##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088545_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1043565 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.699180213978046 31.0 31.0 34.0 30.0 34.0 2 31.84276781992497 31.0 31.0 34.0 30.0 34.0 3 31.961890251206203 33.0 31.0 34.0 30.0 34.0 4 35.63223277898358 37.0 35.0 37.0 33.0 37.0 5 35.55493716251503 37.0 35.0 37.0 33.0 37.0 6 35.61359761969786 37.0 35.0 37.0 33.0 37.0 7 35.46356575776305 37.0 35.0 37.0 33.0 37.0 8 35.514978942375414 37.0 35.0 37.0 33.0 37.0 9 37.09857843066795 39.0 37.0 39.0 33.0 39.0 10 36.962354045986594 39.0 37.0 39.0 33.0 39.0 11 37.029504630760904 39.0 37.0 39.0 33.0 39.0 12 36.87961459037051 39.0 37.0 39.0 32.0 39.0 13 36.93744615812144 39.0 37.0 39.0 33.0 39.0 14 37.938501195421466 40.0 37.0 41.0 33.0 41.0 15 37.948861834193366 40.0 37.0 41.0 33.0 41.0 16 37.83703937943492 40.0 37.0 41.0 32.0 41.0 17 37.88589115196466 40.0 37.0 41.0 33.0 41.0 18 37.86767858255116 40.0 37.0 41.0 33.0 41.0 19 37.9310354410123 40.0 37.0 41.0 32.0 41.0 20 37.8427841102375 40.0 37.0 41.0 32.0 41.0 21 37.70147810629908 40.0 37.0 41.0 32.0 41.0 22 37.594536995778896 39.0 37.0 41.0 32.0 41.0 23 37.40720702591597 39.0 36.0 41.0 32.0 41.0 24 37.55563572944666 39.0 36.0 41.0 32.0 41.0 25 37.50355464202038 39.0 36.0 41.0 32.0 41.0 26 37.2905061016803 39.0 36.0 41.0 31.0 41.0 27 37.245756613148195 39.0 36.0 41.0 31.0 41.0 28 37.09421262690872 39.0 36.0 41.0 31.0 41.0 29 36.87924757921164 39.0 35.0 41.0 30.0 41.0 30 36.73259451974721 39.0 35.0 41.0 30.0 41.0 31 36.45898530517984 39.0 35.0 40.0 30.0 41.0 32 36.29869533761673 38.0 35.0 40.0 30.0 41.0 33 36.11294265330861 38.0 35.0 40.0 30.0 41.0 34 35.91645082002559 38.0 35.0 40.0 29.0 41.0 35 35.70307934819585 38.0 35.0 40.0 27.0 41.0 36 35.62254483429398 38.0 35.0 40.0 27.0 41.0 37 35.47221016419677 38.0 35.0 40.0 26.0 41.0 38 35.33697469731162 38.0 34.0 40.0 25.0 41.0 39 35.20403712274751 38.0 34.0 40.0 25.0 41.0 40 35.0033510131137 38.0 34.0 40.0 24.0 41.0 41 34.8590849635624 38.0 34.0 40.0 23.0 41.0 42 34.5487487602593 38.0 33.0 40.0 22.0 41.0 43 34.14985362675061 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 0.0 13 2.0 14 3.0 15 10.0 16 20.0 17 23.0 18 77.0 19 181.0 20 323.0 21 697.0 22 1301.0 23 2326.0 24 3789.0 25 5862.0 26 8684.0 27 12184.0 28 16576.0 29 21772.0 30 27484.0 31 33613.0 32 41065.0 33 50190.0 34 62830.0 35 77181.0 36 101942.0 37 149737.0 38 195500.0 39 230190.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.64350088398902 21.153066651334605 14.695490937315835 22.50794152736054 2 18.296416610369263 23.988155984533783 35.66773511951819 22.04769228557876 3 19.41048233698907 24.746517945695764 33.331895952815586 22.511103764499577 4 13.229266983848634 16.278909315663135 36.47707617637617 34.01474752411206 5 12.207193610364472 39.12779750183266 34.878038263069385 13.786970624733485 6 31.734199594658698 38.13552581774973 13.525175719768296 16.60509886782328 7 25.360854378979745 33.88519162677936 21.53157685434065 19.222377139900246 8 27.46019653782946 34.453436058127664 18.93288870362651 19.15347870041636 9 24.478398566452498 14.542266174124277 21.987801430672743 38.991533828750484 10 16.356432038253487 28.201980710353453 32.94859448141707 22.492992769975995 11 32.99123677011015 22.882906191756145 23.500979814386262 20.624877223747443 12 21.20778293637675 28.100405820432844 30.891990436628287 19.79982080656212 13 31.878033471800986 21.044783985664527 26.372482787368302 20.704699755166185 14 20.281534930742215 22.9590873591966 28.887707042685413 27.871670667375774 15 22.334210135449155 30.077762286009975 25.936285712916778 21.651741865624086 16 21.125277294658215 28.406088743873166 27.01096721335039 23.457666748118232 17 21.343088355780427 26.94724334373039 27.643127165054405 24.066541135434782 18 22.671515430279857 25.530561105441446 30.303718503399406 21.494204960879294 19 22.617565748180514 24.702725752588485 31.74972330425033 20.929985194980667 20 23.323127931657346 24.629610996919215 31.27519608265896 20.772064988764473 21 22.005720774460624 25.46559150603939 31.99484459520969 20.533843124290293 22 20.71936103644718 25.903609262480053 31.55404790310139 21.822981797971376 23 21.663432560501743 25.93935212468797 32.27120495608802 20.126010358722265 24 21.523048396602032 26.10436340812503 30.233670159501326 22.13891803577161 25 21.4658406519958 26.22232443594793 31.290432316147054 21.021402595909215 26 21.055133125392285 27.23922323956821 31.150527279086592 20.55511635595291 27 20.011786520245504 27.1644794526455 30.97727501401446 21.846459013094535 28 20.63053092045057 26.68420270898315 30.988774058156416 21.696492312409866 29 20.841730031191158 26.676919981026575 30.243444347021985 22.237905640760278 30 20.856103836368604 26.99266456809111 31.792748894414817 20.358482701125467 31 21.61686143172682 26.69493515018231 31.632528879370238 20.055674538720638 32 21.002716649178538 26.557425747318085 30.724775169730684 21.715082433772693 33 20.60216661156708 26.51363355421081 31.440686492935278 21.443513341286838 34 19.90685774245016 27.017866639835564 31.99800683234873 21.07726878536555 35 19.615356973451583 28.908213671405232 30.783899421693906 20.692529933449283 36 21.69265929769588 26.78280701250042 30.583624402888177 20.940909286915524 37 20.703741501487688 27.46795839262528 30.570879628964175 21.257420476922857 38 20.484205583744185 26.09113950736178 31.798977543325048 21.625677365568986 39 20.000670777574946 25.86393756019031 32.58407478211707 21.551316880117675 40 18.936146766133398 26.35715072851236 32.38581209603618 22.320890409318057 41 20.17909761251096 25.545797338929532 32.331287461729744 21.943817586829763 42 19.17245212325059 27.372899627718443 31.58720348037736 21.867444768653606 43 19.311398906632554 27.180961415915633 30.996056786112984 22.511582891338826 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 293.0 1 284.5 2 276.0 3 745.5 4 1215.0 5 1215.0 6 1766.5 7 2318.0 8 2546.5 9 2775.0 10 4112.0 11 5449.0 12 5449.0 13 10033.5 14 14618.0 15 24511.5 16 34405.0 17 30744.0 18 27083.0 19 27083.0 20 27195.5 21 27308.0 22 21194.0 23 15080.0 24 16731.5 25 18383.0 26 18383.0 27 20401.0 28 22419.0 29 24183.0 30 25947.0 31 27987.0 32 30027.0 33 30027.0 34 34003.5 35 37980.0 36 41715.5 37 45451.0 38 48283.0 39 51115.0 40 51115.0 41 53269.5 42 55424.0 43 58646.0 44 61868.0 45 66763.0 46 71658.0 47 71658.0 48 91627.0 49 111596.0 50 103039.5 51 94483.0 52 85004.0 53 75525.0 54 75525.0 55 67027.0 56 58529.0 57 49918.5 58 41308.0 59 36790.5 60 32273.0 61 32273.0 62 28467.0 63 24661.0 64 21283.0 65 17905.0 66 15142.5 67 12380.0 68 12380.0 69 10582.5 70 8785.0 71 7388.0 72 5991.0 73 4918.5 74 3846.0 75 3846.0 76 3094.0 77 2342.0 78 1828.0 79 1314.0 80 1026.0 81 738.0 82 738.0 83 558.0 84 378.0 85 291.5 86 205.0 87 148.0 88 91.0 89 91.0 90 79.5 91 68.0 92 49.5 93 31.0 94 24.0 95 17.0 96 17.0 97 11.0 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1043565.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.111394108155906 #Duplication Level Percentage of deduplicated Percentage of total 1 83.80282738665609 46.18490647483765 2 9.169388515847972 10.106755684553928 3 2.610116504858224 4.315414781023321 4 1.2416228216670722 2.737102586342984 5 0.6989080184971734 1.9258897626374023 6 0.44237265141512555 1.4627864120885317 7 0.3214001042807766 1.23989654693942 8 0.2387605472470371 1.0526741293448354 9 0.178864524906004 0.8871725991656568 >10 1.1521004792176486 11.903200946608266 >50 0.08500147129565046 3.2133967557098595 >100 0.04921317503624018 4.96439609706823 >500 0.006108017918965714 2.447814517833144 >1k 0.0026177219652710197 2.766643056068061 >5k 1.7451479768473466E-4 0.5463845929751323 >10k+ 5.23544393054204E-4 4.245565056803602 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18471 1.7699903695505312 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12939 1.2398844346063733 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12733 1.2201444088293494 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5681 0.5443839147537528 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3232 0.3097075888900068 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2774 0.2658195704148759 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2764 0.26486131673637964 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2698 0.258536842458304 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2577 0.24694197294849862 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2573 0.24655867147710012 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1875 0.17967256471805781 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1734 0.16616118785125988 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1559 0.14939174847757447 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1443 0.1382760058070173 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1235 0.11834432929429407 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1220 0.11690694877654961 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.582536784963083E-5 2 0.0 0.0 0.0 0.0 9.582536784963083E-5 3 0.0 0.0 0.0 0.0 9.582536784963083E-5 4 0.0 0.0 0.0 0.0 9.582536784963083E-5 5 0.0 0.0 0.0 0.0 9.582536784963083E-5 6 0.0 0.0 0.0 0.0 1.9165073569926165E-4 7 0.0 0.0 0.0 9.582536784963083E-5 1.9165073569926165E-4 8 0.0 0.0 0.0 9.582536784963083E-5 1.9165073569926165E-4 9 0.0 0.0 0.0 9.582536784963083E-5 1.9165073569926165E-4 10 0.0 0.0 0.0 2.874761035488925E-4 1.9165073569926165E-4 11 0.0 0.0 0.0 9.582536784963083E-4 1.9165073569926165E-4 12 0.0 0.0 0.0 0.00114990441419557 1.9165073569926165E-4 13 0.0 0.0 0.0 0.0012457297820452008 2.874761035488925E-4 14 0.0 0.0 0.0 0.0015332058855940932 2.874761035488925E-4 15 0.0 0.0 0.0 0.002203983460541509 2.874761035488925E-4 16 0.0 0.0 0.0 0.0027789356676392943 2.874761035488925E-4 17 0.0 0.0 0.0 0.004216316185383756 2.874761035488925E-4 18 0.0 0.0 0.0 0.005078744496030434 2.874761035488925E-4 19 0.0 0.0 0.0 0.007474378692271205 2.874761035488925E-4 20 0.0 0.0 0.0 0.013128075395399424 4.791268392481542E-4 21 0.0 0.0 0.0 0.02203983460541509 4.791268392481542E-4 22 0.0 0.0 0.0 0.03785102030060418 4.791268392481542E-4 23 0.0 0.0 0.0 0.04839181076406357 4.791268392481542E-4 24 0.0 0.0 0.0 0.061328235423763734 4.791268392481542E-4 25 0.0 0.0 0.0 0.06937756632313272 5.74952207097785E-4 26 0.0 0.0 0.0 0.07972670605089285 5.74952207097785E-4 27 0.0 0.0 0.0 0.1286934690220542 5.74952207097785E-4 28 0.0 0.0 0.0 0.26371141232218404 5.74952207097785E-4 29 9.582536784963083E-5 0.0 0.0 0.45392476750370125 5.74952207097785E-4 30 9.582536784963083E-5 0.0 0.0 0.7199359886542764 5.74952207097785E-4 31 9.582536784963083E-5 0.0 0.0 1.0765021824227528 5.74952207097785E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTGG 435 0.0 20.839079 1 GGTATCA 4760 0.0 20.754202 1 TAGACTG 100 1.2894816E-8 20.35 5 GTACTAG 110 1.7535058E-9 20.181818 1 CTCTAAT 140 3.6379788E-12 19.82143 1 ATTGGAC 500 0.0 18.869999 3 TCGTTAT 60 9.236037E-4 18.5 13 TGGACCC 580 0.0 18.5 5 CAATACG 50 0.0070344587 18.5 4 CTAGGCA 135 1.1514203E-9 17.814814 4 TTGGACC 655 0.0 17.793892 4 CGGAACT 85 2.7227261E-5 17.411764 4 GGACCCT 620 0.0 17.306452 6 CTAGGAC 75 2.0670365E-4 17.266666 3 TAGGCAT 100 5.8767473E-6 16.650002 5 AGTACCG 100 5.8767473E-6 16.650002 5 GTTCTAT 90 4.445326E-5 16.444445 1 CTCTATA 80 3.3821928E-4 16.1875 2 TTCGTTA 115 1.2418495E-6 16.086956 30 GACCCTC 670 0.0 16.014925 7 >>END_MODULE