##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088528_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3085133 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.763256235630685 31.0 31.0 34.0 30.0 34.0 2 31.923306385818698 31.0 31.0 34.0 30.0 34.0 3 32.036670056039725 33.0 31.0 34.0 30.0 34.0 4 35.697814972644615 37.0 35.0 37.0 35.0 37.0 5 35.62676779250684 37.0 35.0 37.0 33.0 37.0 6 35.68389369275166 37.0 35.0 37.0 33.0 37.0 7 35.52943422536403 37.0 35.0 37.0 33.0 37.0 8 35.57387671779466 37.0 35.0 37.0 33.0 37.0 9 37.17730548407476 39.0 37.0 39.0 33.0 39.0 10 37.05388325235897 39.0 37.0 39.0 33.0 39.0 11 37.11398600967932 39.0 37.0 39.0 33.0 39.0 12 36.96397140739151 39.0 37.0 39.0 33.0 39.0 13 37.01637174151001 39.0 37.0 39.0 33.0 39.0 14 38.026260132059136 40.0 37.0 41.0 33.0 41.0 15 38.02952482113413 40.0 37.0 41.0 33.0 41.0 16 37.92654157859645 40.0 37.0 41.0 33.0 41.0 17 37.99276497966214 40.0 37.0 41.0 33.0 41.0 18 37.97039057959576 40.0 37.0 41.0 33.0 41.0 19 38.042086030002594 40.0 37.0 41.0 33.0 41.0 20 37.94516314207524 40.0 37.0 41.0 33.0 41.0 21 37.821114681279546 40.0 37.0 41.0 32.0 41.0 22 37.70268737198688 40.0 37.0 41.0 32.0 41.0 23 37.52001032046268 39.0 36.0 41.0 32.0 41.0 24 37.66206546038696 40.0 37.0 41.0 32.0 41.0 25 37.62195697884013 40.0 37.0 41.0 32.0 41.0 26 37.41623586406161 39.0 36.0 41.0 32.0 41.0 27 37.379631283319064 39.0 36.0 41.0 32.0 41.0 28 37.22598442271371 39.0 36.0 41.0 31.0 41.0 29 37.00032219032372 39.0 36.0 41.0 31.0 41.0 30 36.834612964821936 39.0 35.0 41.0 30.0 41.0 31 36.57823698362437 39.0 35.0 40.0 30.0 41.0 32 36.42053324767522 38.0 35.0 40.0 30.0 41.0 33 36.244997541435005 38.0 35.0 40.0 30.0 41.0 34 36.041053659599115 38.0 35.0 40.0 30.0 41.0 35 35.82782265788865 38.0 35.0 40.0 29.0 41.0 36 35.74984190308813 38.0 35.0 40.0 28.0 41.0 37 35.58784110766051 38.0 35.0 40.0 27.0 41.0 38 35.44499118838637 38.0 35.0 40.0 26.0 41.0 39 35.28986821637835 38.0 34.0 40.0 25.0 41.0 40 35.09130108815406 38.0 34.0 40.0 24.0 41.0 41 34.94244332416139 38.0 34.0 40.0 24.0 41.0 42 34.62612892215668 38.0 33.0 40.0 22.0 41.0 43 34.23235108502615 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 3.0 13 1.0 14 5.0 15 8.0 16 30.0 17 60.0 18 189.0 19 422.0 20 908.0 21 1926.0 22 3520.0 23 6157.0 24 10215.0 25 16125.0 26 23912.0 27 33745.0 28 45964.0 29 61905.0 30 77017.0 31 95430.0 32 117200.0 33 145190.0 34 180981.0 35 225878.0 36 300706.0 37 449924.0 38 580503.0 39 707206.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.77709680587514 20.94081519338064 14.819976966957341 22.462111033786876 2 18.24543706867743 23.994686776874772 36.000846640971396 21.759029513476406 3 19.01924487534249 24.388186830195004 34.122742844473805 22.469825449988704 4 12.827226573376253 16.041480221436156 36.703701266687695 34.427591938499894 5 11.873815488667748 39.074782189292975 35.11203568857485 13.939366633464426 6 31.525026635804682 37.98691985078115 13.336507696750838 17.151545816663333 7 25.294857628504186 34.33984855758244 20.951544066333607 19.413749747579764 8 27.548407151328647 34.16964519844039 18.75108787854527 19.530859771685694 9 24.414863151766877 14.422879013643819 22.163096372182334 38.99916146240697 10 16.320366091186344 28.15019644209828 32.81054657935331 22.71889088736207 11 32.815441019884716 22.908931316737398 23.738944155730078 20.53668350764781 12 21.816790394449768 27.851635569682088 30.64360596447544 19.68796807139271 13 32.407970742266215 21.112898536302975 26.24775009699744 20.23138062443337 14 20.335816964779152 23.149245105478435 28.74112720586114 27.77381072388127 15 22.152724047877353 30.37259657849435 25.844493576127835 21.630185797500463 16 21.18735237670467 28.676624314089537 26.77748414736091 23.358539161844885 17 21.43385714651524 27.069594730599945 27.110403344037355 24.38614477884746 18 23.047466673235807 25.316898817652273 30.392595716294892 21.243038792817035 19 22.61837658214411 24.493368681350205 31.958524964725992 20.92972977177969 20 23.591495083032076 24.298368984416555 31.31725601457052 20.792879917980844 21 22.267792020635742 25.06144791812865 32.24418525878787 20.42657480244774 22 20.65849349120443 25.7019713574747 31.627680232910542 22.011854918410325 23 21.922717756414393 25.85201351124895 32.4061879990263 19.81908073331036 24 21.483255341017713 25.815029692399 30.208260065287302 22.49345490129599 25 21.49502144640118 26.04675390007497 31.5268093790446 20.931415274479253 26 20.90020106102395 27.238047760015533 31.320497365915827 20.541253813044687 27 19.686444636260415 27.211241784389845 31.09250071228696 22.00981286706278 28 20.479214348295518 26.679044307003945 30.96534249901058 21.87639884568996 29 20.641703291235743 26.668250607024074 30.100809268190382 22.5892368335498 30 20.728539093776508 27.048169398207467 32.1033485428343 20.11994296518173 31 21.810761480947498 26.772135917641155 31.72258700030112 19.694515601110226 32 21.106059284964378 26.731975574472806 30.430000910819725 21.731964229743095 33 20.64231914799135 26.547769577519027 31.29946099568479 21.510450278804836 34 19.783166560404364 27.28138462750228 32.02591265919492 20.909536152898433 35 19.189480647997996 29.76435699854755 30.63663705908303 20.409525294371424 36 21.83960950792073 27.13970516019893 30.366178702830638 20.654506629049703 37 20.791453723388912 28.174538990701535 30.301773051599394 20.732234234310155 38 20.434678180811005 26.428098885850304 31.770559000211662 21.366663933127032 39 20.009218403226054 26.11307194859995 32.5531508690225 21.3245587791515 40 18.65109218954256 26.56537011532404 32.44041666923273 22.34312102590067 41 20.166845319148315 25.59925293334193 32.51571326098421 21.71818848652554 42 19.01905039426177 27.60098187014952 31.7799913326265 21.599976402962206 43 19.034219918557806 27.62850094307117 30.988842296264053 22.34843684210697 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 859.0 1 958.0 2 1057.0 3 2302.5 4 3548.0 5 3548.0 6 5297.5 7 7047.0 8 7492.0 9 7937.0 10 11930.5 11 15924.0 12 15924.0 13 28505.0 14 41086.0 15 72068.0 16 103050.0 17 94096.0 18 85142.0 19 85142.0 20 85288.0 21 85434.0 22 66217.5 23 47001.0 24 51914.0 25 56827.0 26 56827.0 27 62101.5 28 67376.0 29 71522.5 30 75669.0 31 81917.0 32 88165.0 33 88165.0 34 98154.5 35 108144.0 36 118033.0 37 127922.0 38 136100.5 39 144279.0 40 144279.0 41 150427.0 42 156575.0 43 165300.5 44 174026.0 45 187939.0 46 201852.0 47 201852.0 48 274259.0 49 346666.0 50 320194.0 51 293722.0 52 262709.0 53 231696.0 54 231696.0 55 203484.5 56 175273.0 57 148180.5 58 121088.0 59 107331.5 60 93575.0 61 93575.0 62 82379.0 63 71183.0 64 61146.0 65 51109.0 66 43304.5 67 35500.0 68 35500.0 69 30166.5 70 24833.0 71 20724.5 72 16616.0 73 13595.0 74 10574.0 75 10574.0 76 8463.0 77 6352.0 78 5035.5 79 3719.0 80 2907.5 81 2096.0 82 2096.0 83 1594.5 84 1093.0 85 838.0 86 583.0 87 449.5 88 316.0 89 316.0 90 227.0 91 138.0 92 95.0 93 52.0 94 36.5 95 21.0 96 21.0 97 13.0 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3085133.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.98256073505589 #Duplication Level Percentage of deduplicated Percentage of total 1 76.46604586614649 33.63172506477357 2 12.619165014887674 11.100463833859793 3 4.321669600148271 5.7023428699609795 4 1.9680135822177487 3.462331076292282 5 1.1123528936425535 2.446206435172439 6 0.6935725526748938 1.8303058153314762 7 0.4755410113744606 1.464085799035098 8 0.3175219620671347 1.117234318506549 9 0.25677164907623556 1.016412718548239 >10 1.5332770000300908 12.765405480295087 >50 0.1450213286477716 4.425500154702051 >100 0.07920435013882922 6.551474707605864 >500 0.005403454957491345 1.6529587343562788 >1k 0.005329435026550623 4.893276142991686 >5k 6.661793783188279E-4 2.1828379292064723 >10k+ 4.441195855458853E-4 5.757438919362051 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 56134 1.8195001641744455 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 41241 1.3367657083179234 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 40898 1.3256478732035215 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16079 0.5211768828118593 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 11376 0.3687361290420867 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 11120 0.3604382695981016 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9733 0.3154807264386981 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 9344 0.30287186970545515 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 9296 0.30131602105970795 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8470 0.27454245894747487 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7925 0.25687709411555354 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6289 0.20384858610633644 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5784 0.18747976181253773 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5124 0.16608684293351372 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5084 0.16479030239539105 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 4286 0.13892431865984384 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3845 0.12462995922704143 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3747 0.12145343490864088 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3704 0.12005965383015903 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3688 0.11954103761490996 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3638 0.11792036194225662 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3616 0.11720726464628917 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3504 0.11357695113954568 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3447 0.11172938087272088 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3318 0.10754803763727529 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3274 0.10612184304534035 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3154 0.10223222143097234 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3141 0.10181084575608247 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3121 0.10116257548702114 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.6206756726533345E-4 0.0 10 3.241351345306669E-5 0.0 0.0 1.9448108071840015E-4 0.0 11 3.241351345306669E-5 0.0 0.0 2.917216210776002E-4 0.0 12 3.241351345306669E-5 0.0 0.0 3.565486479837336E-4 0.0 13 3.241351345306669E-5 0.0 0.0 3.565486479837336E-4 0.0 14 3.241351345306669E-5 0.0 0.0 4.8620270179600036E-4 0.0 15 3.241351345306669E-5 0.0 0.0 6.158567556082672E-4 0.0 16 6.482702690613338E-5 0.0 0.0 9.724054035920007E-4 0.0 17 6.482702690613338E-5 0.0 0.0 0.0015234351322941345 0.0 18 6.482702690613338E-5 0.0 0.0 0.0018475702668248014 0.0 19 6.482702690613338E-5 0.0 0.0 0.002625494589698402 0.0 20 6.482702690613338E-5 0.0 0.0 0.004991681071772271 0.0 21 6.482702690613338E-5 0.0 0.0 0.011020594574042674 0.0 22 6.482702690613338E-5 0.0 0.0 0.016790199968688545 0.0 23 6.482702690613338E-5 0.0 0.0 0.020809475636868816 0.0 24 6.482702690613338E-5 0.0 0.0 0.026708735085326955 0.0 25 6.482702690613338E-5 0.0 0.0 0.03027422156516429 0.0 26 6.482702690613338E-5 0.0 0.0 0.03604382695981016 0.0 27 6.482702690613338E-5 0.0 0.0 0.08164964038827499 0.0 28 6.482702690613338E-5 0.0 0.0 0.19438384017804095 0.0 29 6.482702690613338E-5 0.0 0.0 0.37288505876407924 0.0 30 6.482702690613338E-5 0.0 0.0 0.6236035853235501 0.0 31 6.482702690613338E-5 0.0 0.0 0.9208679172016246 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 13335 0.0 23.209972 1 CCGTTTA 245 0.0 21.89796 27 GTATTGG 1305 0.0 21.264368 1 ACCGTTA 240 0.0 20.812498 8 ATTGGAC 1420 0.0 19.411972 3 GACCGTT 250 0.0 19.240002 7 TTGGACC 1895 0.0 19.134565 4 TGTTACG 140 9.458745E-11 18.5 16 GCCGTTT 280 0.0 18.5 26 GACCCTC 1925 0.0 17.77922 7 GGACCCT 1970 0.0 17.654823 6 CCGTTAT 280 0.0 17.178572 9 TGGACCC 2020 0.0 17.126236 5 GTTACGG 300 0.0 16.65 17 GGACCGT 345 0.0 16.623188 6 TATTGGA 1640 0.0 16.469511 2 ACGTTTA 225 0.0 16.444445 26 CGTTTAC 305 0.0 16.37705 28 TATACCG 215 0.0 16.348837 5 CAATGCG 175 1.3278623E-10 15.857143 19 >>END_MODULE