##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088530_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3497484 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.807506767722167 31.0 31.0 34.0 30.0 34.0 2 31.97300916887683 31.0 31.0 34.0 30.0 34.0 3 32.09708407529527 33.0 31.0 34.0 30.0 34.0 4 35.7546687847607 37.0 35.0 37.0 35.0 37.0 5 35.66449996626146 37.0 35.0 37.0 33.0 37.0 6 35.70923440964991 37.0 35.0 37.0 33.0 37.0 7 35.57624366544636 37.0 35.0 37.0 33.0 37.0 8 35.606602632063506 37.0 35.0 37.0 33.0 37.0 9 37.229839507485956 39.0 37.0 39.0 34.0 39.0 10 37.095321093677626 39.0 37.0 39.0 33.0 39.0 11 37.15173393216381 39.0 37.0 39.0 33.0 39.0 12 37.0118450863535 39.0 37.0 39.0 33.0 39.0 13 37.07090068174722 39.0 37.0 39.0 33.0 39.0 14 38.13182676461136 40.0 37.0 41.0 33.0 41.0 15 38.127452763186334 40.0 37.0 41.0 33.0 41.0 16 38.019616673014085 40.0 37.0 41.0 33.0 41.0 17 38.04682937791853 40.0 37.0 41.0 33.0 41.0 18 38.01101248783411 40.0 37.0 41.0 33.0 41.0 19 38.07170897708181 40.0 37.0 41.0 33.0 41.0 20 37.972869925923895 40.0 37.0 41.0 33.0 41.0 21 37.84441901664168 40.0 37.0 41.0 32.0 41.0 22 37.72911984729594 40.0 37.0 41.0 32.0 41.0 23 37.58387686691347 40.0 37.0 41.0 32.0 41.0 24 37.741153640731454 40.0 37.0 41.0 32.0 41.0 25 37.702606788194025 40.0 37.0 41.0 32.0 41.0 26 37.521179224837056 40.0 37.0 41.0 32.0 41.0 27 37.48051799522171 40.0 36.0 41.0 32.0 41.0 28 37.33685272041273 39.0 36.0 41.0 31.0 41.0 29 37.12438112654697 39.0 36.0 41.0 31.0 41.0 30 36.98122250166119 39.0 36.0 41.0 31.0 41.0 31 36.77316293655668 39.0 35.0 41.0 30.0 41.0 32 36.63601720551116 39.0 35.0 40.0 30.0 41.0 33 36.480484542602625 39.0 35.0 40.0 30.0 41.0 34 36.30880284227176 38.0 35.0 40.0 30.0 41.0 35 36.11463669311997 38.0 35.0 40.0 30.0 41.0 36 36.04515789064367 38.0 35.0 40.0 29.0 41.0 37 35.92348957136044 38.0 35.0 40.0 28.0 41.0 38 35.788624908648615 38.0 35.0 40.0 27.0 41.0 39 35.65737970495362 38.0 35.0 40.0 27.0 41.0 40 35.480555450718285 38.0 35.0 40.0 26.0 41.0 41 35.3493980244084 38.0 35.0 40.0 25.0 41.0 42 35.07284407877206 38.0 34.0 40.0 24.0 41.0 43 34.69487008375163 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 4.0 14 7.0 15 16.0 16 34.0 17 82.0 18 205.0 19 468.0 20 945.0 21 1959.0 22 3659.0 23 6444.0 24 10626.0 25 16451.0 26 24251.0 27 34710.0 28 47997.0 29 64240.0 30 81874.0 31 102451.0 32 127214.0 33 158537.0 34 199660.0 35 251558.0 36 334829.0 37 493728.0 38 669503.0 39 866030.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.44324891836531 21.015907435173396 14.37713510626496 23.163708540196325 2 18.263929155930377 23.639078834956788 35.80839826572473 22.288593743388105 3 18.74627589432861 24.35390697998904 33.76730243798114 23.132514687701217 4 13.180732206351767 16.29631472224033 36.80288458789233 33.72006848351558 5 12.316024891035957 38.63914745571388 35.240389948888975 13.804437704361192 6 31.75914457364208 38.19622906066189 13.874573836506471 16.170052529189554 7 25.68351992460866 33.96776082463851 21.32515831380501 19.023560936947817 8 27.20921668262099 34.36407428883163 19.104762166174314 19.321946862373064 9 24.634851796319868 14.635520848701525 21.80195820767157 38.927669147307036 10 16.234470264910435 28.24044370181536 33.13756403174396 22.387522001530243 11 33.26399777668747 22.94294984623232 23.403137798486 20.38991457859421 12 21.590749235736318 27.76595975850068 30.50264132730843 20.14064967845457 13 31.89515663259646 21.192891804508612 25.778130793450377 21.13382076944455 14 20.61742098033901 23.07953374482914 28.280329516875558 28.02271575795629 15 22.876244751941684 30.3838416415915 24.842429586525625 21.897484019941192 16 21.76570357434087 28.57305422984065 26.35883395034831 23.302408245470172 17 21.68501700079257 27.4366087164373 27.00644234541173 23.871931937358397 18 22.766766052396523 25.89247012995628 29.70152258023196 21.639241237415238 19 22.6266653399987 25.230108272117903 31.104788470797867 21.03843791708554 20 23.508070372873757 25.025990111748904 30.20634261657809 21.259596898799252 21 22.334054994962095 25.79763052525759 30.887660958563355 20.980653521216965 22 21.30497237442687 26.415846362699586 30.34149691606881 21.93768434680473 23 22.25925836973093 26.24054892030957 30.741127050188076 20.759065659771426 24 21.702200782047896 26.479463522921048 29.335287881231192 22.483047813799864 25 22.015454538176588 26.272657716232583 30.328316012310562 21.383571733280267 26 21.258653363389225 27.485300861991075 30.288258645357637 20.967787129262064 27 20.432516631956 27.3008253933399 30.096034749551393 22.17062322515271 28 21.115121613136758 27.20418449376752 29.850458215105487 21.830235677990235 29 21.207788227194175 27.145456562488924 29.156530809004416 22.490224401312485 30 21.12921746032291 27.59269234684133 30.76826084122186 20.509829351613902 31 22.038757003606023 27.238695016188778 30.363055270588802 20.359492709616397 32 21.352606616642134 27.166586037277085 29.484137740158356 21.996669605922428 33 20.968987992511188 27.01267539751433 30.288515973196734 21.729820636777752 34 20.464225140129304 27.437752395722182 30.84111321166873 21.256909252479783 35 19.953829667269385 29.507440205587788 29.807827569761574 20.73090255738125 36 21.966962536497665 27.688475486950047 29.49380183011559 20.850760146436695 37 20.9905749390133 28.288649783673065 29.492858294705567 21.22791698260807 38 20.706713740506032 26.979422922306433 30.739068427475292 21.57479490971224 39 20.318577583199808 26.659821746146662 31.44225963578389 21.579341034869636 40 19.245377534250334 27.012046373907644 31.52031574697697 22.222260344865052 41 20.370357662822762 26.08395063422735 31.768322599903243 21.77736910304665 42 19.44031766835817 27.704429812974123 31.04511700410924 21.810135514558464 43 19.374699069388164 27.471776854447366 30.69109108147457 22.462432994689895 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1722.0 1 1397.0 2 1072.0 3 2343.0 4 3614.0 5 3614.0 6 5104.5 7 6595.0 8 7194.0 9 7793.0 10 11575.0 11 15357.0 12 15357.0 13 27176.0 14 38995.0 15 67592.5 16 96190.0 17 88902.0 18 81614.0 19 81614.0 20 83446.5 21 85279.0 22 68557.0 23 51835.0 24 58991.0 25 66147.0 26 66147.0 27 73809.0 28 81471.0 29 87009.5 30 92548.0 31 100823.0 32 109098.0 33 109098.0 34 122867.0 35 136636.0 36 148230.0 37 159824.0 38 168501.5 39 177179.0 40 177179.0 41 183808.0 42 190437.0 43 199973.0 44 209509.0 45 221135.0 46 232761.0 47 232761.0 48 292153.0 49 351545.0 50 329144.0 51 306743.0 52 278422.0 53 250101.0 54 250101.0 55 225276.0 56 200451.0 57 171789.0 58 143127.0 59 129551.5 60 115976.0 61 115976.0 62 102329.5 63 88683.0 64 77042.0 65 65401.0 66 55456.0 67 45511.0 68 45511.0 69 38456.5 70 31402.0 71 26414.0 72 21426.0 73 17579.0 74 13732.0 75 13732.0 76 10927.5 77 8123.0 78 6309.0 79 4495.0 80 3513.0 81 2531.0 82 2531.0 83 1894.5 84 1258.0 85 942.5 86 627.0 87 488.0 88 349.0 89 349.0 90 278.5 91 208.0 92 144.5 93 81.0 94 54.0 95 27.0 96 27.0 97 16.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3497484.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.319151608084574 #Duplication Level Percentage of deduplicated Percentage of total 1 74.67026754516813 33.093229079505434 2 13.15925874281209 11.664143665454029 3 4.88629127788694 6.496688518377979 4 2.2680897560689215 4.020792550398484 5 1.2749977191705821 2.825340860794154 6 0.8004600432693484 2.128542600832091 7 0.5191112773581904 1.6104599981892855 8 0.35904789854834807 1.2730158600262724 9 0.25904519740684484 1.033259703949814 >10 1.5650275219984595 12.897836574157514 >50 0.14055090104311418 4.32203227989476 >100 0.08686998272552904 7.1541315539347154 >500 0.005878673091534967 1.791268978707004 >1k 0.004328253813631912 3.950497501410835 >5k 5.168064255082879E-4 1.6687016884247883 >10k+ 2.5840321275414393E-4 4.0700585859428156 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 51436 1.4706571924274707 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 38843 1.1105983615650565 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 37454 1.070884098397591 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14425 0.41243934210992816 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9595 0.27434006846064196 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 9133 0.2611305727202755 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7529 0.21526903339657877 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7488 0.2140967621295766 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 6772 0.1936249029302207 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6709 0.19182360805653434 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5925 0.1694074940728821 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5133 0.1467626442322538 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4639 0.13263820506398313 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4396 0.12569035340833581 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3981 0.11382468082770357 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3821 0.10924996368818271 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3815 0.10907841179545066 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3662 0.10470383853078385 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.859198212200542E-5 2 0.0 0.0 0.0 0.0 2.859198212200542E-5 3 0.0 0.0 0.0 0.0 2.859198212200542E-5 4 0.0 0.0 0.0 0.0 2.859198212200542E-5 5 0.0 0.0 0.0 0.0 2.859198212200542E-5 6 2.859198212200542E-5 0.0 0.0 0.0 2.859198212200542E-5 7 2.859198212200542E-5 0.0 0.0 0.0 2.859198212200542E-5 8 2.859198212200542E-5 0.0 0.0 0.0 2.859198212200542E-5 9 2.859198212200542E-5 0.0 0.0 5.718396424401084E-5 2.859198212200542E-5 10 2.859198212200542E-5 0.0 0.0 8.577594636601626E-5 2.859198212200542E-5 11 2.859198212200542E-5 0.0 0.0 1.1436792848802168E-4 5.718396424401084E-5 12 2.859198212200542E-5 0.0 0.0 1.429599106100271E-4 5.718396424401084E-5 13 2.859198212200542E-5 0.0 0.0 1.7155189273203252E-4 5.718396424401084E-5 14 2.859198212200542E-5 0.0 0.0 1.7155189273203252E-4 5.718396424401084E-5 15 2.859198212200542E-5 0.0 0.0 3.145118033420596E-4 5.718396424401084E-5 16 2.859198212200542E-5 0.0 0.0 6.004316245621138E-4 5.718396424401084E-5 17 2.859198212200542E-5 0.0 0.0 0.001029311356392195 5.718396424401084E-5 18 2.859198212200542E-5 0.0 0.0 0.0012008632491242277 5.718396424401084E-5 19 2.859198212200542E-5 0.0 0.0 0.0015153750524662872 5.718396424401084E-5 20 5.718396424401084E-5 0.0 0.0 0.002516094426736477 5.718396424401084E-5 21 8.577594636601626E-5 0.0 0.0 0.00443175722891084 8.577594636601626E-5 22 1.1436792848802168E-4 0.0 0.0 0.007290955441111382 8.577594636601626E-5 23 1.1436792848802168E-4 0.0 0.0 0.008920698422065691 8.577594636601626E-5 24 1.1436792848802168E-4 0.0 0.0 0.011007913116972086 8.577594636601626E-5 25 1.1436792848802168E-4 0.0 0.0 0.013152311776122493 8.577594636601626E-5 26 1.1436792848802168E-4 0.0 0.0 0.01789858080837539 1.1436792848802168E-4 27 1.1436792848802168E-4 0.0 0.0 0.05097950412353566 1.1436792848802168E-4 28 1.1436792848802168E-4 0.0 0.0 0.1397862005944845 1.1436792848802168E-4 29 1.1436792848802168E-4 0.0 0.0 0.2919241374656753 1.1436792848802168E-4 30 1.1436792848802168E-4 0.0 0.0 0.49787218469048033 1.1436792848802168E-4 31 1.1436792848802168E-4 0.0 0.0 0.7740993239711748 1.429599106100271E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13085 0.0 21.829576 1 GTATTGG 980 0.0 21.709183 1 TATACCG 205 0.0 19.85366 5 ATTGGAC 1060 0.0 18.849054 3 GGACCCT 1390 0.0 17.302158 6 TTGGACC 1520 0.0 16.674343 4 GACCCTC 1470 0.0 16.234694 7 TGGACCC 1560 0.0 15.8910265 5 CCGTATA 230 0.0 15.282609 2 AACGGTA 140 6.004466E-7 14.535714 18 ACGTTCG 365 0.0 14.191781 22 TAGTACT 525 0.0 14.095238 4 GTATTAG 635 0.0 13.984252 1 TATACAC 1405 0.0 13.825623 37 TATTGGA 1395 0.0 13.792114 2 GTATCAA 20685 0.0 13.78221 2 CCCTCGC 1630 0.0 13.7331295 9 ACCCTCG 1700 0.0 13.494118 8 CTAGTAC 445 0.0 13.303371 3 CTAATAC 645 0.0 13.193799 3 >>END_MODULE