##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088546_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3679261 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.690602813989006 31.0 31.0 34.0 30.0 34.0 2 31.8151794613103 31.0 31.0 34.0 30.0 34.0 3 31.915774118770045 31.0 31.0 34.0 30.0 34.0 4 35.57515191229978 37.0 35.0 37.0 33.0 37.0 5 35.52798265738691 37.0 35.0 37.0 33.0 37.0 6 35.61156547469723 37.0 35.0 37.0 33.0 37.0 7 35.4364648226913 37.0 35.0 37.0 33.0 37.0 8 35.51697555568904 37.0 35.0 37.0 33.0 37.0 9 37.07745604348265 39.0 37.0 39.0 33.0 39.0 10 36.96512533359281 39.0 37.0 39.0 33.0 39.0 11 37.02842309909517 39.0 37.0 39.0 33.0 39.0 12 36.877014976648844 39.0 37.0 39.0 32.0 39.0 13 36.94276133169134 39.0 37.0 39.0 33.0 39.0 14 37.85436368879511 40.0 37.0 41.0 32.0 41.0 15 37.8760049912197 40.0 37.0 41.0 32.0 41.0 16 37.7620516728767 40.0 37.0 41.0 32.0 41.0 17 37.88251173265501 40.0 37.0 41.0 33.0 41.0 18 37.89371099250638 40.0 37.0 41.0 33.0 41.0 19 37.98258590515867 40.0 37.0 41.0 33.0 41.0 20 37.90807447473827 40.0 37.0 41.0 32.0 41.0 21 37.789639821692454 40.0 37.0 41.0 32.0 41.0 22 37.680444252256095 40.0 37.0 41.0 32.0 41.0 23 37.49220645124116 39.0 36.0 41.0 32.0 41.0 24 37.60428221863032 40.0 36.0 41.0 32.0 41.0 25 37.53027034505027 40.0 36.0 41.0 32.0 41.0 26 37.29255168361255 39.0 36.0 41.0 31.0 41.0 27 37.237929573357256 39.0 36.0 41.0 31.0 41.0 28 37.05655836865066 39.0 35.0 41.0 31.0 41.0 29 36.80994661699727 39.0 35.0 41.0 30.0 41.0 30 36.60793050560969 39.0 35.0 40.0 30.0 41.0 31 36.26347763858014 38.0 35.0 40.0 30.0 41.0 32 36.075362688322464 38.0 35.0 40.0 30.0 41.0 33 35.8585509427029 38.0 35.0 40.0 30.0 41.0 34 35.6380566640964 38.0 35.0 40.0 29.0 41.0 35 35.38458565456487 38.0 34.0 40.0 27.0 41.0 36 35.225419996026375 38.0 34.0 40.0 25.0 41.0 37 35.012249470749694 38.0 34.0 40.0 25.0 41.0 38 34.8187576255123 38.0 34.0 40.0 24.0 41.0 39 34.62203442484782 38.0 33.0 40.0 23.0 41.0 40 34.34794813414977 38.0 33.0 40.0 21.0 41.0 41 34.12285537775113 38.0 33.0 40.0 20.0 41.0 42 33.72002665752715 37.0 33.0 40.0 18.0 41.0 43 33.271863833525266 37.0 33.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 2.0 12 4.0 13 10.0 14 8.0 15 23.0 16 55.0 17 117.0 18 256.0 19 650.0 20 1319.0 21 2804.0 22 5194.0 23 8923.0 24 14771.0 25 22783.0 26 33090.0 27 47096.0 28 64141.0 29 83311.0 30 103308.0 31 124185.0 32 149635.0 33 184033.0 34 226547.0 35 277164.0 36 367622.0 37 560924.0 38 645783.0 39 755499.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.7883208068142 20.901208150223646 15.643467533289973 20.66700350967219 2 18.413344418892816 25.21177486457199 35.365471490062816 21.009409226472382 3 20.098791577982645 24.55368075273812 34.592028127387536 20.7554995418917 4 12.730817411431264 15.90699871523113 35.8870708003591 35.475113072978516 5 11.705149485181943 40.00284296221442 34.09187334086926 14.200134211734367 6 31.419597576795994 37.73195215017363 12.496205080313683 18.35224519271669 7 24.203746350150208 35.20041116952562 20.578290042484074 20.0175524378401 8 28.76224328744278 33.4038003827399 18.15111784676325 19.68283848305407 9 23.99487288344045 14.339836179058786 22.71249579738975 38.95279514011102 10 16.871975105870447 28.809236420031088 31.474826058819964 22.843962415278504 11 32.09016701995319 23.02793957808375 23.60911606977597 21.27277733218709 12 21.92951247546722 29.058416894044754 30.43684587747377 18.57522475301426 13 33.510859925403494 20.989187774392736 26.430008634886192 19.069943665317574 14 19.916662612410484 24.036593218040252 30.020512271350142 26.02623189819912 15 21.855530227401644 30.788247966099714 26.93054393259951 20.425677873899133 16 19.97091263707576 28.661054488931338 27.891443417577605 23.476589456415297 17 20.77718868000938 26.937121340399607 28.122141919260418 24.163548060330594 18 22.621689518628877 24.73752201868799 31.830957358012927 20.809831104670202 19 21.90401822539907 24.03917525829236 34.196214946425386 19.86059156988319 20 22.986463857823622 23.783498914591817 33.324137646119695 19.905899581464865 21 21.18384643003038 24.997383985534054 34.55479238901508 19.26397719542049 22 19.361252164497163 25.75234537587847 33.80687045577903 21.07953200384534 23 20.828666408825033 25.829534789730875 34.60382397443399 18.7379748270101 24 20.44206703465723 26.055803053928493 32.11337820285106 21.388751708563213 25 20.319297815512407 26.215590576477176 33.53814801396259 19.926963594047827 26 19.733826983190376 27.70866214709965 33.46250782426145 19.09500304544853 27 18.505754280547098 27.38052560011372 33.15179325413446 20.961926865204724 28 19.210515372516383 27.144581479813475 33.00453542165125 20.640367726018894 29 19.460837380115194 26.943454133860033 31.920377488848985 21.67533099717579 30 19.34296044776383 27.45488835937434 34.483500898685904 18.718650294175923 31 20.608758117458915 27.160562950005453 33.87199222887422 18.358686703661416 32 19.812049213143617 27.068071550237942 32.509734971234714 20.610144265383727 33 19.262237715671706 26.95234178820149 33.443754058219845 20.341666437906962 34 18.178650549662013 27.931043761233575 34.10220150187769 19.78810418722673 35 17.59410381595652 30.777403397040874 32.428441472350016 19.20005131465259 36 20.72138943119284 27.752747086982954 32.24742686099192 19.27843662083228 37 19.5045961675456 29.11394434915055 31.84373166241808 19.53772782088577 38 19.133815187343327 26.932854179140865 33.59636622680478 20.336964406711022 39 18.51681628457454 26.71607151544835 34.46640507427986 20.300707125697254 40 17.08011472956118 27.355520578724914 34.104702004016566 21.45966268769734 41 18.938830379252792 26.193439389051225 34.241387061151684 20.626343170544303 42 17.732963222777617 28.520564319845754 33.13178923702341 20.614683220353218 43 17.79096400065122 28.530403252174825 32.25517298174824 21.42345976542572 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1115.0 1 1125.5 2 1136.0 3 3409.5 4 5683.0 5 5683.0 6 8884.0 7 12085.0 8 13014.0 9 13943.0 10 21063.0 11 28183.0 12 28183.0 13 51594.0 14 75005.0 15 127621.5 16 180238.0 17 159347.0 18 138456.0 19 138456.0 20 135983.5 21 133511.0 22 98355.5 23 63200.0 24 68149.5 25 73099.0 26 73099.0 27 77779.5 28 82460.0 29 84622.0 30 86784.0 31 90414.0 32 94044.0 33 94044.0 34 102245.5 35 110447.0 36 122325.0 37 134203.0 38 140377.5 39 146552.0 40 146552.0 41 152777.5 42 159003.0 43 171610.0 44 184217.0 45 206337.5 46 228458.0 47 228458.0 48 332246.0 49 436034.0 50 397162.5 51 358291.0 52 315598.0 53 272905.0 54 272905.0 55 236903.5 56 200902.0 57 165205.0 58 129508.0 59 112870.5 60 96233.0 61 96233.0 62 84336.0 63 72439.0 64 62772.0 65 53105.0 66 45274.5 67 37444.0 68 37444.0 69 31866.5 70 26289.0 71 22041.5 72 17794.0 73 14705.5 74 11617.0 75 11617.0 76 9184.5 77 6752.0 78 5261.5 79 3771.0 80 2967.5 81 2164.0 82 2164.0 83 1637.5 84 1111.0 85 824.5 86 538.0 87 407.0 88 276.0 89 276.0 90 223.5 91 171.0 92 114.5 93 58.0 94 41.5 95 25.0 96 25.0 97 16.5 98 8.0 99 6.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3679261.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.179799686090476 #Duplication Level Percentage of deduplicated Percentage of total 1 76.0642845629149 28.280548633149603 2 12.357911634170819 9.189293581937559 3 4.431173690335754 4.942504505428729 4 2.095147971899957 3.115887276318365 5 1.1769377706440316 2.187915527776949 6 0.6934265989029704 1.5468877226531668 7 0.5060250260213784 1.3169736372536498 8 0.36471081398168875 1.0847900005752154 9 0.2577341762575251 0.8624254540962887 >10 1.7160069886878175 12.382939516155126 >50 0.1835309323242606 4.771039887580199 >100 0.13151332949356478 9.264091757840736 >500 0.012193944641720994 3.09770800229726 >1k 0.008006867264669112 6.8260897114892956 >5k 5.876599827280083E-4 1.4896156817907351 >10k+ 8.080324762510113E-4 9.641289103657265 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 98339 2.6727921721236956 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 67831 1.8436039193740266 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 67089 1.8234368260365328 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 29505 0.8019273435616555 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 15728 0.4274771482642846 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 14348 0.3899696161810755 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 12713 0.34553134447379513 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 12679 0.3446072458572523 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12551 0.3411282863596793 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 11645 0.31650377616592024 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 10586 0.2877208221977185 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8743 0.23762924130688198 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 8727 0.23719437136968538 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 7114 0.1933540458260504 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6525 0.17734539626299956 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 6417 0.1744100241869223 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6247 0.16978953110420814 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 5555 0.15098140632045404 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5214 0.14171324078395092 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 4988 0.13557070292104853 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4951 0.13456506619128136 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4932 0.13404865814086034 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4927 0.1339127612854864 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 4869 0.13233635776314864 No Hit GTACGGGAAGCAGTGGTATCAACAAAAAAAAAAAAAAAAAAAA 4864 0.13220046090777468 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4796 0.13035226367468902 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4689 0.12744407096968657 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 4618 0.12551433562337655 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 4578 0.12442716078038497 No Hit GAGTACGGGAAGCAGTGGTATCAACAAAAAAAAAAAAAAAAAA 4514 0.12268768103159847 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 4492 0.1220897348679531 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4463 0.12130153310678422 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4309 0.11711590996126668 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4133 0.11233234065210378 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 3965 0.10776620631153919 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3793 0.10309135448667545 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.7179371074789204E-5 2 0.0 0.0 0.0 0.0 2.7179371074789204E-5 3 0.0 0.0 0.0 0.0 2.7179371074789204E-5 4 0.0 0.0 0.0 0.0 2.7179371074789204E-5 5 0.0 0.0 0.0 0.0 2.7179371074789204E-5 6 2.7179371074789204E-5 0.0 0.0 2.7179371074789204E-5 5.435874214957841E-5 7 2.7179371074789204E-5 0.0 0.0 2.7179371074789204E-5 5.435874214957841E-5 8 5.435874214957841E-5 0.0 0.0 8.153811322436762E-5 5.435874214957841E-5 9 1.35896855373946E-4 0.0 0.0 1.6307622644873523E-4 5.435874214957841E-5 10 1.35896855373946E-4 0.0 0.0 1.9025559752352443E-4 5.435874214957841E-5 11 1.6307622644873523E-4 0.0 0.0 2.71793710747892E-4 5.435874214957841E-5 12 1.6307622644873523E-4 0.0 0.0 4.892286793462057E-4 5.435874214957841E-5 13 1.6307622644873523E-4 0.0 0.0 5.979461636453625E-4 5.435874214957841E-5 14 1.6307622644873523E-4 0.0 0.0 8.697398743932545E-4 5.435874214957841E-5 15 1.9025559752352443E-4 0.0 0.0 0.0012774304405150925 5.435874214957841E-5 16 1.9025559752352443E-4 0.0 0.0 0.0022015290570579255 5.435874214957841E-5 17 1.9025559752352443E-4 0.0 0.0 0.003370242013273861 5.435874214957841E-5 18 1.9025559752352443E-4 0.0 0.0 0.0041856231455175376 5.435874214957841E-5 19 2.1743496859831364E-4 0.0 0.0 0.006359972831500674 5.435874214957841E-5 20 2.1743496859831364E-4 0.0 0.0 0.009974829184447637 5.435874214957841E-5 21 2.1743496859831364E-4 0.0 0.0 0.018318896104407924 5.435874214957841E-5 22 2.1743496859831364E-4 0.0 0.0 0.030332178119464752 5.435874214957841E-5 23 2.1743496859831364E-4 0.0 0.0 0.036746509693115006 5.435874214957841E-5 24 2.1743496859831364E-4 0.0 0.0 0.0468300563618618 5.435874214957841E-5 25 2.1743496859831364E-4 0.0 0.0 0.054086948438830516 5.435874214957841E-5 26 2.1743496859831364E-4 0.0 0.0 0.06544792554809241 5.435874214957841E-5 27 2.1743496859831364E-4 0.0 0.0 0.11964359147122207 5.435874214957841E-5 28 2.1743496859831364E-4 0.0 0.0 0.260840424204752 5.435874214957841E-5 29 2.1743496859831364E-4 0.0 0.0 0.502465033059628 5.435874214957841E-5 30 2.1743496859831364E-4 0.0 0.0 0.8181806074643794 5.435874214957841E-5 31 2.1743496859831364E-4 0.0 0.0 1.182628794206228 5.435874214957841E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTGG 1675 0.0 20.65373 1 ACGTTTA 185 0.0 20.0 26 ATTGGAC 1835 0.0 19.861034 3 GGTATCA 24755 0.0 19.280954 1 CGAATTA 205 0.0 18.04878 15 TTGGACC 2480 0.0 17.977821 4 TATTGGA 2025 0.0 17.44938 2 TGGACCC 2550 0.0 17.339216 5 GGACCCT 2490 0.0 17.311245 6 TTCGTTA 430 0.0 17.209303 30 CAGTCGA 65 0.0015808275 17.076923 26 TCACGTT 235 0.0 16.531914 24 TATACAC 2260 0.0 16.289824 37 TATACCG 195 1.8189894E-12 16.128206 5 CGTTCGC 515 0.0 15.805826 23 TAGTACT 535 0.0 15.560747 4 ACTCTGT 2025 0.0 15.439506 37 ACGTTCG 505 0.0 15.386138 22 TATACTG 350 0.0 15.328571 5 CGACGAA 590 0.0 15.050847 10 >>END_MODULE