##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088552_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4077730 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.687612470663826 31.0 31.0 34.0 30.0 34.0 2 31.828564667106455 31.0 31.0 34.0 30.0 34.0 3 31.937408558192917 31.0 31.0 34.0 30.0 34.0 4 35.61536443070042 37.0 35.0 37.0 33.0 37.0 5 35.53979223734774 37.0 35.0 37.0 33.0 37.0 6 35.60977038695549 37.0 35.0 37.0 33.0 37.0 7 35.450851331500616 37.0 35.0 37.0 33.0 37.0 8 35.513573483286045 37.0 35.0 37.0 33.0 37.0 9 37.089527016256596 39.0 37.0 39.0 33.0 39.0 10 36.961193360031196 39.0 37.0 39.0 33.0 39.0 11 37.020291927126124 39.0 37.0 39.0 33.0 39.0 12 36.86428699300836 39.0 37.0 39.0 32.0 39.0 13 36.92696156930449 39.0 37.0 39.0 33.0 39.0 14 37.89065190682071 40.0 37.0 41.0 33.0 41.0 15 37.89957623481692 40.0 37.0 41.0 33.0 41.0 16 37.79141311464957 40.0 37.0 41.0 32.0 41.0 17 37.86830172669598 40.0 37.0 41.0 33.0 41.0 18 37.849169022961306 40.0 37.0 41.0 32.0 41.0 19 37.932427600650364 40.0 37.0 41.0 32.0 41.0 20 37.83913795175257 40.0 37.0 41.0 32.0 41.0 21 37.710812878734004 40.0 37.0 41.0 32.0 41.0 22 37.604230294796366 40.0 37.0 41.0 32.0 41.0 23 37.41731747810669 39.0 36.0 41.0 32.0 41.0 24 37.550643617895254 39.0 36.0 41.0 32.0 41.0 25 37.48101198460908 39.0 36.0 41.0 32.0 41.0 26 37.256944427414275 39.0 36.0 41.0 31.0 41.0 27 37.21756957915311 39.0 36.0 41.0 31.0 41.0 28 37.04888111768067 39.0 35.0 41.0 31.0 41.0 29 36.81741434572667 39.0 35.0 41.0 30.0 41.0 30 36.640092894821386 39.0 35.0 40.0 30.0 41.0 31 36.33110848437734 38.0 35.0 40.0 30.0 41.0 32 36.16904012771812 38.0 35.0 40.0 30.0 41.0 33 35.98042759084098 38.0 35.0 40.0 30.0 41.0 34 35.7761369683623 38.0 35.0 40.0 29.0 41.0 35 35.54753576131819 38.0 35.0 40.0 27.0 41.0 36 35.441037292807515 38.0 35.0 40.0 26.0 41.0 37 35.27016575398567 38.0 34.0 40.0 25.0 41.0 38 35.105686006675285 38.0 34.0 40.0 25.0 41.0 39 34.9466203010008 38.0 34.0 40.0 24.0 41.0 40 34.71122683453785 38.0 34.0 40.0 23.0 41.0 41 34.527936621600745 38.0 33.0 40.0 22.0 41.0 42 34.18896984351588 38.0 33.0 40.0 20.0 41.0 43 33.769301302440326 38.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 5.0 14 10.0 15 11.0 16 47.0 17 117.0 18 308.0 19 652.0 20 1452.0 21 2940.0 22 5434.0 23 9697.0 24 16152.0 25 24491.0 26 36087.0 27 49981.0 28 68181.0 29 88769.0 30 110732.0 31 134597.0 32 162266.0 33 200399.0 34 246983.0 35 305373.0 36 403450.0 37 596167.0 38 747597.0 39 865826.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.558072751261115 21.285715336719203 15.346920958474444 21.809290953545233 2 18.423853467492943 24.453948642994998 35.71455196886503 21.407645920647024 3 19.42948650352034 24.376282882878463 34.26813447677997 21.926096136821222 4 13.04723461337558 16.25036478629041 36.09542564122686 34.60697495910715 5 11.860029967653572 39.4594786805404 34.6076861391019 14.072805212704125 6 31.582449058667443 38.23401745579035 13.038504265853796 17.145029219688404 7 24.649940040169408 34.83933462980629 20.83735313520022 19.673372194824083 8 27.880806232879568 34.178550320889315 18.479080272602648 19.461563173628466 9 24.24748573348407 14.523546188688313 22.354618868831434 38.874349208996186 10 16.519190824306662 28.700061063385757 32.223957937381826 22.556790174925755 11 32.80933264340699 22.975748762178956 23.465163215808797 20.749755378605254 12 21.74491690229613 28.53492016391473 30.47644154958764 19.243721384201503 13 32.76580352303856 21.276690707820283 26.140990207787173 19.816515561353988 14 20.088897499343997 23.55565473927896 29.24050881250107 27.114938948875967 15 22.02441064023366 30.679397606021 26.104621934262447 21.191569819482897 16 20.70301368653638 28.759971847081587 27.163274665071008 23.373739801311025 17 21.235932737086564 27.17995060977554 27.569162254489633 24.014954398648268 18 22.78341135877069 25.36337619214612 30.91124228431014 20.941970164773046 19 22.249094471679097 24.647021749846115 32.80040610830045 20.30347767017434 20 23.176816513109006 24.347124503093635 32.06202960961123 20.41402937418613 21 21.75703148565501 25.324923425533324 32.99529395031059 19.922751138501077 22 20.21232401360561 25.937887010665246 32.29821493821317 21.551574037515973 23 21.53399072523193 25.910371701902772 32.972977612544234 19.58265996032106 24 21.06770188315558 26.08318844062751 30.919114311148604 21.92999536506831 25 21.088375149899576 26.21142155071572 32.15862747165703 20.54157582772768 26 20.439558283652914 27.529605932712563 32.06806237784258 19.962773405791946 27 19.29929151758454 27.29319989307777 31.814857776262773 21.592650813074922 28 20.067709240190005 27.06412636442334 31.59395055582395 21.274213839562698 29 20.315126308019412 26.750030041223916 30.711327135440552 22.22351651531612 30 20.336412660965784 27.207784723363243 32.883074651828345 19.572727963842627 31 21.378585634654577 26.977337881615505 32.37914231692633 19.26493416680359 32 20.595723601121215 26.86426026244994 31.21567636896018 21.324339767468665 33 20.128135016295833 26.705985928445486 32.07512513089391 21.09075392436478 34 19.311945616801506 27.332658121062455 32.86676655884524 20.4886297032908 35 18.71224921708892 29.64521927641114 31.477660364957956 20.164871141541983 36 21.350040341072116 27.143582336250805 31.256066487972472 20.250310834704603 37 20.26080687048922 28.148626809523925 31.111010292491166 20.47955602749569 38 19.896437478695255 26.340071559421542 32.68477805053302 21.078712911350188 39 19.368325023971668 26.0721528889848 33.52630017190938 21.033221915134156 40 18.041116013075904 26.482945168022404 33.42403739335366 22.05190142554804 41 19.496680751300353 25.47571810786884 33.57794655359722 21.44965458723358 42 18.397221002861887 27.649917969066124 32.63222430126566 21.320636726806335 43 18.453158987966344 27.522690320349803 31.95608831384128 22.068062377842573 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1296.0 1 1298.0 2 1300.0 3 3052.0 4 4804.0 5 4804.0 6 7411.5 7 10019.0 8 11018.5 9 12018.0 10 18275.5 11 24533.0 12 24533.0 13 44117.0 14 63701.0 15 111172.0 16 158643.0 17 142643.5 18 126644.0 19 126644.0 20 126441.0 21 126238.0 22 96804.0 23 67370.0 24 73680.5 25 79991.0 26 79991.0 27 86987.5 28 93984.0 29 98234.0 30 102484.0 31 110010.5 32 117537.0 33 117537.0 34 128291.5 35 139046.0 36 151983.0 37 164920.0 38 173696.0 39 182472.0 40 182472.0 41 189538.0 42 196604.0 43 209007.5 44 221411.0 45 241462.0 46 261513.0 47 261513.0 48 358460.5 49 455408.0 50 418252.5 51 381097.0 52 339061.0 53 297025.0 54 297025.0 55 260893.0 56 224761.0 57 189184.0 58 153607.0 59 136483.5 60 119360.0 61 119360.0 62 104314.5 63 89269.0 64 77652.5 65 66036.0 66 56165.0 67 46294.0 68 46294.0 69 39613.0 70 32932.0 71 27668.0 72 22404.0 73 18258.0 74 14112.0 75 14112.0 76 11325.5 77 8539.0 78 6635.5 79 4732.0 80 3718.0 81 2704.0 82 2704.0 83 2077.0 84 1450.0 85 1113.0 86 776.0 87 578.5 88 381.0 89 381.0 90 284.0 91 187.0 92 130.0 93 73.0 94 55.5 95 38.0 96 38.0 97 26.0 98 14.0 99 8.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4077730.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.76814992648157 #Duplication Level Percentage of deduplicated Percentage of total 1 75.78801425301691 30.897371276973157 2 12.59275072896343 10.267662994103825 3 4.597801899538596 5.623316315179537 4 2.171700263532984 3.5414480775636887 5 1.1972825222313652 2.4405496685342145 6 0.7203472345524741 1.7620334434416987 7 0.4629209194421037 1.3210700613544266 8 0.3491861403199947 1.1388538336651977 9 0.25026224682623377 0.918245591959503 >10 1.587226183546084 12.309064525037462 >50 0.1576451154472412 4.482591632490086 >100 0.10812707428544813 8.264576551074123 >500 0.009812493467666685 2.652369378114757 >1k 0.005839336595182053 5.431106330954145 >5k 4.2139542439458114E-4 1.1085938990385305 >10k+ 6.621928097629132E-4 7.841146420515671 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 86880 2.1305971704845588 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 61361 1.5047832985509095 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 60518 1.4841100318069123 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24657 0.604674659675849 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 15250 0.373982583447163 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 14030 0.34406397677138995 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 12402 0.30413980327289936 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 12326 0.3022760212176873 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10736 0.2632837387468028 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 10686 0.26205756634205796 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 10651 0.2611992456587366 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 7853 0.19258263788921776 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7709 0.18905126136355277 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6560 0.16087381950251733 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 6429 0.15766124780208596 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5863 0.1437809761803749 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 5527 0.13554109762048985 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5230 0.12825763353630573 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4940 0.1211458335887859 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 4872 0.119478239118333 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 4817 0.11812944947311371 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 4736 0.11614305017742714 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 4546 0.11148359503939692 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 4468 0.10957076608799504 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4464 0.10947267229561544 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4421 0.10841816402753493 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4309 0.10567153784090658 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4282 0.1050094047423444 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 4.904689618979187E-5 0.0 0.0 0.0 0.0 7 4.904689618979187E-5 0.0 0.0 0.0 0.0 8 4.904689618979187E-5 0.0 0.0 0.0 0.0 9 9.809379237958374E-5 0.0 0.0 7.357034428468781E-5 0.0 10 1.2261724047447968E-4 0.0 0.0 9.809379237958374E-5 0.0 11 2.4523448094895936E-4 0.0 0.0 2.4523448094895936E-4 0.0 12 2.697579290438553E-4 0.0 0.0 5.395158580877105E-4 0.0 13 2.9428137713875124E-4 0.0 0.0 5.885627542775025E-4 0.0 14 4.1689861761323087E-4 0.0 0.0 7.357034428468781E-4 0.0 15 4.1689861761323087E-4 0.0 0.0 9.809379237958374E-4 0.0 16 4.6594551380302275E-4 0.0 0.0 0.001863782055212091 0.0 17 4.6594551380302275E-4 0.0 0.0 0.002525915153774281 0.0 18 4.6594551380302275E-4 0.0 0.0 0.0031144779080517835 0.0 19 4.6594551380302275E-4 0.0 0.0 0.0043651737608914765 0.0 20 4.6594551380302275E-4 0.0 0.0 0.007209893739899405 0.0 21 4.6594551380302275E-4 0.0 0.0 0.013536943348382556 0.0 22 4.6594551380302275E-4 0.0 0.0 0.021703251563982902 0.0 23 4.6594551380302275E-4 0.0 0.0 0.02636270670201313 0.0 24 4.6594551380302275E-4 0.0 0.0 0.0332047487204891 0.0 25 4.6594551380302275E-4 0.0 0.0 0.037300164552336715 0.0 26 4.6594551380302275E-4 0.0 0.0 0.04529480863127279 0.0 27 4.904689618979187E-4 0.0 0.0 0.09976138685003666 0.0 28 4.904689618979187E-4 0.0 0.0 0.23991289271236693 0.0 29 4.904689618979187E-4 0.0 0.0 0.4557192359474512 0.0 30 4.904689618979187E-4 0.0 0.0 0.7496818082609688 0.0 31 5.149924099928146E-4 0.0 0.0 1.1354111233455868 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTGG 1600 0.0 21.737501 1 GGTATCA 20770 0.0 21.590755 1 ATTGGAC 1680 0.0 20.372023 3 TTGGACC 2215 0.0 20.045147 4 GGACCCT 2225 0.0 19.373034 6 TGGACCC 2265 0.0 19.27594 5 TATTGGA 1945 0.0 17.40617 2 GACCCTC 2475 0.0 17.042425 7 ACCCTCG 2690 0.0 15.74907 8 ACTCTGT 2120 0.0 15.533019 37 GTATTAG 620 0.0 15.217741 1 CCCTCGC 2730 0.0 14.976191 9 TAAACGT 235 0.0 14.957446 4 TTAACGG 340 0.0 14.691175 35 ACCGTTA 190 4.5656634E-10 14.605264 8 CCTCGCA 2850 0.0 14.3456135 10 CGTTTAG 250 0.0 14.060001 26 TATACAC 2395 0.0 13.903966 37 TATAGCG 80 0.0063022496 13.875001 5 AATACCG 1305 0.0 13.750958 5 >>END_MODULE