##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088544_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1650195 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.704440384318218 31.0 31.0 34.0 30.0 34.0 2 31.8520526362036 31.0 31.0 34.0 30.0 34.0 3 31.978215301827966 33.0 31.0 34.0 30.0 34.0 4 35.64779980547753 37.0 35.0 37.0 33.0 37.0 5 35.56326979538782 37.0 35.0 37.0 33.0 37.0 6 35.61697617554289 37.0 35.0 37.0 33.0 37.0 7 35.46551710555419 37.0 35.0 37.0 33.0 37.0 8 35.510391802180955 37.0 35.0 37.0 33.0 37.0 9 37.105869306354705 39.0 37.0 39.0 33.0 39.0 10 36.96577495386909 39.0 37.0 39.0 33.0 39.0 11 37.03323304215562 39.0 37.0 39.0 33.0 39.0 12 36.88549898648341 39.0 37.0 39.0 32.0 39.0 13 36.94195292071543 39.0 37.0 39.0 33.0 39.0 14 37.934953747890404 40.0 37.0 41.0 33.0 41.0 15 37.945368880647436 40.0 37.0 41.0 33.0 41.0 16 37.84266707873918 40.0 37.0 41.0 32.0 41.0 17 37.89310111835268 40.0 37.0 41.0 33.0 41.0 18 37.87564196958541 40.0 37.0 41.0 33.0 41.0 19 37.94691354658086 40.0 37.0 41.0 33.0 41.0 20 37.84217683364693 40.0 37.0 41.0 32.0 41.0 21 37.712394595790194 40.0 37.0 41.0 32.0 41.0 22 37.59345592490585 39.0 37.0 41.0 32.0 41.0 23 37.4149873196804 39.0 36.0 41.0 32.0 41.0 24 37.55462839240211 39.0 36.0 41.0 32.0 41.0 25 37.50629592260309 39.0 36.0 41.0 32.0 41.0 26 37.29184672114508 39.0 36.0 41.0 31.0 41.0 27 37.23985225988444 39.0 36.0 41.0 31.0 41.0 28 37.07981844569884 39.0 36.0 41.0 31.0 41.0 29 36.8431979250937 39.0 35.0 41.0 30.0 41.0 30 36.66363611573178 39.0 35.0 40.0 30.0 41.0 31 36.4032820363654 38.0 35.0 40.0 30.0 41.0 32 36.2376028287566 38.0 35.0 40.0 30.0 41.0 33 36.05118728392705 38.0 35.0 40.0 30.0 41.0 34 35.84172355388303 38.0 35.0 40.0 29.0 41.0 35 35.630946645699446 38.0 35.0 40.0 27.0 41.0 36 35.54358363708531 38.0 35.0 40.0 27.0 41.0 37 35.373302549092685 38.0 34.0 40.0 26.0 41.0 38 35.22181257366554 38.0 34.0 40.0 25.0 41.0 39 35.058639736515985 38.0 34.0 40.0 24.0 41.0 40 34.86126245686116 38.0 34.0 40.0 24.0 41.0 41 34.70745942146231 38.0 34.0 40.0 23.0 41.0 42 34.392797214874605 38.0 33.0 40.0 21.0 41.0 43 33.978673429503786 38.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 5.0 15 10.0 16 21.0 17 50.0 18 113.0 19 270.0 20 529.0 21 1108.0 22 2144.0 23 3732.0 24 6221.0 25 9512.0 26 14000.0 27 19795.0 28 26858.0 29 35108.0 30 43672.0 31 53681.0 32 65830.0 33 80411.0 34 99911.0 35 123441.0 36 161215.0 37 236830.0 38 302967.0 39 362759.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.43716348673945 21.213189956338493 15.005862943470316 22.34378361345174 2 18.299837291956404 24.196837343465468 35.71038574229106 21.792939622287065 3 19.151918409642494 24.560006544681084 33.72207526989235 22.565999775784075 4 13.266068555534346 16.441087265444388 36.3384933295762 33.95435084944506 5 12.08887434515315 39.300931102081876 34.69268783386206 13.917506718902917 6 31.480764394510953 38.310260302570306 13.571305209384347 16.6376700935344 7 24.86712176439754 34.51525425783014 21.31057238689973 19.307051590872593 8 27.371734855577674 34.50640681858811 18.95297222449468 19.168886101339538 9 24.53031308421126 14.679416674999016 22.10890228124555 38.681367959544176 10 16.382185135696083 28.53014340729429 32.67480509879135 22.412866358218274 11 32.75824978260145 23.182593572274794 23.517826681089204 20.541329964034556 12 21.32214677659307 28.335317947272898 30.75272922291002 19.589806053224013 13 31.975312008580804 21.451767821378688 26.17581558543081 20.3971045846097 14 20.09913979862986 23.51437254385088 28.949669584503653 27.436818073015612 15 22.138838137311044 30.69897799956975 25.852581058602166 21.30960280451704 16 20.958310987489355 28.86149818657795 26.928211514396782 23.25197931153591 17 21.186890034208076 27.57025684843306 27.569347864949297 23.673505252409562 18 22.449225697569076 25.929541660228033 30.473368298898006 21.14786434330488 19 22.386202842694345 25.235138877526598 32.02463951230006 20.354018767478994 20 23.043458500359048 25.114122876387334 31.279818445698844 20.562600177554774 21 21.758761843297307 25.892758128584802 32.11590145407058 20.23257857404731 22 20.494244619575262 26.385548374586033 31.54742318332076 21.572783822517945 23 21.51582085753502 26.366883913719285 32.125173085605034 19.99212214314066 24 21.14762194770921 26.553770917982423 30.391802180954375 21.906804953353998 25 21.13756253048882 26.69351197888734 31.518578107435786 20.65034738318805 26 20.59580837416184 27.767082072118747 31.32666139456246 20.310448159156948 27 19.638042776762745 27.558864255436475 31.13001796757353 21.673075000227247 28 20.24251679346986 27.343980559873227 31.03633206984629 21.37717057681062 29 20.470247455603733 27.159820506061404 30.36489626983478 22.005035768500086 30 20.557449271146744 27.508203575941025 32.05318159369045 19.881165559221788 31 21.404379482424805 27.21538969636922 31.56784501225613 19.812385808949852 32 20.64422689439733 27.227145882759313 30.788421974372724 21.340205248470635 33 20.30366108247813 26.83949472638082 31.549725941479643 21.307118249661404 34 19.594047976148275 27.245386151333626 32.326603825608494 20.83396204690961 35 19.18773235890304 29.096743112177652 31.130199764270284 20.585324764649027 36 21.278879162765612 27.04722775187175 30.927557046288467 20.74633603907417 37 20.37450119531328 27.598071743036428 30.952463193743768 21.074963867906522 38 20.020785422328878 26.188904947597102 32.32951257275655 21.460797057317468 39 19.45285254166932 26.05692054575368 33.09324049582019 21.396986416756807 40 18.393523189683645 26.373973984892697 33.02476374004284 22.20773908538082 41 19.487393914052582 25.51195464778405 33.16668636130882 21.833965076854554 42 18.64773557064468 27.23290277815652 32.31157529867683 21.807786352521973 43 18.552837694939083 27.148246116368064 31.88907977542048 22.409836413272373 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 569.0 1 524.5 2 480.0 3 1164.5 4 1849.0 5 1849.0 6 2796.0 7 3743.0 8 4093.5 9 4444.0 10 6756.5 11 9069.0 12 9069.0 13 16194.5 14 23320.0 15 40222.5 16 57125.0 17 51529.5 18 45934.0 19 45934.0 20 46167.5 21 46401.0 22 36724.5 23 27048.0 24 29852.5 25 32657.0 26 32657.0 27 35692.5 28 38728.0 29 40913.0 30 43098.0 31 46904.0 32 50710.0 33 50710.0 34 55708.0 35 60706.0 36 66284.0 37 71862.0 38 76199.0 39 80536.0 40 80536.0 41 83549.5 42 86563.0 43 91581.0 44 96599.0 45 103771.5 46 110944.0 47 110944.0 48 142787.0 49 174630.0 50 160885.5 51 147141.0 52 130768.0 53 114395.0 54 114395.0 55 101496.0 56 88597.0 57 75909.5 58 63222.0 59 56379.0 60 49536.0 61 49536.0 62 43280.5 63 37025.0 64 32270.5 65 27516.0 66 23338.0 67 19160.0 68 19160.0 69 16275.5 70 13391.0 71 11269.0 72 9147.0 73 7568.0 74 5989.0 75 5989.0 76 4783.5 77 3578.0 78 2783.5 79 1989.0 80 1594.0 81 1199.0 82 1199.0 83 917.5 84 636.0 85 489.0 86 342.0 87 251.0 88 160.0 89 160.0 90 126.5 91 93.0 92 69.0 93 45.0 94 29.0 95 13.0 96 13.0 97 8.5 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1650195.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.45945907200565 #Duplication Level Percentage of deduplicated Percentage of total 1 81.25112614653956 41.8113900049222 2 10.498195477981035 10.804629210581597 3 3.1815046349708873 4.911555226520419 4 1.446090396897218 2.9766011837421122 5 0.8305988126245339 2.1371082801754344 6 0.538072732346985 1.6613359048783156 7 0.36985736103040906 1.3322861812697047 8 0.2621726523484934 1.079301029866117 9 0.2112896891721552 0.9785567801062186 >10 1.2433494284785982 12.014724824812221 >50 0.09851332549063664 3.474904373847032 >100 0.059676553089334804 5.688023029370545 >500 0.0047174266816279705 1.765566026231773 >1k 0.004363619680505873 4.451481591436625 >5k 1.1793566704069926E-4 0.5293906382104961 >10k+ 3.5380700112209773E-4 4.383145714029195 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30085 1.8231178739482303 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 21081 1.2774853880904984 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21057 1.2760310145164662 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8723 0.528604195261772 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4985 0.3020855111062632 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4180 0.2533033974772678 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4060 0.24603152960710703 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4049 0.24536494171900897 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3569 0.2162774702383658 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3300 0.199976366429422 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3297 0.19979456973266796 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2764 0.1674953566093704 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2538 0.1538000054539009 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2055 0.12453073727650368 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2038 0.12350055599489758 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2013 0.12198558352194741 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1969 0.11931923196955511 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1790 0.10847202906323192 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1687 0.10223034247467723 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 6.059889891800666E-5 0.0 0.0 0.0 0.0 6 6.059889891800666E-5 0.0 0.0 0.0 0.0 7 6.059889891800666E-5 0.0 0.0 0.0 0.0 8 6.059889891800666E-5 0.0 0.0 0.0 0.0 9 6.059889891800666E-5 0.0 0.0 1.2119779783601332E-4 6.059889891800666E-5 10 6.059889891800666E-5 0.0 0.0 2.4239559567202664E-4 6.059889891800666E-5 11 1.8179669675401998E-4 0.0 0.0 6.665878880980732E-4 6.059889891800666E-5 12 1.8179669675401998E-4 0.0 0.0 0.00109078018052412 6.059889891800666E-5 13 1.8179669675401998E-4 0.0 0.0 0.0012119779783601333 6.059889891800666E-5 14 1.8179669675401998E-4 0.0 0.0 0.0015755713718681732 6.059889891800666E-5 15 1.8179669675401998E-4 0.0 0.0 0.00218156036104824 6.059889891800666E-5 16 1.8179669675401998E-4 0.0 0.0 0.002848148249146313 6.059889891800666E-5 17 1.8179669675401998E-4 0.0 0.0 0.003696532833998406 6.059889891800666E-5 18 1.8179669675401998E-4 0.0 0.0 0.003938928429670433 6.059889891800666E-5 19 1.8179669675401998E-4 0.0 0.0 0.005150906408030566 6.059889891800666E-5 20 1.8179669675401998E-4 0.0 0.0 0.00872624144419296 6.059889891800666E-5 21 1.8179669675401998E-4 0.0 0.0 0.016240504910025783 6.059889891800666E-5 22 1.8179669675401998E-4 0.0 0.0 0.027451301209857018 6.059889891800666E-5 23 1.8179669675401998E-4 0.0 0.0 0.03429897678759177 6.059889891800666E-5 24 1.8179669675401998E-4 0.0 0.0 0.044176597311226855 6.059889891800666E-5 25 1.8179669675401998E-4 0.0 0.0 0.04902450922466739 6.059889891800666E-5 26 1.8179669675401998E-4 0.0 0.0 0.05865973415263045 6.059889891800666E-5 27 1.8179669675401998E-4 0.0 0.0 0.11925863307063711 6.059889891800666E-5 28 1.8179669675401998E-4 0.0 0.0 0.2700892924775557 6.059889891800666E-5 29 1.8179669675401998E-4 0.0 0.0 0.4989107347919488 6.059889891800666E-5 30 1.8179669675401998E-4 0.0 0.0 0.8070561357900127 6.059889891800666E-5 31 1.8179669675401998E-4 0.0 0.0 1.2590633228194243 6.059889891800666E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7150 0.0 21.294407 1 GTCGACG 60 9.239142E-4 18.5 36 GTATTGG 545 0.0 17.651377 1 ATTGGAC 585 0.0 17.393162 3 TTGGACC 755 0.0 17.152319 4 TAGTACT 270 0.0 17.12963 4 TAGCACA 170 8.54925E-11 16.32353 4 CTGTCCG 80 3.3836826E-4 16.1875 9 CGTCTAT 70 0.0025931357 15.857142 27 TATACTG 175 1.3278623E-10 15.857142 5 GTATACT 130 2.5907684E-7 15.653846 4 GTCTTAC 95 7.062654E-5 15.578948 1 GACCCTC 755 0.0 15.437087 7 GGACCCT 770 0.0 15.136363 6 CGAACTA 125 2.9604507E-6 14.800001 29 CGTTTAG 90 8.2767074E-4 14.388888 26 TGGACCC 775 0.0 14.322579 5 CCCTCGC 785 0.0 14.140127 9 CTAGTAC 265 0.0 13.962263 3 TTATGGG 80 0.0063001546 13.875 2 >>END_MODULE