69767665084492 21.94967436637023 25 21.126303614365312 26.38302705694709 32.052651702397576 20.438017626290016 26 20.40547825989579 27.66415662409673 31.826411918942743 20.10395319706474 27 19.24340373930752 27.336235320090417 31.543572195319385 21.87678874528267 28 20.081204436488246 27.190496073359157 31.3252352864952 21.403064203657397 29 20.287095117655245 26.89562606284865 30.422515833745273 22.39476298575083 30 20.400582956986927 27.369574572580863 32.6300094866491 19.59983298378311 31 21.62306487556172 27.010457710821978 31.995731807790573 19.370745605825732 32 20.538163365536747 27.061778402755447 30.948776894170273 21.451281337537534 33 20.14938672733003 26.736320747925497 31.873413225956625 21.240879298787853 34 19.400981300262842 27.14435864332919 32.89765137444428 20.557008681963687 35 18.824871338321422 29.43305673272126 31.428740547346056 20.313331381611256 36 21.483436758605574 26.993212166587476 31.143117220107857 20.38023385469909 37 20.350254123812768 28.068898988783996 31.018239002766006 20.562607884637227 38 19.951974838782956 26.19409396101995 32.645687254135005 21.20824394606208 39 19.448974466036038 25.937778460347243 33.46393873512412 21.1493083384926 40 18.096847008985918 26.228201104162768 33.467074288621305 22.20787759823001 41 19.41486732289322 25.25873915554425 33.75010598490775 21.57628753665478 42 18.56484436616226 27.300688381974407 32.65279024266945 21.48167700919389 43 18.402723452180407 27.242584655944995 32.159484489408705 22.19520740246589 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1267.0 1 1158.5 2 1050.0 3 2194.5 4 3339.0 5 3339.0 6 5004.0 7 6669.0 8 7379.5 9 8090.0 10 12455.5 11 16821.0 12 16821.0 13 30635.0 14 44449.0 15 79570.0 16 114691.0 17 103908.0 18 93125.0 19 93125.0 20 93582.5 21 94040.0 22 73034.5 23 52029.0 24 56375.5 25 60722.0 26 60722.0 27 66171.0 28 71620.0 29 74979.5 30 78339.0 31 84932.0 32 91525.0 33 91525.0 34 101861.5 35 112198.0 36 123016.5 37 133835.0 38 140488.5 39 147142.0 40 147142.0 41 152064.0 42 156986.0 43 167159.5 44 177333.0 45 191904.5 46 206476.0 47 206476.0 48 277922.5 49 349369.0 50 319974.5 51 290580.0 52 256862.0 53 223144.0 54 223144.0 55 196297.5 56 169451.0 57 143386.0 58 117321.0 59 104178.5 60 91036.0 61 91036.0 62 79373.5 63 67711.0 64 58447.0 65 49183.0 66 41374.0 67 33565.0 68 33565.0 69 28637.0 70 23709.0 71 19850.0 72 15991.0 73 12898.0 74 9805.0 75 9805.0 76 7893.5 77 5982.0 78 4641.0 79 3300.0 80 2531.5 81 1763.0 82 1763.0 83 1318.0 84 873.0 85 678.5 86 484.0 87 363.0 88 242.0 89 242.0 90 175.5 91 109.0 92 78.5 93 48.0 94 32.5 95 17.0 96 17.0 97 14.0 98 11.0 99 8.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3125445.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.88399188538251 #Duplication Level Percentage of deduplicated Percentage of total 1 75.1589908332369 31.479585621728322 2 12.979238777859656 10.872446633006314 3 4.758685515966538 5.979382366074892 4 2.2146881271670886 3.710399181876773 5 1.176398684298689 2.4636136473570476 6 0.7508688031421888 1.8869629714676588 7 0.5118668073882666 1.5007317644932767 8 0.35024779555723917 1.1735820661594014 9 0.2637867674997317 0.9943598546487038 >10 1.5709552705561605 12.359754745726006 >50 0.1490756986744215 4.361711401918981 >100 0.10117335126761307 8.093707448971182 >500 0.0068968364191060345 1.9343178966162327 >1k 0.006053889745635291 5.2093961140496035 >5k 6.89683641907818E-4 2.1716703149792687 >10k+ 3.8315757883767665E-4 5.808377970926433 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 63006 2.0159049351372365 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 45177 1.4454581667570539 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 43916 1.405111912063722 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17256 0.5521133790548226 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 11612 0.37153109397221834 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9949 0.3183226708516707 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 9441 0.3020689853764824 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 9197 0.29426209707737616 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 8667 0.27730451183751437 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6955 0.2225283119683757 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6913 0.22118450332672626 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5638 0.18039031241951145 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5632 0.1801983397564187 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 5269 0.16858399363930576 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 4588 0.14679509637827573 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4404 0.1409079347100973 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4128 0.1320771922078296 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3941 0.12609404420810477 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3934 0.1258700761011632 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3907 0.1250061991172457 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3748 0.11991892354528715 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3723 0.11911903744906725 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3696 0.11825516046514978 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3541 0.11329586666858639 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3413 0.1092004498559405 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3409 0.10907246808054534 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 3.1995443848795934E-5 0.0 9 6.399088769759187E-5 0.0 0.0 1.2798177539518374E-4 0.0 10 6.399088769759187E-5 0.0 0.0 1.5997721924397966E-4 0.0 11 6.399088769759187E-5 0.0 0.0 1.919726630927756E-4 0.0 12 9.59863315463878E-5 0.0 0.0 5.11927101580735E-4 0.0 13 9.59863315463878E-5 0.0 0.0 5.439225454295308E-4 0.0 14 9.59863315463878E-5 0.0 0.0 6.719043208247145E-4 0.0 15 9.59863315463878E-5 0.0 0.0 8.318815400686942E-4 0.0 16 9.59863315463878E-5 0.0 0.0 0.001407799529347021 0.0 17 9.59863315463878E-5 0.0 0.0 0.0019517220747765518 0.0 18 9.59863315463878E-5 0.0 0.0 0.002303671957113307 0.0 19 9.59863315463878E-5 0.0 0.0 0.003167548941030797 0.0 20 9.59863315463878E-5 0.0 0.0 0.0055032163419929 0.0 21 9.59863315463878E-5 0.0 0.0 0.01007856481237072 0.0 22 9.59863315463878E-5 0.0 0.0 0.015453799378968435 0.0 23 9.59863315463878E-5 0.0 0.0 0.018173412106116088 0.0 24 9.59863315463878E-5 0.0 0.0 0.022268828918761967 0.0 25 9.59863315463878E-5 0.0 0.0 0.025180414309002398 0.0 26 9.59863315463878E-5 0.0 0.0 0.032027439292644726 0.0 27 9.59863315463878E-5 0.0 0.0 0.08763552070185206 0.0 28 9.59863315463878E-5 0.0 0.0 0.22627177889868483 0.0 29 9.59863315463878E-5 0.0 0.0 0.4402893028032808 0.0 30 9.59863315463878E-5 0.0 0.0 0.7365031219554335 0.0 31 9.59863315463878E-5 0.0 0.0 1.1407335595411214 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13360 0.0 25.049776 1 GTATTGG 920 0.0 22.923912 1 ATTGGAC 990 0.0 21.863636 3 TTGGACC 1450 0.0 19.903448 4 GGACCCT 1395 0.0 19.096773 6 GACCCTC 1360 0.0 19.044117 7 GGGTACG 50 0.007037524 18.499998 1 TGGACCC 1635 0.0 17.764524 5 GAACCGT 75 2.0686995E-4 17.266666 6 TATTGGA 1355 0.0 15.97417 2 GTATCAA 21800 0.0 15.368578 2 ACCCTCG 1650 0.0 15.024243 8 CGACGAG 185 3.0559022E-10 15.000001 24 ATACACA 1210 0.0 14.830578 37 TGAACCG 75 0.004106506 14.8 5 CCCTCGC 1650 0.0 14.68788 9 ACACCGA 190 4.5656634E-10 14.605264 6 TACGTTA 115 2.2121389E-5 14.47826 19 TATACTG 375 0.0 14.306667 5 ACTCTGT 1850 0.0 14.1 37 >>END_MODULE