##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088556_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1195322 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78035123590129 31.0 31.0 34.0 30.0 34.0 2 31.94189515461106 31.0 31.0 34.0 30.0 34.0 3 32.0797324904921 33.0 31.0 34.0 30.0 34.0 4 35.737402975934515 37.0 35.0 37.0 35.0 37.0 5 35.6400944682688 37.0 35.0 37.0 33.0 37.0 6 35.689792373937735 37.0 35.0 37.0 33.0 37.0 7 35.55727243370406 37.0 35.0 37.0 33.0 37.0 8 35.584399852090066 37.0 35.0 37.0 33.0 37.0 9 37.214384910509466 39.0 37.0 39.0 33.0 39.0 10 37.06008757472882 39.0 37.0 39.0 33.0 39.0 11 37.12728787724144 39.0 37.0 39.0 33.0 39.0 12 36.989220477829406 39.0 37.0 39.0 33.0 39.0 13 37.039870428219345 39.0 37.0 39.0 33.0 39.0 14 38.125889090972976 40.0 37.0 41.0 33.0 41.0 15 38.126211179916375 40.0 37.0 41.0 33.0 41.0 16 38.027020334269764 40.0 37.0 41.0 33.0 41.0 17 38.01576478973866 40.0 37.0 41.0 33.0 41.0 18 37.97629258057661 40.0 37.0 41.0 33.0 41.0 19 38.02475232615145 40.0 37.0 41.0 33.0 41.0 20 37.92884846091681 40.0 37.0 41.0 33.0 41.0 21 37.78716111641884 40.0 37.0 41.0 32.0 41.0 22 37.66535879035105 40.0 37.0 41.0 32.0 41.0 23 37.50240186326362 39.0 36.0 41.0 32.0 41.0 24 37.67542135089959 40.0 37.0 41.0 32.0 41.0 25 37.62710298982199 40.0 37.0 41.0 32.0 41.0 26 37.45165319470402 39.0 36.0 41.0 32.0 41.0 27 37.406376691803544 39.0 36.0 41.0 32.0 41.0 28 37.28160027172594 39.0 36.0 41.0 31.0 41.0 29 37.08621275271433 39.0 36.0 41.0 31.0 41.0 30 36.981026033152574 39.0 36.0 41.0 31.0 41.0 31 36.76960601411168 39.0 35.0 41.0 30.0 41.0 32 36.61673674541253 39.0 35.0 40.0 30.0 41.0 33 36.47165533638635 39.0 35.0 40.0 30.0 41.0 34 36.2954249984523 39.0 35.0 40.0 30.0 41.0 35 36.11854128009022 38.0 35.0 40.0 29.0 41.0 36 36.080048723272895 38.0 35.0 40.0 29.0 41.0 37 35.96510312702351 38.0 35.0 40.0 28.0 41.0 38 35.8522624029341 38.0 35.0 40.0 27.0 41.0 39 35.7449222887222 38.0 35.0 40.0 27.0 41.0 40 35.59897835060344 38.0 35.0 40.0 26.0 41.0 41 35.48930915686317 38.0 35.0 40.0 26.0 41.0 42 35.259472343017194 38.0 34.0 40.0 24.0 41.0 43 34.90057323465978 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 2.0 14 1.0 15 4.0 16 17.0 17 36.0 18 70.0 19 160.0 20 337.0 21 685.0 22 1327.0 23 2334.0 24 3671.0 25 5647.0 26 8336.0 27 12086.0 28 16467.0 29 21813.0 30 28056.0 31 34967.0 32 43500.0 33 53914.0 34 68091.0 35 85786.0 36 114006.0 37 165167.0 38 236163.0 39 292676.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.431513851497755 20.958034738756588 13.933985988712665 23.676465421032994 2 18.138543421772543 23.214163212925055 35.70167703765178 22.945616327650626 3 19.064402729975686 24.68238683802356 32.46087665081041 23.79233378119034 4 13.648121594013999 16.45037906103962 36.60871296604597 33.292786378900416 5 12.838465283831468 38.47933862172703 34.978273636727174 13.703922457714324 6 32.118291138287425 37.98156480011244 14.33847950594066 15.56166455565948 7 26.20164273727079 33.02925906157504 21.969561339956932 18.799536861197232 8 26.90287637975374 34.9917428107238 19.433759271560298 18.671621537962153 9 25.07667390042181 14.612882553822319 21.356588433911533 38.95385511184434 10 16.162004882366425 28.009105496259583 33.5344785756474 22.29441104572659 11 33.66624223431008 22.830584562151454 23.259422983932364 20.243750219606095 12 20.933020558477132 27.209070024646074 31.25358689959693 20.604322517279865 13 31.013986189495384 21.13689867667457 25.92590113793605 21.923213995893995 14 20.573786812256447 22.29859401901747 28.193992915716436 28.93362625300965 15 22.94854440895424 29.6720046983156 24.969506124709493 22.40994476802067 16 22.01791651119949 28.224695939671484 26.201224439941704 23.556163109187313 17 21.677589804253582 27.218523544283464 27.414119375364965 23.68976727609799 18 22.73671864150413 26.14299745173267 29.136667776548915 21.983616130214283 19 22.98518725498234 25.450297074763117 30.16308576266479 21.40142990758975 20 23.43845424078198 25.40863466078596 29.64699051803614 21.50592058039591 21 22.48247752488451 26.108948049144914 29.94875021124015 21.459824214730425 22 21.752883323489403 26.318598670483766 29.75608246146227 22.17243554456456 23 22.22873836505979 26.3582532572813 30.148110718283444 21.264897659375464 24 22.224471732303094 26.34177234251524 28.971774969422466 22.461980955759202 25 22.20297124958798 26.310316383367827 29.728893135071555 21.75781923197264 26 21.915182687175506 27.04392623912218 29.533548282387507 21.50734279131481 27 21.21947056943652 27.03965960636548 29.44152286998817 22.299346954209827 28 21.57502329916123 26.77328786720231 29.488288511380194 22.163400322256262 29 21.69415437848546 26.732545707349146 29.172390368453023 22.40090954571237 30 21.69256484863493 27.030875362454637 29.87111422696144 21.405445561948998 31 22.160304922021012 26.710961565168212 29.840494862472205 21.28823865033857 32 21.66177816521406 26.747269773333045 29.305241600171332 22.285710461281564 33 21.65040047786287 26.484913688529115 29.82878253725774 22.035903296350273 34 21.19981059496939 26.641858846402894 30.288323982993703 21.87000657563401 35 20.903572426509342 27.86721904223297 29.521083021980687 21.708125509277 36 22.240199711876798 26.53176298938696 29.398689223489573 21.82934807524667 37 21.407788026991888 26.801313788251203 29.524011103284302 22.266887081472607 38 21.160908943364216 26.077241111600053 30.485007387130832 22.2768425579049 39 20.896294052983215 25.761510287604512 31.009719556738684 22.33247610267359 40 20.34949578439952 26.039678011447958 30.89117409367518 22.719652110477345 41 20.916288665313616 25.42678876486838 31.0050346266529 22.651887943165107 42 20.11407804758885 26.66026392888276 30.477561694673067 22.748096328855322 43 20.213800130843403 26.295424998452297 30.328396867120322 23.16237800358397 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 356.0 1 336.5 2 317.0 3 726.0 4 1135.0 5 1135.0 6 1712.5 7 2290.0 8 2365.0 9 2440.0 10 3541.5 11 4643.0 12 4643.0 13 8379.5 14 12116.0 15 19816.5 16 27517.0 17 25369.0 18 23221.0 19 23221.0 20 24197.0 21 25173.0 22 20959.0 23 16745.0 24 18901.0 25 21057.0 26 21057.0 27 24068.5 28 27080.0 29 29446.0 30 31812.0 31 34764.5 32 37717.0 33 37717.0 34 42091.0 35 46465.0 36 50781.5 37 55098.0 38 58978.5 39 62859.0 40 62859.0 41 65297.0 42 67735.0 43 71516.0 44 75297.0 45 79090.0 46 82883.0 47 82883.0 48 96736.0 49 110589.0 50 104307.0 51 98025.0 52 91254.5 53 84484.0 54 84484.0 55 77144.0 56 69804.0 57 62377.5 58 54951.0 59 49870.5 60 44790.0 61 44790.0 62 39909.0 63 35028.0 64 29939.0 65 24850.0 66 20982.0 67 17114.0 68 17114.0 69 14560.5 70 12007.0 71 10063.5 72 8120.0 73 6614.0 74 5108.0 75 5108.0 76 4060.0 77 3012.0 78 2314.5 79 1617.0 80 1256.5 81 896.0 82 896.0 83 686.0 84 476.0 85 353.0 86 230.0 87 182.5 88 135.0 89 135.0 90 110.0 91 85.0 92 54.0 93 23.0 94 19.5 95 16.0 96 16.0 97 9.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1195322.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.531260790736226 #Duplication Level Percentage of deduplicated Percentage of total 1 82.53227410401753 48.30718059234776 2 9.910296388769497 11.60124284889118 3 2.9759541629336357 5.225590476358373 4 1.3335184217058915 3.12210058040474 5 0.7475911212355213 2.1878725440937603 6 0.5062301171027379 1.7778172202559177 7 0.3480825990560649 1.4261599367447468 8 0.2382376775932576 1.1155481309912239 9 0.19449276891609454 1.0245516281406295 >10 1.0973710663612246 11.727820247841157 >50 0.07679907682601013 3.061097478777328 >100 0.03370270335634034 3.4783465903326274 >500 0.0034419739743984813 1.3025427314247942 >1k 0.0015775714049326374 1.7203267859650533 >5k 1.4341558226660338E-4 0.826250441800235 >10k+ 2.8683116453320675E-4 2.095551765630506 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14433 1.2074570701451157 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10531 0.881017834524923 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9843 0.8234601220424288 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4558 0.38131984519652445 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2247 0.18798281969209968 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1909 0.15970592024575805 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1848 0.15460269283088574 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1841 0.1540170765701627 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1787 0.14949946541601342 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1642 0.13736884287246448 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1369 0.11452980870426546 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1212 0.10139527257090558 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 8.365946581757887E-5 0.0 0.0 0.0 0.0 9 8.365946581757887E-5 0.0 0.0 1.6731893163515773E-4 0.0 10 8.365946581757887E-5 0.0 0.0 2.509783974527366E-4 0.0 11 8.365946581757887E-5 0.0 0.0 4.182973290878943E-4 0.0 12 8.365946581757887E-5 0.0 0.0 4.182973290878943E-4 0.0 13 1.6731893163515773E-4 0.0 0.0 4.182973290878943E-4 0.0 14 1.6731893163515773E-4 0.0 0.0 4.182973290878943E-4 0.0 15 1.6731893163515773E-4 0.0 0.0 0.001171232521446104 0.0 16 1.6731893163515773E-4 0.0 0.0 0.001840508247986735 0.0 17 1.6731893163515773E-4 0.0 0.0 0.0025097839745273657 0.0 18 1.6731893163515773E-4 0.0 0.0 0.0028444218377976812 0.0 19 1.6731893163515773E-4 0.0 0.0 0.0034300380985207335 0.0 20 1.6731893163515773E-4 0.0 0.0 0.006860076197041467 0.0 21 1.6731893163515773E-4 0.0 0.0 0.012883557735907145 0.0 22 1.6731893163515773E-4 0.0 0.0 0.019492655535495874 0.0 23 1.6731893163515773E-4 0.0 0.0 0.024010266689645135 0.0 24 1.6731893163515773E-4 0.0 0.0 0.03220889433976786 0.0 25 1.6731893163515773E-4 0.0 0.0 0.036559186562281965 0.0 26 1.6731893163515773E-4 0.0 0.0 0.04684930085784416 0.0 27 2.509783974527366E-4 0.0 0.0 0.08800975804009296 0.0 28 2.509783974527366E-4 0.0 0.0 0.20655522110360222 0.0 29 2.509783974527366E-4 0.0 0.0 0.3628311032508395 0.0 30 2.509783974527366E-4 0.0 0.0 0.5655379889268332 0.0 31 2.509783974527366E-4 0.0 0.0 0.8990046196757024 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTGG 400 0.0 21.275002 1 GGTATCA 3810 0.0 21.170603 1 GTCTAGA 75 9.266283E-6 19.733332 1 ATTGGAC 380 0.0 19.473684 3 CTAGACT 125 8.578354E-9 17.76 4 GGACCCT 530 0.0 17.103773 6 TTGGACC 555 0.0 17.0 4 TATTGGA 475 0.0 16.747368 2 CTAATAC 200 0.0 16.650002 3 TGGACCC 550 0.0 16.481817 5 TCTACAC 195 1.8189894E-12 16.128206 3 TTGCGAT 195 1.8189894E-12 16.128206 11 TGCGATA 185 1.8189894E-11 16.0 12 AGTGCGC 70 0.002592575 15.857142 8 GACCCTC 555 0.0 15.666667 7 CCTATAA 130 2.589004E-7 15.653846 1 GGACCGT 95 7.06005E-5 15.578948 6 GCGTGCG 135 3.9722363E-7 15.074073 9 TAGAACT 160 1.0963049E-8 15.031251 4 CCCTCGC 560 0.0 14.866071 9 >>END_MODULE