##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088555_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 836966 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.786753583777596 31.0 31.0 34.0 30.0 34.0 2 31.957580116755043 31.0 31.0 34.0 30.0 34.0 3 32.098240549795335 33.0 31.0 34.0 30.0 34.0 4 35.757162178630914 37.0 35.0 37.0 35.0 37.0 5 35.65305520176447 37.0 35.0 37.0 33.0 37.0 6 35.683968046491735 37.0 35.0 37.0 33.0 37.0 7 35.5589785009188 37.0 35.0 37.0 33.0 37.0 8 35.57563748109242 37.0 35.0 37.0 33.0 37.0 9 37.213500906846875 39.0 37.0 39.0 33.0 39.0 10 37.05713135300598 39.0 37.0 39.0 33.0 39.0 11 37.11431408205351 39.0 37.0 39.0 33.0 39.0 12 36.977038493797835 39.0 37.0 39.0 33.0 39.0 13 37.03350793222186 39.0 37.0 39.0 33.0 39.0 14 38.12060585495707 40.0 37.0 41.0 33.0 41.0 15 38.12165966120487 40.0 37.0 41.0 33.0 41.0 16 38.03056038118633 40.0 37.0 41.0 33.0 41.0 17 38.01175555518384 40.0 37.0 41.0 33.0 41.0 18 37.96453499903222 40.0 37.0 41.0 33.0 41.0 19 38.01554782392594 40.0 37.0 41.0 33.0 41.0 20 37.90470580644853 40.0 37.0 41.0 32.0 41.0 21 37.7720480879749 40.0 37.0 41.0 32.0 41.0 22 37.636650712215314 40.0 37.0 41.0 32.0 41.0 23 37.4829933354521 39.0 36.0 41.0 32.0 41.0 24 37.65014827364553 40.0 37.0 41.0 32.0 41.0 25 37.60724927894323 40.0 37.0 41.0 32.0 41.0 26 37.416805461631654 39.0 36.0 41.0 32.0 41.0 27 37.39392878563765 39.0 36.0 41.0 32.0 41.0 28 37.25679776717334 39.0 36.0 41.0 31.0 41.0 29 37.06065120924865 39.0 36.0 41.0 31.0 41.0 30 36.97080048651917 39.0 36.0 41.0 31.0 41.0 31 36.776350532757604 39.0 35.0 41.0 30.0 41.0 32 36.64042864345744 39.0 35.0 41.0 30.0 41.0 33 36.495422753134534 39.0 35.0 40.0 30.0 41.0 34 36.32696668681882 39.0 35.0 40.0 30.0 41.0 35 36.16263265174452 38.0 35.0 40.0 29.0 41.0 36 36.13645118200739 39.0 35.0 40.0 29.0 41.0 37 36.035353885343014 39.0 35.0 40.0 28.0 41.0 38 35.91880434808582 38.0 35.0 40.0 27.0 41.0 39 35.83546643471778 39.0 35.0 40.0 27.0 41.0 40 35.69673200584014 38.0 35.0 40.0 27.0 41.0 41 35.62243388620326 38.0 35.0 40.0 26.0 41.0 42 35.386909384610604 38.0 34.0 40.0 25.0 41.0 43 35.04192643428765 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 8.0 16 4.0 17 24.0 18 41.0 19 100.0 20 273.0 21 493.0 22 889.0 23 1523.0 24 2604.0 25 4100.0 26 5992.0 27 8560.0 28 11719.0 29 15236.0 30 19315.0 31 24575.0 32 30325.0 33 38014.0 34 47349.0 35 59506.0 36 78410.0 37 112755.0 38 163093.0 39 212057.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.14217303928714 21.170752455894267 13.63651570075726 24.050558804061335 2 17.925578816821712 23.02160422287166 36.04662554990286 23.00619141040377 3 18.712827044348277 24.62907692785609 32.64421732782455 24.013878699971087 4 13.390269138770272 16.47904454900199 37.21847721412817 32.91220909809957 5 12.445905807404364 38.67349450276355 35.583404821701244 13.297194868130843 6 31.891259621059874 38.55043096135327 14.665111844447685 14.893197573139172 7 26.07298265401462 33.255353264051344 22.173780057971292 18.49788402396274 8 26.46774181985887 35.19892086416891 19.89519287521835 18.438144440753863 9 25.026823072860786 14.67216111526633 21.466463392778202 38.83455241909468 10 15.699442988126162 28.00388546249191 34.27391315776268 22.022758391619256 11 33.616658263298625 22.940597348040423 23.43882547200245 20.003918916658503 12 20.65926214445987 27.289758484813003 31.385982226279204 20.664997144447923 13 30.59801712375413 21.43993901783346 26.05637504988255 21.905668808529857 14 20.451607353225818 22.36829214089939 28.104009003949983 29.07609150192481 15 22.59100130710208 30.116038166424918 24.910928281435567 22.382032245037433 16 21.95477474592755 28.749077023439423 26.164264737157783 23.131883493475243 17 21.654882038218997 27.542934838452222 27.416764838715075 23.385418284613714 18 22.391590578350854 26.780299319207714 29.260806293206652 21.567303809234783 19 22.610595890394592 26.054104945720614 30.04685972906904 21.28843943481575 20 23.157690993421475 25.942391925120017 29.52772275098391 21.372194330474596 21 22.337347036797194 26.444323903240992 29.781018583789542 21.437310476172268 22 21.718086517253987 26.687583486067535 29.65317587572255 21.94115412095593 23 22.263508911951025 26.715063694343616 29.890222541895366 21.13120485180999 24 22.049760683229668 26.794995256677094 28.637244523672408 22.517999536420835 25 22.16792557881682 26.787348590026355 29.356389626340857 21.68833620481597 26 21.607448809151148 27.4970548385478 29.401911188746016 21.493585163555032 27 21.177682247546496 27.40756494290091 29.220302855791036 22.194449953761563 28 21.64568214240483 26.997751402088017 29.453048271972815 21.903518183534338 29 21.59956318416758 27.112451401849057 28.97716275213091 22.310822661852452 30 21.845690266988147 27.248060255733208 29.82845181285739 21.077797664421254 31 22.165058078822796 27.10169827687146 29.50358795936753 21.229655684938216 32 21.511507038517692 27.063703901950614 29.242525980744738 22.182263078786953 33 21.570410267561645 26.724860985989874 29.688063792316534 22.016664954131947 34 21.06835881027425 26.96835952714925 30.11735243725552 21.84592922532098 35 20.923550060575938 28.183940566283454 29.42090837620644 21.471600996934164 36 22.292542349390537 26.72020129849958 29.200349834999273 21.78690651711061 37 21.416640580381998 26.91901463141872 29.447313271984765 22.217031516214515 38 21.277566830671734 26.099745987292195 30.377697540879794 22.24498964115627 39 20.72617047765381 26.091860362308623 31.029336914522215 22.15263224551535 40 20.276331416090976 26.170597132977925 31.049528893646816 22.503542557284288 41 20.83824193575366 25.48622046773704 31.13901878929371 22.536518807215586 42 20.001051416664474 26.679817340250377 30.69909649854355 22.620034744541595 43 20.12769933306729 26.283743903575534 30.419754207458844 23.168802555898328 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 262.0 1 233.5 2 205.0 3 478.0 4 751.0 5 751.0 6 1045.5 7 1340.0 8 1422.5 9 1505.0 10 2192.0 11 2879.0 12 2879.0 13 5138.0 14 7397.0 15 12095.5 16 16794.0 17 15824.5 18 14855.0 19 14855.0 20 15662.0 21 16469.0 22 14624.0 23 12779.0 24 14692.5 25 16606.0 26 16606.0 27 19104.5 28 21603.0 29 23797.5 30 25992.0 31 28651.0 32 31310.0 33 31310.0 34 34651.0 35 37992.0 36 40273.0 37 42554.0 38 44603.0 39 46652.0 40 46652.0 41 47880.0 42 49108.0 43 50601.5 44 52095.0 45 53678.0 46 55261.0 47 55261.0 48 64152.0 49 73043.0 50 68504.5 51 63966.0 52 59710.0 53 55454.0 54 55454.0 55 51109.5 56 46765.0 57 41773.0 58 36781.0 59 33359.0 60 29937.0 61 29937.0 62 26327.0 63 22717.0 64 19788.0 65 16859.0 66 14515.0 67 12171.0 68 12171.0 69 10516.0 70 8861.0 71 7653.0 72 6445.0 73 5263.5 74 4082.0 75 4082.0 76 3310.5 77 2539.0 78 1928.5 79 1318.0 80 1068.5 81 819.0 82 819.0 83 598.5 84 378.0 85 290.5 86 203.0 87 160.5 88 118.0 89 118.0 90 95.5 91 73.0 92 43.5 93 14.0 94 11.0 95 8.0 96 8.0 97 6.5 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 836966.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.29242676715069 #Duplication Level Percentage of deduplicated Percentage of total 1 86.99330312338273 57.66997176539391 2 7.809577265252483 10.354316578783104 3 1.995460221073628 3.968517017168575 4 0.9109402171207709 2.415537505309242 5 0.5126701046939899 1.69930726855669 6 0.348489846436327 1.386134257438548 7 0.2402818553269035 1.1150207108413694 8 0.17858604300097558 0.9471121741821918 9 0.12337560012237463 0.7360981142369208 >10 0.8049710644975281 9.688217006619098 >50 0.05435586935214674 2.4864223487506627 >100 0.024738478687526315 3.2155456760506738 >500 0.0014445826900790868 0.6225915053577881 >1k 0.0012640098538192009 1.1944276178542605 >5k 5.417185087796576E-4 2.500780453456941 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8596 1.027042914526994 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6160 0.7359916651333507 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6135 0.7330046859729069 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2618 0.3127964576816741 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1422 0.16989937464604296 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1275 0.15233593718263347 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1222 0.1460035413624926 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1211 0.14468927053189737 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1120 0.13381666638788195 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1110 0.13262187472370443 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 881 0.10526114561403928 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.1947916641775174E-4 0.0 11 0.0 0.0 0.0 1.1947916641775174E-4 0.0 12 0.0 0.0 0.0 5.973958320887587E-4 0.0 13 0.0 0.0 0.0 7.168749985065104E-4 0.0 14 0.0 0.0 0.0 7.168749985065104E-4 0.0 15 0.0 0.0 0.0 7.168749985065104E-4 0.0 16 0.0 0.0 0.0 8.363541649242622E-4 0.0 17 0.0 0.0 0.0 0.0011947916641775174 0.0 18 0.0 0.0 0.0 0.0016727083298485243 0.0 19 0.0 0.0 0.0 0.0021506249955195312 0.0 20 0.0 0.0 0.0 0.005018124989545573 0.0 21 0.0 0.0 0.0 0.00955833331342014 0.0 22 0.0 0.0 0.0 0.014098541637294706 0.0 23 0.0 0.0 0.0 0.017085520797738497 0.0 24 0.0 0.0 0.0 0.02198416662086632 0.0 25 0.0 0.0 0.0 0.02544906244698112 0.0 26 0.0 0.0 0.0 0.029989270770855687 0.0 27 0.0 0.0 0.0 0.07240437484915756 0.0 28 0.0 0.0 0.0 0.1785018746281211 0.0 29 0.0 0.0 0.0 0.31578343684211785 0.0 30 0.0 0.0 0.0 0.5088617697732046 0.0 31 0.0 0.0 0.0 0.8214192691220432 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1915 0.0 22.798954 1 CGGGATA 45 0.0038249525 20.555555 24 TACCCCG 85 1.2444798E-6 19.588236 5 CTATTAT 110 3.8478902E-8 18.5 1 TAGGACC 100 2.8726026E-7 18.5 4 ACGTTCG 75 2.0664203E-4 17.266666 22 GTGTAGA 110 7.8013545E-7 16.818182 1 CGTGCAA 90 4.443634E-5 16.444445 11 TAACCGT 90 4.443634E-5 16.444445 7 ATCGGCT 70 0.0025917047 15.857142 3 AACCGTG 95 7.056013E-5 15.578948 8 GCTTCGT 95 7.056013E-5 15.578948 28 ATTATAC 155 7.197741E-9 15.5161295 3 CGTTCGC 120 1.9338713E-6 15.416667 23 TTACCCC 120 1.9338713E-6 15.416667 4 CAGTTCG 85 5.3619867E-4 15.235294 13 TGATCGC 75 0.004103166 14.8 9 TTAGGAC 150 8.090683E-8 14.8 3 CGAACTA 75 0.004103166 14.8 29 CTACTCG 75 0.004103166 14.8 14 >>END_MODULE