##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088527_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3120183 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78489050161481 31.0 31.0 34.0 30.0 34.0 2 31.94895844250161 31.0 31.0 34.0 30.0 34.0 3 32.067924541605414 33.0 31.0 34.0 30.0 34.0 4 35.732805095085766 37.0 35.0 37.0 35.0 37.0 5 35.648145958105665 37.0 35.0 37.0 33.0 37.0 6 35.697199170689665 37.0 35.0 37.0 33.0 37.0 7 35.55261085647861 37.0 35.0 37.0 33.0 37.0 8 35.585639047453306 37.0 35.0 37.0 33.0 37.0 9 37.205742740089285 39.0 37.0 39.0 33.0 39.0 10 37.06374658153064 39.0 37.0 39.0 33.0 39.0 11 37.13257619825504 39.0 37.0 39.0 33.0 39.0 12 36.9839852341994 39.0 37.0 39.0 33.0 39.0 13 37.03394095795022 39.0 37.0 39.0 33.0 39.0 14 38.07186629758575 40.0 37.0 41.0 33.0 41.0 15 38.07509014695612 40.0 37.0 41.0 33.0 41.0 16 37.97915186384901 40.0 37.0 41.0 33.0 41.0 17 38.0129127041587 40.0 37.0 41.0 33.0 41.0 18 37.981164886803114 40.0 37.0 41.0 33.0 41.0 19 38.0472901749673 40.0 37.0 41.0 33.0 41.0 20 37.946291611742005 40.0 37.0 41.0 33.0 41.0 21 37.81728956282372 40.0 37.0 41.0 32.0 41.0 22 37.69675592745682 40.0 37.0 41.0 32.0 41.0 23 37.52796935307961 39.0 36.0 41.0 32.0 41.0 24 37.67840924714993 40.0 37.0 41.0 32.0 41.0 25 37.63399262158662 40.0 37.0 41.0 32.0 41.0 26 37.4391303330606 39.0 36.0 41.0 32.0 41.0 27 37.39290323676528 39.0 36.0 41.0 32.0 41.0 28 37.245801287937276 39.0 36.0 41.0 31.0 41.0 29 37.02859031024783 39.0 36.0 41.0 31.0 41.0 30 36.878909987010374 39.0 35.0 41.0 31.0 41.0 31 36.6449624909821 39.0 35.0 40.0 30.0 41.0 32 36.49177371968247 39.0 35.0 40.0 30.0 41.0 33 36.32521457876028 38.0 35.0 40.0 30.0 41.0 34 36.134316160302134 38.0 35.0 40.0 30.0 41.0 35 35.937489563913395 38.0 35.0 40.0 29.0 41.0 36 35.869409262213146 38.0 35.0 40.0 28.0 41.0 37 35.72339667256696 38.0 35.0 40.0 27.0 41.0 38 35.58733670428946 38.0 35.0 40.0 27.0 41.0 39 35.44513414758045 38.0 35.0 40.0 26.0 41.0 40 35.25981008165226 38.0 34.0 40.0 25.0 41.0 41 35.1305827254363 38.0 34.0 40.0 24.0 41.0 42 34.84281082231395 38.0 34.0 40.0 23.0 41.0 43 34.45515695714001 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 5.0 14 5.0 15 16.0 16 43.0 17 91.0 18 216.0 19 439.0 20 937.0 21 2004.0 22 3673.0 23 6257.0 24 10012.0 25 15538.0 26 22961.0 27 32939.0 28 45213.0 29 59572.0 30 75627.0 31 93575.0 32 116162.0 33 144378.0 34 182277.0 35 228220.0 36 303115.0 37 448161.0 38 594906.0 39 733835.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.91167633436885 20.658660085001422 14.38117571950107 23.04848786112866 2 18.526445404003546 23.618037788168195 35.3634386188246 22.49207818900366 3 19.182176173641096 24.01557857343624 33.599599767064944 23.20264548585772 4 13.283419594299437 16.202575297666836 36.23672073080329 34.27728437723044 5 12.470422407916459 38.58462788881293 34.90926653981513 14.035683163455476 6 32.1837853741271 37.72592825484916 13.676281166841816 16.414005204181933 7 25.872713235089094 33.842502186570464 20.96742402609078 19.31736055224966 8 27.699304816416216 34.04290709871825 18.80110878111957 19.456679303745965 9 24.864310843306306 14.44815897016297 21.506270625793423 39.1812595607373 10 16.518870848280372 28.12982443657952 32.6495272873418 22.701777427798305 11 33.70962536492251 22.727577196593916 23.08265252390645 20.480144914577124 12 21.736994272451327 27.612162491751285 30.34248311717614 20.308360118621245 13 32.12798736484366 20.98591653117782 25.722209242214316 21.163886861764198 14 20.651929710533004 22.822475476598648 28.14533634725912 28.380258465609227 15 22.844653662942203 30.17925551161583 24.964240879461236 22.01184994598073 16 21.84423157231483 28.313275214947332 26.223878535329497 23.618614677408345 17 21.861378002508186 27.187059220564947 26.867590779130584 24.083971997796283 18 23.069993010025375 25.54824508690676 29.545831125930754 21.83593077713711 19 23.02464310586911 24.97331086029249 30.827967462164878 21.174078571673522 20 23.663163346508842 24.823031213233328 30.190440752994295 21.323364687263535 21 22.58704056781285 25.472864892860454 30.914789292807505 21.025305246519192 22 21.444992168728565 26.05533072899891 30.331906814440053 22.16777028783248 23 22.2867697183146 26.06584293293054 30.888572881782896 20.75881446697197 24 21.917977246847382 26.21461625808486 29.21020978577218 22.657196709295576 25 21.972204835421515 26.157760618527824 30.365718933793307 21.504315612257358 26 21.444255032477262 27.226576133515245 30.254090865824217 21.075077968183276 27 20.531488056950504 27.129530543561064 29.96503730710667 22.373944092381763 28 21.13215795355593 26.90380660365113 29.853216942724192 22.110818500068746 29 21.318717523940105 26.909575496052636 29.125503215676773 22.64620376433049 30 21.298654598143763 27.185713145671265 30.781335581919393 20.73429667426558 31 22.13841303538927 26.9963332278908 30.348284058979875 20.516969677740054 32 21.408231504370097 26.904223245880125 29.568490053307773 22.119055196442 33 21.0457527651423 26.709426979122696 30.308703047225116 21.936117208509888 34 20.430211945901892 27.121229748383346 30.95914566549462 21.48941264022014 35 19.990558246102875 29.131816947916196 29.87260683107369 21.005017974907243 36 22.08796727627835 27.077257968523 29.580284233328623 21.254490521870032 37 21.06687332121225 27.792632675711648 29.632204264942153 21.50828973813395 38 20.777563367276855 26.36415876889272 30.906392349423093 21.95188551440733 39 20.388099031370917 26.171509812084743 31.630003752985004 21.810387403559343 40 19.34585247083264 26.492228180206094 31.668719430879534 22.49319991808173 41 20.364991412362674 25.499754341331904 31.862329869754436 22.27292437655099 42 19.402611962182988 27.17882252419169 31.17903661419859 22.239528899426734 43 19.34364106207873 26.890057410094215 30.855786343301016 22.910515184526037 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 854.0 1 846.0 2 838.0 3 2043.5 4 3249.0 5 3249.0 6 4775.5 7 6302.0 8 6780.0 9 7258.0 10 10757.5 11 14257.0 12 14257.0 13 25741.5 14 37226.0 15 64252.0 16 91278.0 17 83590.0 18 75902.0 19 75902.0 20 76521.5 21 77141.0 22 61111.0 23 45081.0 24 50250.5 25 55420.0 26 55420.0 27 61105.5 28 66791.0 29 71987.0 30 77183.0 31 84598.0 32 92013.0 33 92013.0 34 102746.5 35 113480.0 36 123400.5 37 133321.0 38 142434.5 39 151548.0 40 151548.0 41 156756.5 42 161965.0 43 170881.5 44 179798.0 45 191481.0 46 203164.0 47 203164.0 48 259138.5 49 315113.0 50 296462.5 51 277812.0 52 251889.5 53 225967.0 54 225967.0 55 203261.0 56 180555.0 57 158228.0 58 135901.0 59 122596.0 60 109291.0 61 109291.0 62 97192.5 63 85094.0 64 74202.0 65 63310.0 66 53854.0 67 44398.0 68 44398.0 69 38002.5 70 31607.0 71 27023.5 72 22440.0 73 18478.5 74 14517.0 75 14517.0 76 11661.0 77 8805.0 78 7000.5 79 5196.0 80 4096.0 81 2996.0 82 2996.0 83 2249.0 84 1502.0 85 1132.5 86 763.0 87 601.0 88 439.0 89 439.0 90 345.0 91 251.0 92 165.5 93 80.0 94 66.5 95 53.0 96 53.0 97 36.5 98 20.0 99 12.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3120183.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.17021411885826 #Duplication Level Percentage of deduplicated Percentage of total 1 76.70019339209153 35.41264351870703 2 12.488123569146829 11.531586782605391 3 4.372999483439792 6.057069674762153 4 2.0311403584723275 3.7511274102448757 5 1.1042099650719883 2.5490805259775353 6 0.6566342802862218 1.819016719115835 7 0.4382727253249891 1.416460189949721 8 0.3095555644613575 1.1433797354291926 9 0.2392040089102734 0.9939690278528942 >10 1.4349527426796131 12.479762054365102 >50 0.1322917971994729 4.252435328815152 >100 0.08168777436881826 7.072318704505418 >500 0.005715686758726615 1.7801935533953446 >1k 0.004251913320418392 3.869465472598673 >5k 4.879244793922745E-4 1.576029335008668 >10k+ 2.7881398822415685E-4 4.2954619666669105 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 48960 1.5691387332089177 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 35862 1.1493556627928554 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34634 1.1099989968537103 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14017 0.44923647106595993 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8469 0.2714263874907337 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7946 0.25466455012414335 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7039 0.22559574230101245 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7039 0.22559574230101245 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 6333 0.20296886432622702 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6191 0.19841784920948546 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5955 0.19085419028306994 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4627 0.14829258412086727 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4324 0.13858161524500326 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3926 0.1258259531572347 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3625 0.11617908308583183 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3403 0.10906411579064434 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3254 0.10428875485828876 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.40988044611486E-5 2 0.0 0.0 0.0 0.0 6.40988044611486E-5 3 0.0 0.0 0.0 0.0 6.40988044611486E-5 4 0.0 0.0 0.0 0.0 6.40988044611486E-5 5 0.0 0.0 0.0 0.0 6.40988044611486E-5 6 0.0 0.0 0.0 0.0 1.6024701115287149E-4 7 0.0 0.0 0.0 0.0 1.6024701115287149E-4 8 6.40988044611486E-5 0.0 0.0 0.0 1.6024701115287149E-4 9 6.40988044611486E-5 0.0 0.0 0.0 1.6024701115287149E-4 10 1.281976089222972E-4 0.0 0.0 3.20494022305743E-5 1.6024701115287149E-4 11 1.281976089222972E-4 0.0 0.0 6.40988044611486E-5 1.6024701115287149E-4 12 1.281976089222972E-4 0.0 0.0 2.2434581561402007E-4 1.6024701115287149E-4 13 1.281976089222972E-4 0.0 0.0 2.884446200751687E-4 2.563952178445944E-4 14 1.6024701115287149E-4 0.0 0.0 4.1664222899746585E-4 2.563952178445944E-4 15 1.9229641338344578E-4 0.0 0.0 5.127904356891888E-4 3.2049402230574297E-4 16 1.9229641338344578E-4 0.0 0.0 6.089386423809117E-4 3.2049402230574297E-4 17 1.9229641338344578E-4 0.0 0.0 8.012350557643574E-4 3.2049402230574297E-4 18 1.9229641338344578E-4 0.0 0.0 0.0010576302736089518 3.2049402230574297E-4 19 2.2434581561402007E-4 0.0 0.0 0.0016665689159898634 3.5254342453631726E-4 20 2.2434581561402007E-4 0.0 0.0 0.003140841418596281 3.5254342453631726E-4 21 2.2434581561402007E-4 0.0 0.0 0.005993238217117393 3.5254342453631726E-4 22 2.563952178445944E-4 0.0 0.0 0.010480154529397795 3.5254342453631726E-4 23 2.563952178445944E-4 0.0 0.0 0.012851810294460293 3.5254342453631726E-4 24 2.563952178445944E-4 0.0 0.0 0.01679388676882093 3.5254342453631726E-4 25 3.2049402230574297E-4 0.0 0.0 0.02012702460080066 3.5254342453631726E-4 26 3.2049402230574297E-4 0.0 0.0 0.0261843616223792 3.5254342453631726E-4 27 3.2049402230574297E-4 0.0 0.0 0.06887416539350416 4.1664222899746585E-4 28 3.2049402230574297E-4 0.0 0.0 0.180309936949211 4.1664222899746585E-4 29 3.2049402230574297E-4 0.0 0.0 0.3577354276976703 4.1664222899746585E-4 30 3.5254342453631726E-4 0.0 0.0 0.5940997691481558 4.1664222899746585E-4 31 3.5254342453631726E-4 0.0 0.0 0.9020624751817441 4.1664222899746585E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12340 0.0 21.693274 1 GTATTAG 535 0.0 18.327103 1 ATTGGAC 935 0.0 18.005348 3 GTATTGG 910 0.0 17.89011 1 TTAACGG 210 0.0 16.738094 35 TTGGACC 1395 0.0 16.046595 4 GGACCCT 1300 0.0 15.938461 6 TGGACCC 1430 0.0 15.265734 5 TATACAC 1540 0.0 15.136365 37 ATTAGAG 455 0.0 15.043956 3 TAGACCG 75 0.0041065044 14.8 5 TATACAG 415 0.0 14.710843 5 TAACGGC 295 0.0 14.423729 36 ACCGTTA 180 3.3378456E-9 14.388888 8 TCTACGC 130 4.4495555E-6 14.230769 3 CGTATAC 170 2.4412657E-8 14.147059 3 TAGGGGT 275 0.0 14.127272 4 GACCCTC 1420 0.0 13.940142 7 GATCGCA 200 9.858923E-10 13.875001 10 GTATCAA 19785 0.0 13.502148 2 >>END_MODULE