##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088536_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4570130 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.71963335835086 31.0 31.0 34.0 30.0 34.0 2 31.860621470286404 31.0 31.0 34.0 30.0 34.0 3 31.98148542820445 33.0 31.0 34.0 30.0 34.0 4 35.642225275867425 37.0 35.0 37.0 33.0 37.0 5 35.566335530936755 37.0 35.0 37.0 33.0 37.0 6 35.62618612599642 37.0 35.0 37.0 33.0 37.0 7 35.47796342773619 37.0 35.0 37.0 33.0 37.0 8 35.52383805274686 37.0 35.0 37.0 33.0 37.0 9 37.12167793913959 39.0 37.0 39.0 33.0 39.0 10 36.98162809373038 39.0 37.0 39.0 33.0 39.0 11 37.04843035099658 39.0 37.0 39.0 33.0 39.0 12 36.90376269384022 39.0 37.0 39.0 33.0 39.0 13 36.9615533912602 39.0 37.0 39.0 33.0 39.0 14 37.96561585775459 40.0 37.0 41.0 33.0 41.0 15 37.97174456744119 40.0 37.0 41.0 33.0 41.0 16 37.863562743291766 40.0 37.0 41.0 32.0 41.0 17 37.91330990584513 40.0 37.0 41.0 33.0 41.0 18 37.8935667037918 40.0 37.0 41.0 33.0 41.0 19 37.95933857461385 40.0 37.0 41.0 33.0 41.0 20 37.858407966512985 40.0 37.0 41.0 32.0 41.0 21 37.73476421896095 40.0 37.0 41.0 32.0 41.0 22 37.61863054223841 40.0 37.0 41.0 32.0 41.0 23 37.4551997426769 39.0 36.0 41.0 32.0 41.0 24 37.5946353823633 39.0 37.0 41.0 32.0 41.0 25 37.545960618188104 39.0 36.0 41.0 32.0 41.0 26 37.33627993076784 39.0 36.0 41.0 31.0 41.0 27 37.29158142109743 39.0 36.0 41.0 31.0 41.0 28 37.1363858358515 39.0 36.0 41.0 31.0 41.0 29 36.908543083019524 39.0 35.0 41.0 31.0 41.0 30 36.74355018347399 39.0 35.0 41.0 30.0 41.0 31 36.48860995201449 39.0 35.0 40.0 30.0 41.0 32 36.33451936815802 38.0 35.0 40.0 30.0 41.0 33 36.1603985006991 38.0 35.0 40.0 30.0 41.0 34 35.96715738939592 38.0 35.0 40.0 29.0 41.0 35 35.758635312343415 38.0 35.0 40.0 28.0 41.0 36 35.668493237610306 38.0 35.0 40.0 27.0 41.0 37 35.5115003293123 38.0 35.0 40.0 26.0 41.0 38 35.36044795224643 38.0 34.0 40.0 25.0 41.0 39 35.20800436749064 38.0 34.0 40.0 25.0 41.0 40 35.00562150310822 38.0 34.0 40.0 24.0 41.0 41 34.85246415309849 38.0 34.0 40.0 23.0 41.0 42 34.54595843006654 38.0 33.0 40.0 22.0 41.0 43 34.15327747788356 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 6.0 13 3.0 14 20.0 15 21.0 16 64.0 17 117.0 18 286.0 19 707.0 20 1552.0 21 3066.0 22 5746.0 23 9985.0 24 16343.0 25 25328.0 26 37333.0 27 52568.0 28 72346.0 29 94865.0 30 118255.0 31 145944.0 32 178208.0 33 219586.0 34 272973.0 35 338284.0 36 443862.0 37 654278.0 38 844380.0 39 1034000.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.05134208436084 20.74317360775295 14.629999584256904 22.575484723629305 2 18.48743908816598 24.0144153448589 35.29549487651336 22.20265069046176 3 19.45283832188581 24.26738407878988 33.57646281396809 22.703314785356216 4 13.147131482036617 16.131729294352677 36.199954924695795 34.52118429891491 5 12.227245176833044 39.08295825282869 34.702645220157855 13.98715135018041 6 31.94701244822357 37.79794010236033 13.416620533770374 16.838426915645726 7 25.50483246647251 33.98629798277073 21.06176410736675 19.447105443390015 8 27.870126232732982 34.00485325362736 18.69544192397153 19.42957858966813 9 24.582976851861982 14.436460231984649 21.79559443604449 39.18496848010888 10 16.463995553736986 28.279961401535626 32.605155652027406 22.65088739269999 11 33.17629914247516 22.788170139580274 23.271373024399743 20.76415769354482 12 21.60706588215215 27.93038710058576 30.565629424108288 19.896917593153805 13 32.24365608855766 20.929623446160175 26.023526683048402 20.803193782233766 14 20.45828018021369 22.91781634220471 28.756709327743412 27.867194149838188 15 22.516339797773803 30.185005678175457 25.682923680507997 21.615730843542742 16 21.315214228041654 28.25088126595961 26.775233964898153 23.658670541100584 17 21.48630345307464 27.009581784325608 27.418957447599958 24.08515731499979 18 22.778936266583226 25.415841562493846 30.215114230886208 21.590107940036717 19 22.632682221293486 24.636848404749976 31.848196878425778 20.882272495530763 20 23.41029686245249 24.481754348344577 31.156553533488108 20.95139525571483 21 22.16683114047084 25.390065490478392 31.823449223545065 20.61965414550571 22 20.768008787496196 25.9390433094901 31.366044291956683 21.926903611057018 23 21.806622568723427 25.990114066777092 31.998695879548283 20.204567484951195 24 21.473459179498175 26.09871053996276 30.082426539288814 22.34540374125025 25 21.583237238328014 26.07144654528427 31.283595871452235 21.061720344935484 26 21.02666663749171 27.263031905000513 31.15342451965261 20.556876937855158 27 20.05750383468304 27.08299326277371 30.90028073599657 21.959222166546684 28 20.61764107366749 26.818777584007456 30.88706448175435 21.676516860570704 29 20.86883742913221 26.777312680383268 30.090391301779164 22.263458588705355 30 20.83463708909812 27.032907160190188 31.848043709916347 20.28441204079534 31 21.638815526035366 26.88249568393022 31.451862419668586 20.026826370365832 32 21.02049613468326 26.751295914995854 30.469680293558387 21.7585276567625 33 20.63770614840278 26.604954344843584 31.247557509304986 21.509781997448652 34 19.905604435760033 27.116405879045015 31.843076673967698 21.13491301122725 35 19.517147214630658 29.19794404097914 30.65127250209513 20.63363624229508 36 21.752116460582087 27.02583952754079 30.402504961565647 20.819539050311477 37 20.742342121558906 27.725972784144 30.436508370659038 21.09517672363806 38 20.40674991739841 26.221595446956652 31.81255237815992 21.559102257485016 39 19.913197217584617 26.021601136072714 32.51557395522666 21.549627691116008 40 18.928083008579623 26.425528376654494 32.35697890432001 22.289409710445874 41 20.083630006148624 25.50028117362088 32.48439322294989 21.931695597280605 42 19.00545498705726 27.30486878929046 31.773603814333505 21.916072409318772 43 19.078778940642827 27.113933301678507 31.270576548150707 22.536711209527958 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1193.0 1 1220.5 2 1248.0 3 3139.5 4 5031.0 5 5031.0 6 7744.0 7 10457.0 8 11166.0 9 11875.0 10 17680.5 11 23486.0 12 23486.0 13 43459.5 14 63433.0 15 109304.5 16 155176.0 17 139632.0 18 124088.0 19 124088.0 20 124222.0 21 124356.0 22 95803.0 23 67250.0 24 73590.5 25 79931.0 26 79931.0 27 89016.0 28 98101.0 29 104552.5 30 111004.0 31 120320.0 32 129636.0 33 129636.0 34 144308.5 35 158981.0 36 174775.0 37 190569.0 38 202529.5 39 214490.0 40 214490.0 41 224520.0 42 234550.0 43 249576.0 44 264602.0 45 283350.5 46 302099.0 47 302099.0 48 392629.5 49 483160.0 50 448988.5 51 414817.0 52 374411.5 53 334006.0 54 334006.0 55 297428.5 56 260851.0 57 225150.5 58 189450.0 59 169626.5 60 149803.0 61 149803.0 62 132249.5 63 114696.0 64 99039.0 65 83382.0 66 70237.0 67 57092.0 68 57092.0 69 48965.0 70 40838.0 71 34694.0 72 28550.0 73 23241.5 74 17933.0 75 17933.0 76 14360.0 77 10787.0 78 8419.0 79 6051.0 80 4786.0 81 3521.0 82 3521.0 83 2629.0 84 1737.0 85 1323.5 86 910.0 87 706.0 88 502.0 89 502.0 90 395.0 91 288.0 92 202.5 93 117.0 94 86.0 95 55.0 96 55.0 97 38.0 98 21.0 99 14.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4570130.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.273232569733835 #Duplication Level Percentage of deduplicated Percentage of total 1 75.15914574684534 30.26901756405224 2 12.834063270826485 10.337384298413479 3 4.551048007263105 5.498562444975923 4 2.1890868988943946 3.5264642317812553 5 1.2361251858626825 2.489137854777664 6 0.747263902035369 1.805683975058233 7 0.5144728639825703 1.4503639711390968 8 0.3703297562809503 1.193150112175645 9 0.28728169438867884 1.0412786242028218 >10 1.801490871223296 13.987898413291644 >50 0.1764783591876009 4.9508074877746004 >100 0.11789520573159538 8.75571046508257 >500 0.008994694661499615 2.432884208687584 >1k 0.005396816713937238 4.717181871165678 >5k 3.8159310098546094E-4 1.0451109808761396 >10k+ 5.451330014078013E-4 6.499363496545526 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 83897 1.8357683479463385 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 58685 1.2840991394117893 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 58041 1.2700076365442559 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24925 0.5453892996479313 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 14023 0.3068402868189745 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 12528 0.27412786944791506 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 11504 0.2517215046399118 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11321 0.24771724217910648 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 11090 0.24266268136792607 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10027 0.219402949150243 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 9381 0.20526768385144403 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 7752 0.16962318358558728 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7451 0.16303693768010974 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6419 0.14045552314704396 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5870 0.12844273576462814 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 5377 0.11765529645765001 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5354 0.11715202849809524 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 4925 0.10776498699161731 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4650 0.101747652692593 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 2.1881215632815697E-5 0.0 7 0.0 0.0 0.0 2.1881215632815697E-5 0.0 8 2.1881215632815697E-5 0.0 0.0 2.1881215632815697E-5 0.0 9 2.1881215632815697E-5 0.0 0.0 1.3128729379689418E-4 0.0 10 8.752486253126279E-5 0.0 0.0 1.9693094069534126E-4 0.0 11 1.3128729379689418E-4 0.0 0.0 3.5009945012505115E-4 0.0 12 1.3128729379689418E-4 0.0 0.0 5.03267959554761E-4 0.0 13 1.3128729379689418E-4 0.0 0.0 5.907928220860239E-4 0.0 14 1.5316850942970986E-4 0.0 0.0 7.439613315157337E-4 0.0 15 1.5316850942970986E-4 0.0 0.0 9.627734878438906E-4 0.0 16 1.7504972506252557E-4 0.0 0.0 0.0014222790161330203 0.0 17 1.7504972506252557E-4 0.0 0.0 0.002231883994547201 0.0 18 1.9693094069534126E-4 0.0 0.0 0.0027570331697347778 0.0 19 1.9693094069534126E-4 0.0 0.0 0.0036322817950474057 0.0 20 1.9693094069534126E-4 0.0 0.0 0.005973571867758685 0.0 21 1.9693094069534126E-4 0.0 0.0 0.011159419972736005 0.0 22 1.9693094069534126E-4 0.0 0.0 0.018402102347198 0.0 23 2.1881215632815697E-4 0.0 0.0 0.022603295748698616 0.0 24 2.4069337196097265E-4 0.0 0.0 0.02929894773234022 0.0 25 2.4069337196097265E-4 0.0 0.0 0.033894003015231516 0.0 26 2.4069337196097265E-4 0.0 0.0 0.042165102524435845 0.0 27 2.4069337196097265E-4 0.0 0.0 0.08938476586005212 0.0 28 2.6257458759378836E-4 0.0 0.0 0.21266353473533575 0.0 29 2.6257458759378836E-4 0.0 0.0 0.39793178749838626 0.0 30 2.6257458759378836E-4 0.0 0.0 0.646568040734071 0.0 31 2.8445580322660407E-4 0.0 0.0 0.9817882642288075 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATTGG 1630 0.0 21.337423 1 GGTATCA 20975 0.0 20.330154 1 ATTGGAC 1810 0.0 19.21547 3 TTGGACC 2375 0.0 17.76 4 GTATTAG 800 0.0 16.881248 1 GGACCCT 2350 0.0 16.453192 6 TATACCG 250 0.0 16.279999 5 TGGACCC 2425 0.0 16.249483 5 ACGTATA 195 1.8189894E-12 16.128204 29 TCTAACG 165 9.767973E-10 15.696971 2 GACGTAT 210 9.094947E-12 14.97619 28 TATTGGA 2280 0.0 14.929824 2 TATACTG 510 0.0 14.872549 5 GACCCTC 2520 0.0 14.829365 7 ACGTTCG 485 0.0 14.113402 22 TAATACT 1075 0.0 13.939535 4 TAGTACT 595 0.0 13.680673 4 GATACTG 2035 0.0 13.454545 36 TCTACAC 550 0.0 13.454545 3 ATTAGAG 760 0.0 13.388158 3 >>END_MODULE