##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088534_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 520342 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.71678050205442 31.0 31.0 34.0 30.0 34.0 2 31.868657536773892 31.0 31.0 34.0 30.0 34.0 3 31.9756160371448 33.0 31.0 34.0 30.0 34.0 4 35.64233138973982 37.0 35.0 37.0 33.0 37.0 5 35.587676950928426 37.0 35.0 37.0 33.0 37.0 6 35.65685068666377 37.0 35.0 37.0 33.0 37.0 7 35.48164860803087 37.0 35.0 37.0 33.0 37.0 8 35.546623182445394 37.0 35.0 37.0 33.0 37.0 9 37.125317579591886 39.0 37.0 39.0 33.0 39.0 10 37.020849748819046 39.0 37.0 39.0 33.0 39.0 11 37.08563214193742 39.0 37.0 39.0 33.0 39.0 12 36.91380861049079 39.0 37.0 39.0 32.0 39.0 13 36.957971872345496 39.0 37.0 39.0 33.0 39.0 14 37.90425720007226 40.0 37.0 41.0 32.0 41.0 15 37.91071256980985 40.0 37.0 41.0 33.0 41.0 16 37.80852593102229 40.0 37.0 41.0 32.0 41.0 17 37.919595189317796 40.0 37.0 41.0 33.0 41.0 18 37.92066371732437 40.0 37.0 41.0 33.0 41.0 19 38.01354109412655 40.0 37.0 41.0 33.0 41.0 20 37.9242440548716 40.0 37.0 41.0 32.0 41.0 21 37.772003797502414 40.0 37.0 41.0 32.0 41.0 22 37.682207086877476 40.0 37.0 41.0 32.0 41.0 23 37.46977756936784 39.0 36.0 41.0 32.0 41.0 24 37.605374926490654 40.0 36.0 41.0 32.0 41.0 25 37.5384766173017 40.0 36.0 41.0 32.0 41.0 26 37.31078213943906 39.0 36.0 41.0 31.0 41.0 27 37.267918023146315 39.0 36.0 41.0 31.0 41.0 28 37.097558913176336 39.0 35.0 41.0 31.0 41.0 29 36.856361777446374 39.0 35.0 41.0 31.0 41.0 30 36.638241771757805 39.0 35.0 40.0 30.0 41.0 31 36.31742584684688 38.0 35.0 40.0 30.0 41.0 32 36.154187053899165 38.0 35.0 40.0 30.0 41.0 33 35.95344408100826 38.0 35.0 40.0 30.0 41.0 34 35.718733064023276 38.0 35.0 40.0 29.0 41.0 35 35.49342739967175 38.0 35.0 40.0 27.0 41.0 36 35.37714618462473 38.0 35.0 40.0 26.0 41.0 37 35.17003432357949 38.0 34.0 40.0 25.0 41.0 38 35.01427522667784 38.0 34.0 40.0 24.0 41.0 39 34.83224879021874 38.0 34.0 40.0 24.0 41.0 40 34.59383059603107 38.0 33.0 40.0 23.0 41.0 41 34.41512889599532 38.0 33.0 40.0 21.0 41.0 42 34.03002640571009 38.0 33.0 40.0 18.0 41.0 43 33.59287161136329 37.0 33.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 1.0 15 1.0 16 4.0 17 11.0 18 28.0 19 74.0 20 176.0 21 346.0 22 656.0 23 1187.0 24 1946.0 25 2961.0 26 4456.0 27 6449.0 28 8570.0 29 11507.0 30 14255.0 31 16956.0 32 20624.0 33 25749.0 34 31835.0 35 39177.0 36 51774.0 37 77944.0 38 93537.0 39 110117.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.59629628206065 21.226231978198953 15.956813019129726 21.220658720610675 2 18.378681713180946 24.6355281718562 36.17024956663118 20.815540548331672 3 19.162012676278295 24.399529540187032 34.85784349523967 21.580614288295006 4 12.713561465343947 16.10363952938644 36.14084582832061 35.04195317694901 5 11.208589735212609 39.74328422460612 34.80249528194918 14.245630758232085 6 30.97040023676736 38.31998954533749 12.778326562145667 17.93128365574949 7 23.908121965937788 35.44245899812047 20.725791883030777 19.92362715291097 8 27.68102517190617 34.127554569879045 18.706543004408637 19.48487725380615 9 23.83317126044025 14.582716751674859 22.76541197904455 38.81870000884034 10 16.354820483451267 28.71419181999531 32.20401197673838 22.726975719815044 11 32.328353275345826 22.845935942130367 24.029004001214584 20.796706781309215 12 21.742238758355082 28.984206541082596 30.472074135856804 18.80148056470552 13 33.13013364287334 21.529301882223614 26.510064534479245 18.8304999404238 14 19.69300959753393 24.07224479284778 29.612447198188885 26.62229841142941 15 21.30137486499264 31.080327938163748 26.917681063608168 20.70061613323545 16 20.095437231666864 29.270172309750127 27.42907549265675 23.205314965926256 17 20.874540206248966 27.394482859350195 27.375649092327738 24.3553278420731 18 23.04849502826987 25.066014275226678 31.356492460727754 20.5289982357757 19 22.370671596757514 24.463333730508012 33.22411029668949 19.941884376044985 20 23.418251842057725 23.884291485215492 32.641224425474014 20.056232247252765 21 21.598487148836725 24.98933393806381 34.030695196620684 19.38148371647878 22 19.56213413485746 25.600662641109118 33.198358003005715 21.638845221027708 23 21.284462910931655 25.630258560715834 34.21884068554912 18.86643784280339 24 20.615287637745944 25.733075554154766 31.61843556737684 22.03320124072245 25 20.60221930960791 26.10360109312721 33.074977610878996 20.219201986385876 26 19.950340353075475 27.640282737122888 32.79247110554213 19.616905804259506 27 18.4055870946416 27.426577135806834 32.47729377986017 21.690541989691393 28 19.539648923208198 26.64593671085555 32.28472812112034 21.52968624481591 29 19.69762194864147 26.48546532857236 31.220235921759148 22.596676801027016 30 20.034515760788096 26.771238915943744 33.87137690211438 19.32286842115378 31 21.20547639821502 26.619992235875635 33.225263384466366 18.949267981442976 32 20.395624416249312 26.632676201421372 31.89017992012945 21.08151946219986 33 19.77430228580434 26.108982169419342 33.01040469537343 21.10631084940289 34 18.578165898582085 27.03241329740824 34.00513508423306 20.38428571977661 35 17.981250792747847 29.85517217522322 32.20381979544223 19.959757236586707 36 21.1213009905024 26.63997909067498 31.828105361473803 20.410614557348822 37 19.872506928135728 28.138993200625745 31.707607688789295 20.280892182449236 38 19.60037821279082 25.680994422898785 33.600209093250214 21.11841827106019 39 18.89199795519101 25.65255159106895 34.46118129999116 20.99426915374888 40 17.26614418978287 26.01327588393787 34.35586594970231 22.364713976576944 41 19.077645087269527 25.33160882650257 34.27053745421281 21.3202086320151 42 18.13691764262735 27.699474576336332 33.21834485780506 20.945262923231258 43 18.009693624577682 27.949310261328126 32.15404483974002 21.886951274354175 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 157.0 1 163.0 2 169.0 3 401.5 4 634.0 5 634.0 6 999.0 7 1364.0 8 1495.0 9 1626.0 10 2436.5 11 3247.0 12 3247.0 13 5995.5 14 8744.0 15 15407.5 16 22071.0 17 19914.0 18 17757.0 19 17757.0 20 17416.0 21 17075.0 22 12948.0 23 8821.0 24 9419.0 25 10017.0 26 10017.0 27 10592.0 28 11167.0 29 11655.5 30 12144.0 31 13157.5 32 14171.0 33 14171.0 34 15654.5 35 17138.0 36 18656.5 37 20175.0 38 21483.0 39 22791.0 40 22791.0 41 23592.0 42 24393.0 43 25938.0 44 27483.0 45 31060.0 46 34637.0 47 34637.0 48 50146.0 49 65655.0 50 58751.5 51 51848.0 52 45140.0 53 38432.0 54 38432.0 55 33011.5 56 27591.0 57 22404.0 58 17217.0 59 15155.0 60 13093.0 61 13093.0 62 11286.0 63 9479.0 64 8211.0 65 6943.0 66 5927.0 67 4911.0 68 4911.0 69 4146.0 70 3381.0 71 2918.0 72 2455.0 73 2014.0 74 1573.0 75 1573.0 76 1230.5 77 888.0 78 705.0 79 522.0 80 397.0 81 272.0 82 272.0 83 200.0 84 128.0 85 112.0 86 96.0 87 70.5 88 45.0 89 45.0 90 31.5 91 18.0 92 13.5 93 9.0 94 6.0 95 3.0 96 3.0 97 2.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 520342.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.87105125659414 #Duplication Level Percentage of deduplicated Percentage of total 1 85.65929067518175 47.85874619916576 2 7.875717908206139 8.800492778637231 3 2.406021068800782 4.032807793782417 4 1.1551465217003976 2.581570020911974 5 0.6520606088640108 1.8215655850123567 6 0.4332149266177503 1.45225040221092 7 0.3287154261980204 1.285597349815995 8 0.22265509910034878 0.9951979563502108 9 0.19403367597076385 0.9756778910101133 >10 0.9511003659550623 9.513826006397352 >50 0.06274564316936823 2.4772724246553928 >100 0.047231610420151775 5.790511120038682 >500 0.006895125608781281 2.625589018603129 >1k 0.004137075365268768 4.201982572139041 >5k 6.89512560878128E-4 3.2920506138174805 >10k+ 3.44756280439064E-4 2.294862267451961 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11914 2.289647962301717 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8592 1.65122169649961 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8499 1.6333488359578892 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3264 0.6272797506255501 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2600 0.49967136998358774 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2198 0.4224144889322792 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2085 0.40069800246760784 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2021 0.38839839951416566 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1774 0.34092961936572486 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1773 0.3407374380695773 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1688 0.324402027897037 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1255 0.24118752666515483 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1090 0.20947761280081176 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1045 0.20082945447417277 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1022 0.1964092846627795 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 932 0.17911296800950144 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 884 0.16988826579441985 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 809 0.1554746685833548 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 790 0.15182322395655165 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 763 0.14663432896056824 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 748 0.14375160951835525 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 723 0.1389470771146669 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 712 0.136833082857044 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 707 0.13587217637630633 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 701 0.13471908859942114 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 658 0.1264552928650772 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 646 0.12414911731130679 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 634 0.12184294175753639 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 630 0.12107421657294626 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 587 0.11281042083860231 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 574 0.11031206398868436 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 570 0.10954333880409423 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 556 0.10685280065802875 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0011530877768852023 0.0 12 0.0 0.0 0.0 0.002113994257622871 0.0 13 0.0 0.0 0.0 0.002113994257622871 0.0 14 0.0 0.0 0.0 0.002882719442213006 0.0 15 0.0 0.0 0.0 0.004227988515245742 0.0 16 0.0 0.0 0.0 0.005957620180573546 0.0 17 0.0 0.0 0.0 0.009224702215081619 0.0 18 0.0 0.0 0.0 0.01076215258426189 0.0 19 0.0 0.0 0.0 0.013068328138032295 0.0 20 0.0 0.0 0.0 0.023446118129999118 0.0 21 0.0 0.0 0.0 0.04170334126401482 0.0 22 0.0 0.0 0.0 0.06783999754007941 0.0 23 0.0 0.0 0.0 0.08110050697425923 0.0 24 0.0 0.0 0.0 0.10147172436589781 0.0 25 0.0 0.0 0.0 0.1110807891732745 0.0 26 0.0 0.0 0.0 0.1235725734228642 0.0 27 0.0 0.0 0.0 0.19314220262827142 0.0 28 0.0 0.0 0.0 0.3755222526722809 0.0 29 0.0 0.0 0.0 0.6714814487394829 0.0 30 0.0 0.0 0.0 1.094280300264057 0.0 31 0.0 0.0 0.0 1.6222023207813323 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGGGATT 40 0.0019297748 23.125 28 CCCTAGA 40 0.0019297748 23.125 2 GGTATCA 2805 0.0 22.490194 1 GGACCCT 275 0.0 22.2 6 TATACTG 50 2.6993488E-4 22.2 5 GTATTGG 170 0.0 21.764706 1 GACCCTC 290 0.0 21.051723 7 ATTGGAC 175 0.0 20.085714 3 GTACGGA 65 6.892852E-5 19.923077 3 TTGGACC 310 0.0 19.096773 4 TGGACCC 320 0.0 18.5 5 TAGCACC 50 0.0070298347 18.5 4 GCCCTAG 50 0.0070298347 18.5 1 TATTAAG 60 9.227559E-4 18.5 2 GACTTGC 65 0.0015783628 17.076923 8 ACCCTCG 360 0.0 16.958334 8 TATTGGA 210 0.0 16.738094 2 TACTGTG 90 4.4384353E-5 16.444445 7 GTTTAAG 80 3.3781168E-4 16.1875 1 CGTGTCT 80 3.3781168E-4 16.1875 35 >>END_MODULE