##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088535_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1033887 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.703389248534897 31.0 31.0 34.0 30.0 34.0 2 31.858743750525928 31.0 31.0 34.0 30.0 34.0 3 31.978977393080676 33.0 31.0 34.0 30.0 34.0 4 35.65306846879785 37.0 35.0 37.0 33.0 37.0 5 35.56764520687464 37.0 35.0 37.0 33.0 37.0 6 35.61832579382467 37.0 35.0 37.0 33.0 37.0 7 35.47293272862508 37.0 35.0 37.0 33.0 37.0 8 35.51656032042187 37.0 35.0 37.0 33.0 37.0 9 37.119681357827304 39.0 37.0 39.0 33.0 39.0 10 36.977934725942006 39.0 37.0 39.0 33.0 39.0 11 37.035225319594886 39.0 37.0 39.0 33.0 39.0 12 36.894185728227555 39.0 37.0 39.0 33.0 39.0 13 36.94965407244699 39.0 37.0 39.0 33.0 39.0 14 37.96226086603275 40.0 37.0 41.0 33.0 41.0 15 37.97167098532044 40.0 37.0 41.0 33.0 41.0 16 37.858337516575794 40.0 37.0 41.0 32.0 41.0 17 37.89836800346653 40.0 37.0 41.0 33.0 41.0 18 37.87799150197265 40.0 37.0 41.0 33.0 41.0 19 37.947432359629246 40.0 37.0 41.0 33.0 41.0 20 37.84593093829403 40.0 37.0 41.0 32.0 41.0 21 37.71387395334306 40.0 37.0 41.0 32.0 41.0 22 37.58898506316454 39.0 37.0 41.0 32.0 41.0 23 37.425857951594324 39.0 36.0 41.0 32.0 41.0 24 37.575955592825906 39.0 36.0 41.0 32.0 41.0 25 37.52907812942807 39.0 36.0 41.0 32.0 41.0 26 37.32553170704342 39.0 36.0 41.0 31.0 41.0 27 37.2716157568477 39.0 36.0 41.0 31.0 41.0 28 37.12574488314487 39.0 36.0 41.0 31.0 41.0 29 36.90060132296856 39.0 35.0 41.0 30.0 41.0 30 36.733921598782075 39.0 35.0 41.0 30.0 41.0 31 36.49600875143995 39.0 35.0 40.0 30.0 41.0 32 36.34454635758066 38.0 35.0 40.0 30.0 41.0 33 36.16947983677133 38.0 35.0 40.0 30.0 41.0 34 35.97829356593129 38.0 35.0 40.0 29.0 41.0 35 35.77937821057814 38.0 35.0 40.0 28.0 41.0 36 35.69749208569215 38.0 35.0 40.0 27.0 41.0 37 35.550136523623955 38.0 35.0 40.0 27.0 41.0 38 35.411401826311774 38.0 35.0 40.0 26.0 41.0 39 35.26170751735925 38.0 34.0 40.0 25.0 41.0 40 35.072775844942434 38.0 34.0 40.0 24.0 41.0 41 34.92559631758596 38.0 34.0 40.0 24.0 41.0 42 34.63729595207213 38.0 33.0 40.0 22.0 41.0 43 34.2397109161833 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 4.0 15 4.0 16 16.0 17 26.0 18 51.0 19 179.0 20 316.0 21 677.0 22 1245.0 23 2204.0 24 3645.0 25 5593.0 26 8309.0 27 11634.0 28 16086.0 29 21230.0 30 26780.0 31 32661.0 32 40338.0 33 49996.0 34 62499.0 35 77118.0 36 100687.0 37 147698.0 38 194001.0 39 230888.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.240193560805 21.21266637456511 14.851139437868936 22.696000626760952 2 18.245417535958957 23.89951706521119 35.741043266817364 22.114022132012494 3 19.212544504380073 24.504322039062295 33.47541849351041 22.807714963047218 4 13.259089242828278 16.427036997273397 36.42641797411129 33.88745578578703 5 12.168641253831415 39.074966606602075 34.88882247286212 13.867569666704387 6 31.659262569313668 38.2063030099034 13.691438232611494 16.442996188171435 7 25.252082674412197 33.93455957952852 21.48484312115347 19.328514624905814 8 27.363338546669024 34.56151397589872 19.03689668213257 19.03825079529968 9 24.520377952329415 14.629355045570744 21.907906763505103 38.942360238594745 10 16.40430724053983 28.29419462668551 32.91181724888696 22.389680883887696 11 33.14569193732004 22.914883347986773 23.36986537213448 20.569559342558712 12 21.224079614116437 28.029175335408997 30.7684495500959 19.978295500378668 13 31.800670672907195 21.128517913466364 26.157113881884577 20.913697531741864 14 20.235867169236098 23.091111504448744 28.77625891417534 27.896762412139818 15 22.40244823660613 30.263945672979737 25.60463570970522 21.72897038070892 16 21.128517913466364 28.550895794221226 26.921704209454223 23.398882082858186 17 21.396535598184325 27.21312870748931 27.57100147308168 23.81933422124468 18 22.648606665912233 25.687043168160546 30.157937956469134 21.50641220945809 19 22.527123370348985 24.988997830517263 31.703948303828174 20.779930495305578 20 23.227296600112005 24.857068519093477 31.01112597411516 20.904508906679357 21 22.0480574763006 25.74749464883493 31.597263530734015 20.607184344130452 22 20.811171820518105 26.22472281787081 31.18870824374424 21.775397117866845 23 21.68505842514704 26.239327895601743 31.765560452931506 20.310053226319706 24 21.47023804342254 26.283530018270856 30.037034995120354 22.209196943186246 25 21.545681491304176 26.241165620614243 31.151663576386973 21.061489311694608 26 21.0108067902972 27.396804486370367 30.932587410422997 20.659801312909437 27 20.115737986839953 27.249786485370258 30.654123709844498 21.980351817945287 28 20.640843728569948 26.962230882098332 30.69426349301229 21.702661896319423 29 20.904895796155675 26.834073743068632 30.020495470007845 22.24053499076785 30 20.894256335556978 27.080232172374735 31.584689622753743 20.440821869314536 31 21.60932481015817 26.88195131576275 31.349654265891726 20.159069608187355 32 20.988463923039944 26.749538392493573 30.526643627398354 21.735354057068133 33 20.60437939542716 26.607840121792808 31.194898475365296 21.592882007414737 34 20.081885157662295 26.959425933395043 31.789160710986792 21.16952819795587 35 19.59469458461128 28.78573770634508 30.739336117003113 20.880231592040523 36 21.632925068213453 26.820145721921257 30.485923510016082 21.061005699849208 37 20.701198486875256 27.3187495345236 30.556917728920084 21.42313424968106 38 20.39826402691977 26.113588815799016 31.77726385959007 21.71088329769114 39 19.900917605115453 25.915211236817946 32.52608844099984 21.65778271706676 40 18.958164673702253 26.28913991567744 32.407603538878035 22.34509187174227 41 19.987000513595778 25.4387568467347 32.515448980401146 22.05879365926837 42 19.11775658268263 27.184305441503763 31.69640395904001 22.001534016773594 43 19.169889939616226 26.935535508232523 31.30883742614038 22.58573712601087 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 302.0 1 305.0 2 308.0 3 712.0 4 1116.0 5 1116.0 6 1662.0 7 2208.0 8 2386.0 9 2564.0 10 3876.5 11 5189.0 12 5189.0 13 9443.5 14 13698.0 15 23309.0 16 32920.0 17 29692.5 18 26465.0 19 26465.0 20 26710.0 21 26955.0 22 21074.5 23 15194.0 24 16960.5 25 18727.0 26 18727.0 27 20727.0 28 22727.0 29 24488.0 30 26249.0 31 28617.0 32 30985.0 33 30985.0 34 34642.0 35 38299.0 36 42319.0 37 46339.0 38 49191.0 39 52043.0 40 52043.0 41 53990.0 42 55937.0 43 58935.0 44 61933.0 45 66132.0 46 70331.0 47 70331.0 48 88632.5 49 106934.0 50 98854.0 51 90774.0 52 82082.5 53 73391.0 54 73391.0 55 65597.5 56 57804.0 57 49606.5 58 41409.0 59 37063.0 60 32717.0 61 32717.0 62 28845.5 63 24974.0 64 21780.5 65 18587.0 66 15718.5 67 12850.0 68 12850.0 69 10902.5 70 8955.0 71 7557.5 72 6160.0 73 4980.5 74 3801.0 75 3801.0 76 3029.5 77 2258.0 78 1784.0 79 1310.0 80 1024.5 81 739.0 82 739.0 83 549.5 84 360.0 85 272.0 86 184.0 87 143.5 88 103.0 89 103.0 90 77.5 91 52.0 92 36.5 93 21.0 94 15.5 95 10.0 96 10.0 97 7.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1033887.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.30888960096898 #Duplication Level Percentage of deduplicated Percentage of total 1 83.93980554574918 47.26557243602394 2 9.185703247004916 10.344735000857243 3 2.588800042495143 4.373173673755285 4 1.1972144274543126 2.696552600968487 5 0.6897065588824289 1.9418305240587446 6 0.4353277019178598 1.4707691704521777 7 0.31318246362395513 1.2344469738412542 8 0.23797599190492394 1.0720131084684361 9 0.17578494185260207 0.890842939586183 >10 1.102455238085458 11.600783009921148 >50 0.0777096242825776 3.0079105799929096 >100 0.0480649743251105 4.907274920764982 >500 0.005340552397252952 2.199334478782019 >1k 0.002239586489170593 2.387818374877355 >5k 1.722758837823533E-4 0.5190825157005373 >10k+ 5.168276513470598E-4 4.087859691949289 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 17694 1.711405598484167 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12355 1.195004869971283 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12091 1.169470164534422 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5351 0.5175613969418321 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2997 0.28987694012982074 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2616 0.2530257175107144 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2493 0.24112886611399506 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2381 0.2302959607771449 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2268 0.2193663330712157 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2198 0.21259576723568438 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1911 0.18483644731000584 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1607 0.15543284710998398 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1484 0.1435359957132646 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1233 0.11925868107443077 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1193 0.11538978631126999 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1161 0.11229467050074139 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1073 0.10378310202178767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 9.672236907901927E-5 0.0 10 0.0 0.0 0.0 9.672236907901927E-5 0.0 11 0.0 0.0 0.0 5.803342144741156E-4 0.0 12 0.0 0.0 0.0 0.001450835536185289 0.0 13 0.0 0.0 0.0 0.001450835536185289 0.0 14 0.0 0.0 0.0 0.0020311697506594046 0.0 15 0.0 0.0 0.0 0.002418059226975482 0.0 16 0.0 0.0 0.0 0.003578727655923713 0.0 17 0.0 0.0 0.0 0.003965617132239791 0.0 18 0.0 0.0 0.0 0.004739396084871944 0.0 19 0.0 0.0 0.0 0.006577121097373311 0.0 20 0.0 0.0 0.0 0.011800129027640351 0.0 21 0.0 0.0 0.0 0.0210854764592262 0.0 22 0.0 0.0 0.0 0.03269216074870852 0.0 23 0.0 0.0 0.0 0.041010284489504174 0.0 24 0.0 0.0 0.0 0.05223007930267041 0.0 25 0.0 0.0 0.0 0.059484256983596856 0.0 26 0.0 0.0 0.0 0.06847943730794565 0.0 27 0.0 0.0 0.0 0.11664717710929724 0.0 28 0.0 0.0 0.0 0.251091270129134 0.0 29 0.0 0.0 0.0 0.4646542610556086 0.0 30 0.0 0.0 0.0 0.7467934116591078 0.0 31 0.0 0.0 0.0 1.1473207420153266 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 65 2.6824127E-6 22.76923 5 TTAGTAC 45 0.0038255511 20.555557 3 GGTATCA 4285 0.0 20.421238 1 ACGTTTA 65 6.901271E-5 19.923077 26 GTATTGG 435 0.0 19.56322 1 TCGGCTC 50 0.0070344144 18.5 29 CGTTTAT 70 1.2190465E-4 18.5 27 CTCTAAT 150 1.2732926E-11 18.5 1 TACACCG 50 0.0070344144 18.5 5 ATTGGAC 475 0.0 17.526316 3 CCGGTCT 95 3.6056754E-6 17.526316 9 TAATACT 245 0.0 17.367346 4 GGCTAGC 75 2.0670125E-4 17.266666 1 TACTCCG 110 7.805738E-7 16.818182 5 GGACCCT 540 0.0 16.787037 6 TCTAATA 245 0.0 16.612244 2 TATTGGA 525 0.0 16.561905 2 TAGTACC 90 4.4452598E-5 16.444445 4 TGTACTG 250 0.0 16.279999 5 GTCTATA 80 3.3821532E-4 16.1875 1 >>END_MODULE