##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088538_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4263026 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.710555366070956 31.0 31.0 34.0 30.0 34.0 2 31.84747805901254 31.0 31.0 34.0 30.0 34.0 3 31.954079097805174 33.0 31.0 34.0 30.0 34.0 4 35.61969666617093 37.0 35.0 37.0 33.0 37.0 5 35.56097359012119 37.0 35.0 37.0 33.0 37.0 6 35.62997879909717 37.0 35.0 37.0 33.0 37.0 7 35.463094759450215 37.0 35.0 37.0 33.0 37.0 8 35.525685276139534 37.0 35.0 37.0 33.0 37.0 9 37.103877855776624 39.0 37.0 39.0 33.0 39.0 10 36.98719219634128 39.0 37.0 39.0 33.0 39.0 11 37.050150526879264 39.0 37.0 39.0 33.0 39.0 12 36.89191527332932 39.0 37.0 39.0 32.0 39.0 13 36.957749260736385 39.0 37.0 39.0 33.0 39.0 14 37.90294945421398 40.0 37.0 41.0 33.0 41.0 15 37.919696009360486 40.0 37.0 41.0 33.0 41.0 16 37.80669834056841 40.0 37.0 41.0 32.0 41.0 17 37.897325749362075 40.0 37.0 41.0 33.0 41.0 18 37.8902411104225 40.0 37.0 41.0 33.0 41.0 19 37.97026783322457 40.0 37.0 41.0 33.0 41.0 20 37.87862072621654 40.0 37.0 41.0 32.0 41.0 21 37.756986000085384 40.0 37.0 41.0 32.0 41.0 22 37.640383849406504 40.0 37.0 41.0 32.0 41.0 23 37.45729793813127 39.0 36.0 41.0 32.0 41.0 24 37.582151739163685 39.0 36.0 41.0 32.0 41.0 25 37.53086469564108 40.0 36.0 41.0 32.0 41.0 26 37.30236456451357 39.0 36.0 41.0 31.0 41.0 27 37.2598009019884 39.0 36.0 41.0 31.0 41.0 28 37.088257026816166 39.0 35.0 41.0 31.0 41.0 29 36.84426437933993 39.0 35.0 41.0 30.0 41.0 30 36.627395892025994 39.0 35.0 40.0 30.0 41.0 31 36.31924248174888 38.0 35.0 40.0 30.0 41.0 32 36.155251926683064 38.0 35.0 40.0 30.0 41.0 33 35.95109764753956 38.0 35.0 40.0 30.0 41.0 34 35.720993960627965 38.0 35.0 40.0 29.0 41.0 35 35.479512674799544 38.0 35.0 40.0 27.0 41.0 36 35.35234948133087 38.0 34.0 40.0 26.0 41.0 37 35.15703282128704 38.0 34.0 40.0 25.0 41.0 38 34.98616217681994 38.0 34.0 40.0 24.0 41.0 39 34.795965823337696 38.0 34.0 40.0 24.0 41.0 40 34.54371800688056 38.0 33.0 40.0 23.0 41.0 41 34.341248211950855 38.0 33.0 40.0 21.0 41.0 42 33.95927728331941 38.0 33.0 40.0 19.0 41.0 43 33.536824546695236 37.0 33.0 40.0 17.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 7.0 13 10.0 14 11.0 15 34.0 16 54.0 17 122.0 18 273.0 19 704.0 20 1450.0 21 3036.0 22 5682.0 23 10040.0 24 16445.0 25 25373.0 26 37283.0 27 52660.0 28 71765.0 29 93455.0 30 116708.0 31 140652.0 32 171614.0 33 211570.0 34 260185.0 35 321548.0 36 424753.0 37 636458.0 38 766720.0 39 894411.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.35015221582041 20.790654338021866 15.339268397612399 21.51992504854533 2 18.38958992978227 24.528984810320182 35.60466204053177 21.476763219365775 3 19.78411579005148 24.011113232713104 34.50466874938131 21.700102227854114 4 12.864195526839387 15.687659423142152 35.77672291935353 35.67142213066493 5 11.882920723448555 39.36602779340309 34.38548111130451 14.36557037184385 6 31.967386546551673 37.361958383551965 12.497413808876605 18.173241261019754 7 24.92145250814797 34.73917353541827 20.22858880053746 20.110785155896306 8 28.524831891712598 33.35454674684133 18.15553083654662 19.96509052489945 9 24.07428432291992 14.377627534995094 22.33995288792515 39.208135254159835 10 16.697106703078987 28.278011909849955 31.91538123389348 23.109500153177578 11 32.64408896403634 22.588672928572333 23.609379816121226 21.1578582912701 12 22.306056777509685 28.248385067320726 30.294326142979187 19.151232012190402 13 33.62566871513334 20.639564478377565 26.23582403672884 19.498942769760262 14 20.22556278099172 23.458665276730663 29.269420360091637 27.046351582185984 15 22.125832683169186 30.303193083973685 26.270025094850464 21.300949138006665 16 20.8219701216929 28.394337730992024 27.20600343511862 23.577688712196455 17 21.419245390480846 26.60424778080171 27.329601086176815 24.64690574254063 18 23.25737633314927 24.4094453095055 31.16377896827277 21.169399389072456 19 22.419192376495005 23.656412135417423 33.2936979507045 20.63069753738307 20 23.610013169049402 23.33321448191965 32.398324570387324 20.65844777864362 21 22.08726852709789 24.456102308547965 33.57626718673543 19.880361977618715 22 20.196147056105218 25.173315855920187 32.829074934096106 21.80146215387849 23 21.8425597216625 25.187460737982832 33.60936574161171 19.36061379874296 24 21.206837584382548 25.329988604338794 31.181348647650754 22.281825163627904 25 21.24580051822344 25.612252892663566 32.443104968161116 20.698841620951878 26 20.563046061647288 27.06424966678599 32.434378772261766 19.938325499304955 27 19.192306122458554 26.775065411282974 32.173671941010916 21.858956525247557 28 20.19431736986826 26.409878804398566 31.85734733965967 21.538456486073507 29 20.324623870461966 26.25142328477471 30.87192055596189 22.55203228880143 30 20.204497931750826 26.792189397859644 33.517975259827175 19.485337410562355 31 21.66327392795634 26.50903372393225 32.7469267135598 19.080765634551607 32 20.84852402964467 26.344432335153478 31.29530525969112 21.511738375510728 33 20.277122400848597 26.260290225769207 32.31589485966072 21.146692513721472 34 19.290405453778607 27.292420923541165 32.97577823827488 20.44139538440535 35 18.48989426759302 30.20089485731497 31.41702630948064 19.892184565611377 36 21.685652398085303 27.191014082485072 31.154325589381816 19.96900793004781 37 20.497951455140083 28.53620878690395 30.81022728925416 20.155612468701808 38 20.15361857985384 26.33971737446593 32.55312071753726 20.953543328142967 39 19.650736354880312 26.012508485756364 33.38332911879965 20.953426040563674 40 18.044881734242296 26.693034478325963 33.07594183099047 22.18614195644127 41 19.98739862248084 25.549973188059372 33.27441587266885 21.188212316790935 42 18.630475160132733 27.984253438754536 32.2886372262332 21.096634174879533 43 18.686585538066154 28.11326977597603 31.303890710495313 21.8962539754625 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1251.0 1 1179.5 2 1108.0 3 3035.0 4 4962.0 5 4962.0 6 7884.5 7 10807.0 8 11706.5 9 12606.0 10 19201.5 11 25797.0 12 25797.0 13 48106.0 14 70415.0 15 124549.5 16 178684.0 17 160540.0 18 142396.0 19 142396.0 20 140619.5 21 138843.0 22 102956.5 23 67070.0 24 72088.0 25 77106.0 26 77106.0 27 83171.0 28 89236.0 29 92122.5 30 95009.0 31 100529.0 32 106049.0 33 106049.0 34 116589.0 35 127129.0 36 140382.5 37 153636.0 38 163002.5 39 172369.0 40 172369.0 41 178747.0 42 185125.0 43 198777.5 44 212430.0 45 238986.5 46 265543.0 47 265543.0 48 385719.5 49 505896.0 50 466518.0 51 427140.0 52 381389.0 53 335638.0 54 335638.0 55 293707.0 56 251776.0 57 208091.5 58 164407.0 59 145389.0 60 126371.0 61 126371.0 62 110786.5 63 95202.0 64 82828.5 65 70455.0 66 60429.0 67 50403.0 68 50403.0 69 43145.5 70 35888.0 71 30594.5 72 25301.0 73 20607.0 74 15913.0 75 15913.0 76 12740.0 77 9567.0 78 7520.5 79 5474.0 80 4261.5 81 3049.0 82 3049.0 83 2295.5 84 1542.0 85 1142.0 86 742.0 87 550.0 88 358.0 89 358.0 90 285.0 91 212.0 92 142.5 93 73.0 94 51.0 95 29.0 96 29.0 97 20.0 98 11.0 99 9.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4263026.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.93126402922119 #Duplication Level Percentage of deduplicated Percentage of total 1 74.92041381185649 28.418259974760385 2 12.63472149931269 9.58501914252214 3 4.747511898013283 5.402373818562325 4 2.3066124688552763 3.499709062769729 5 1.279390915233296 2.426445730115055 6 0.8235943740329176 1.874398539265425 7 0.5343508804101026 1.418802303035768 8 0.4006660037091596 1.215821437938004 9 0.29464484789178175 1.00586263682096 >10 1.751103826744587 12.585630724050215 >50 0.17229456553343667 4.530934581157148 >100 0.11661762800679165 8.360101987200261 >500 0.009690913209274059 2.5238726673094773 >1k 0.006709093752769803 5.704032338729905 >5k 9.939398152251562E-4 2.507943826383798 >10k+ 6.833336229672949E-4 8.940791229379359 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 99176 2.326422592777994 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 71074 1.667219482123731 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 70451 1.6526054497439144 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 28530 0.6692429274416811 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 19677 0.46157353954679137 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 18507 0.4341282459924007 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15748 0.36940895973892723 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 15210 0.3567888162070792 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 15209 0.3567653586912207 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13648 0.32014817643617466 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 12206 0.2863224385682846 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 9909 0.23244052464141668 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 9793 0.22971945280183606 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8806 0.20656688464954237 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 8041 0.18862188501782537 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 7082 0.16612612730956836 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 6273 0.1471489969800794 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 6101 0.14311430425242538 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6089 0.14283281406212395 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6069 0.14236366374495488 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5941 0.13936110171507282 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 5651 0.13255842211612126 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5574 0.13075219339502034 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 5461 0.1281014941030151 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 5350 0.12549770984272673 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 5198 0.1219321674322418 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 5096 0.11953950081467953 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 5000 0.11728757929226799 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4990 0.11705300413368344 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4929 0.11562209566631779 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4879 0.1144492198733951 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4817 0.11299485389017097 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 4708 0.11043798466159954 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAAAAAAA 4620 0.10837372326605561 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4489 0.10530078868859818 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 4350 0.10204019398427314 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.3457515858453595E-5 2.3457515858453595E-5 0.0 0.0 0.0 3 2.3457515858453595E-5 2.3457515858453595E-5 0.0 0.0 0.0 4 2.3457515858453595E-5 2.3457515858453595E-5 0.0 0.0 0.0 5 4.691503171690719E-5 4.691503171690719E-5 0.0 0.0 0.0 6 9.383006343381438E-5 4.691503171690719E-5 0.0 0.0 0.0 7 9.383006343381438E-5 4.691503171690719E-5 0.0 0.0 0.0 8 1.1728757929226798E-4 4.691503171690719E-5 0.0 0.0 0.0 9 1.4074509515072157E-4 4.691503171690719E-5 0.0 7.037254757536078E-5 0.0 10 1.6420261100917518E-4 4.691503171690719E-5 0.0 7.037254757536078E-5 0.0 11 1.8766012686762876E-4 7.037254757536078E-5 0.0 2.3457515858453596E-4 0.0 12 1.8766012686762876E-4 7.037254757536078E-5 0.0 3.7532025373525753E-4 0.0 13 1.8766012686762876E-4 7.037254757536078E-5 0.0 3.7532025373525753E-4 0.0 14 2.3457515858453596E-4 7.037254757536078E-5 0.0 5.629803806028863E-4 0.0 15 2.3457515858453596E-4 7.037254757536078E-5 0.0 9.85215666055051E-4 0.0 16 2.3457515858453596E-4 9.383006343381438E-5 0.0 0.0016185685942332981 0.0 17 2.3457515858453596E-4 9.383006343381438E-5 0.0 0.002369209101703813 0.0 18 2.3457515858453596E-4 9.383006343381438E-5 0.0 0.002885274450589792 0.0 19 2.580326744429896E-4 9.383006343381438E-5 0.0 0.00417543782280474 0.0 20 2.580326744429896E-4 9.383006343381438E-5 0.0 0.006685392019659275 0.0 21 2.580326744429896E-4 1.1728757929226798E-4 0.0 0.012244823278112778 0.0 22 2.580326744429896E-4 1.1728757929226798E-4 0.0 0.019282078035648857 0.0 23 2.580326744429896E-4 1.1728757929226798E-4 0.0 0.02362171846946277 0.0 24 2.580326744429896E-4 1.1728757929226798E-4 0.0 0.029908332719528335 0.0 25 2.580326744429896E-4 1.1728757929226798E-4 0.0 0.03459983589121905 0.0 26 2.580326744429896E-4 1.6420261100917518E-4 0.0 0.04266922134652709 0.0 27 2.580326744429896E-4 2.8149019030144313E-4 0.0 0.08808297204849325 0.0 28 2.580326744429896E-4 2.8149019030144313E-4 0.0 0.20792742056933267 0.0 29 2.580326744429896E-4 2.8149019030144313E-4 0.0 0.40382113550327864 0.0 30 2.580326744429896E-4 2.8149019030144313E-4 0.0 0.6692194699258226 0.0 31 2.580326744429896E-4 2.8149019030144313E-4 0.0 0.986974979744435 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTGG 1790 0.0 22.530727 1 ATTGGAC 1885 0.0 21.7878 3 GGTATCA 24760 0.0 20.569668 1 TTGGACC 2620 0.0 19.347328 4 TATTGGA 2120 0.0 19.285378 2 GGACCCT 2690 0.0 18.431229 6 TGGACCC 2770 0.0 18.03249 5 TATACCG 325 0.0 17.646154 5 GACCCTC 2855 0.0 16.65324 7 ACCGTTA 305 0.0 15.163934 8 GATACTG 2190 0.0 15.121004 36 TGATACT 2245 0.0 14.915368 35 ACTCTGT 2080 0.0 14.675481 37 GTCTATA 190 4.5656634E-10 14.605264 1 GATACCT 2205 0.0 14.51474 36 ATACTGT 2325 0.0 14.402151 37 TATACAC 2195 0.0 14.328019 37 CCCTCGC 3250 0.0 14.230769 9 GACCGTT 365 0.0 14.191782 7 ACGTTTA 235 3.6379788E-12 14.170212 26 >>END_MODULE