##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088524_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1535108 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72909332763558 31.0 31.0 34.0 30.0 34.0 2 31.89019599923914 31.0 31.0 34.0 30.0 34.0 3 32.01101160309242 33.0 31.0 34.0 30.0 34.0 4 35.67631137353202 37.0 35.0 37.0 33.0 37.0 5 35.59596458359933 37.0 35.0 37.0 33.0 37.0 6 35.64698053817712 37.0 35.0 37.0 33.0 37.0 7 35.49894209397645 37.0 35.0 37.0 33.0 37.0 8 35.54459034804066 37.0 35.0 37.0 33.0 37.0 9 37.139234503370446 39.0 37.0 39.0 33.0 39.0 10 37.00492994629694 39.0 37.0 39.0 33.0 39.0 11 37.06561818451861 39.0 37.0 39.0 33.0 39.0 12 36.9126986505184 39.0 37.0 39.0 33.0 39.0 13 36.96012072114796 39.0 37.0 39.0 33.0 39.0 14 37.96933831365611 40.0 37.0 41.0 33.0 41.0 15 37.97765499235233 40.0 37.0 41.0 33.0 41.0 16 37.87559767781811 40.0 37.0 41.0 32.0 41.0 17 37.928476693496485 40.0 37.0 41.0 33.0 41.0 18 37.89995948167816 40.0 37.0 41.0 33.0 41.0 19 37.97342336825813 40.0 37.0 41.0 33.0 41.0 20 37.876669915080896 40.0 37.0 41.0 32.0 41.0 21 37.74267282823098 40.0 37.0 41.0 32.0 41.0 22 37.62850431370301 40.0 37.0 41.0 32.0 41.0 23 37.44978008061973 39.0 36.0 41.0 32.0 41.0 24 37.60080919388082 39.0 37.0 41.0 32.0 41.0 25 37.545836514434164 39.0 36.0 41.0 32.0 41.0 26 37.335831094620055 39.0 36.0 41.0 31.0 41.0 27 37.293510293738294 39.0 36.0 41.0 31.0 41.0 28 37.1296814295802 39.0 36.0 41.0 31.0 41.0 29 36.91028969948694 39.0 35.0 41.0 31.0 41.0 30 36.752836282528655 39.0 35.0 41.0 30.0 41.0 31 36.47001969893975 39.0 35.0 40.0 30.0 41.0 32 36.30582213108133 38.0 35.0 40.0 30.0 41.0 33 36.12635723349758 38.0 35.0 40.0 30.0 41.0 34 35.923069256365025 38.0 35.0 40.0 29.0 41.0 35 35.71416473629217 38.0 35.0 40.0 28.0 41.0 36 35.63823196804394 38.0 35.0 40.0 27.0 41.0 37 35.47631111296404 38.0 35.0 40.0 26.0 41.0 38 35.329387899743864 38.0 34.0 40.0 25.0 41.0 39 35.19129142705269 38.0 34.0 40.0 25.0 41.0 40 34.9956465603723 38.0 34.0 40.0 24.0 41.0 41 34.84486954663776 38.0 34.0 40.0 23.0 41.0 42 34.53484771104053 38.0 33.0 40.0 22.0 41.0 43 34.12584912592469 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 1.0 13 3.0 14 3.0 15 8.0 16 24.0 17 43.0 18 83.0 19 201.0 20 505.0 21 993.0 22 1953.0 23 3487.0 24 5552.0 25 8547.0 26 12656.0 27 18000.0 28 24462.0 29 32221.0 30 39539.0 31 48590.0 32 59565.0 33 72933.0 34 91264.0 35 113039.0 36 148927.0 37 220150.0 38 285162.0 39 347194.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.00695195386904 21.506825578395787 15.153591799404342 22.33263066833083 2 18.298712533580698 23.9880190839993 36.022221237854275 21.691047144565726 3 19.015991057306717 24.45293751319125 33.84712997391715 22.683941455584883 4 13.170604283216555 16.580657517256114 36.4789317754842 33.76980642404313 5 12.016418388803915 39.242385552026306 34.85852461194913 13.882671447220652 6 31.46423574106838 38.51924424861313 13.662882350948596 16.353637659369895 7 24.890756871829215 34.572551247208665 21.285733642193254 19.250958238768867 8 27.182973445516538 34.67104594595299 18.950002214827883 19.195978393702593 9 24.413266037308123 14.779416171370352 22.32878729053591 38.47853050078561 10 16.348426299647972 28.627953212412415 32.701347397056104 22.322273090883506 11 32.84251010352366 23.185860538802483 23.59729738884821 20.374331968825647 12 21.36807312579962 28.3073894475177 30.735231657968036 19.58930576871464 13 31.777829312335026 21.614114446670854 26.20825375152758 20.39980248946654 14 20.221639128973337 23.538865017966163 28.857578750159597 27.381917102900903 15 22.061444536801318 30.749953749182467 25.85544469835347 21.333157015662742 16 20.97839370259291 29.004604236314318 26.89107215909239 23.12592990200038 17 21.142160681854307 27.589720071812536 27.56177415530373 23.706345091029426 18 22.48714748408581 25.98983263718253 30.465739218348155 21.057280660383505 19 22.30852812961694 25.30766564958296 31.96765309020603 20.41615313059407 20 23.074337440753354 25.026252224599183 31.33258376609333 20.566826568554134 21 21.86634425721187 25.85042876462112 31.978466661629017 20.30476031653799 22 20.52142259697689 26.336127490704236 31.62148852067737 21.5209613916415 23 21.646229450957197 26.3086375681711 32.133895465335335 19.911237515536367 24 21.177402501973802 26.605033652355402 30.28027995424426 21.93728389142653 25 21.222936757544094 26.639102916537468 31.53224398543946 20.605716340478978 26 20.629167459227624 27.698051212031988 31.33271405008638 20.340067278654008 27 19.620378501056603 27.46060863470192 31.19689298733379 21.722119876907684 28 20.415566852625354 27.192679602998616 30.98980658038392 21.40194696399211 29 20.45165551869966 27.14180370371335 30.236374248587072 22.170166528999914 30 20.706947003077307 27.424063974651947 31.919317728785206 19.94967129348554 31 21.45275772128085 27.1305341383147 31.544295254796406 19.87241288560805 32 20.69242033785245 27.07796454711981 30.69262879224133 21.53698632278641 33 20.39543797569943 26.758182486183387 31.532634837418605 21.313744700698585 34 19.736070686883266 27.049692920628388 32.31674904957827 20.897487342910075 35 19.235389301599625 28.975225195881983 31.114748929716995 20.67463657280139 36 21.42735234263648 26.93445672877739 30.961925805871637 20.676265122714494 37 20.44370819512373 27.620923088147542 30.86304025514817 21.072328461580554 38 20.08842374608171 26.10005289530118 32.32821404096649 21.483309317650615 39 19.533348793700508 25.877462693178593 33.096433605974305 21.4927549071466 40 18.429778230587033 26.165455459811298 33.13636564984353 22.268400659758143 41 19.386909585514505 25.473647456726173 33.26052629521832 21.878916662541005 42 18.53784880282039 27.286353794000163 32.364628417023425 21.811168986156023 43 18.492640257232715 27.099265979983166 31.916842332917295 22.491251429866825 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 576.0 1 519.5 2 463.0 3 1106.5 4 1750.0 5 1750.0 6 2619.0 7 3488.0 8 3704.5 9 3921.0 10 5963.0 11 8005.0 12 8005.0 13 14334.0 14 20663.0 15 35709.0 16 50755.0 17 46258.0 18 41761.0 19 41761.0 20 41979.5 21 42198.0 22 33364.5 23 24531.0 24 27297.0 25 30063.0 26 30063.0 27 32692.5 28 35322.0 29 37838.0 30 40354.0 31 44305.0 32 48256.0 33 48256.0 34 53532.5 35 58809.0 36 63925.5 37 69042.0 38 72716.5 39 76391.0 40 76391.0 41 78913.0 42 81435.0 43 86981.0 44 92527.0 45 98294.5 46 104062.0 47 104062.0 48 133604.5 49 163147.0 50 149776.0 51 136405.0 52 121655.0 53 106905.0 54 106905.0 55 94733.5 56 82562.0 57 71056.5 58 59551.0 59 52765.5 60 45980.0 61 45980.0 62 40071.5 63 34163.0 64 29238.5 65 24314.0 66 20651.0 67 16988.0 68 16988.0 69 14275.0 70 11562.0 71 9682.0 72 7802.0 73 6387.5 74 4973.0 75 4973.0 76 3958.5 77 2944.0 78 2286.0 79 1628.0 80 1239.0 81 850.0 82 850.0 83 640.5 84 431.0 85 353.5 86 276.0 87 198.0 88 120.0 89 120.0 90 100.5 91 81.0 92 55.0 93 29.0 94 22.0 95 15.0 96 15.0 97 11.0 98 7.0 99 5.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1535108.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.16781387813174 #Duplication Level Percentage of deduplicated Percentage of total 1 81.92866442995175 42.740393172656354 2 10.23711190780825 10.680954973122939 3 3.0789012263551707 4.818586383769443 4 1.3316766368674582 2.7788263575183194 5 0.7583783798269946 1.9781471084006876 6 0.5029441013275221 1.5742496561495043 7 0.33974415719705836 1.2406596971187211 8 0.24844260026822684 1.0368565864153552 9 0.18972815872274504 0.8907932944519921 >10 1.2133552542078474 12.003556202233872 >50 0.10358395243252826 3.737517870601891 >100 0.05734888626398767 5.506786497428973 >500 0.005372509594172786 1.9468480870846918 >1k 0.004248030841904063 4.298265663490575 >5k 1.2494208358541364E-4 0.5025343584125004 >10k+ 3.7482625075624084E-4 4.265024091144223 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27057 1.7625469999504921 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 19267 1.2550908470283524 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19111 1.2449286955706047 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7710 0.5022447932002179 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4870 0.3172415230719923 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4137 0.2694924396198834 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3936 0.2563988983185548 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3886 0.25314179849235363 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3446 0.22447932002178347 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3074 0.20024649731484692 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2944 0.19177803776672392 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2516 0.16389726325444204 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2367 0.15419110577236259 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1959 0.1276131711905612 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1900 0.12376979339564383 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1778 0.11582246981971302 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1767 0.11510590785794876 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1708 0.1112625300630314 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1590 0.10357577447319669 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1541 0.10038381664351954 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.954259895720692E-4 0.0 10 0.0 0.0 0.0 4.5599397566816147E-4 0.0 11 0.0 0.0 0.0 7.165619617642537E-4 0.0 12 0.0 0.0 0.0 8.468459548122999E-4 0.0 13 0.0 0.0 0.0 9.119879513363229E-4 0.0 14 0.0 0.0 0.0 0.001042271944384369 0.0 15 0.0 0.0 0.0 0.0013028399304804612 0.0 16 0.0 0.0 0.0 0.001889117899196669 0.0 17 0.0 6.514199652402307E-5 0.0 0.0028011058505329916 0.0 18 0.0 1.3028399304804614E-4 0.0 0.0031919578296771304 0.0 19 0.0 1.3028399304804614E-4 0.0 0.003973661787965407 0.0 20 0.0 1.3028399304804614E-4 0.0 0.008468459548122998 0.0 21 0.0 1.3028399304804614E-4 0.0 0.014070671249188982 0.0 22 0.0 1.3028399304804614E-4 0.0 0.02312540876602819 0.0 23 0.0 1.954259895720692E-4 0.0 0.028401910484474057 0.0 24 0.0 1.954259895720692E-4 0.0 0.03608866607430878 0.0 25 0.0 1.954259895720692E-4 0.0 0.039410907897033956 0.0 26 0.0 1.954259895720692E-4 0.0 0.04787936744515695 0.0 27 0.0 1.954259895720692E-4 0.0 0.10181694056704806 0.0 28 0.0 1.954259895720692E-4 0.0 0.2509921126070609 0.0 29 0.0 1.954259895720692E-4 0.0 0.4595116434804587 0.0 30 0.0 1.954259895720692E-4 0.0 0.7684801329939001 0.0 31 0.0 1.954259895720692E-4 0.0 1.24825093739333 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5915 0.0 23.363482 1 TGCGACG 80 2.7273927E-8 23.125 22 TATACCG 105 9.840733E-10 21.142857 5 GTATTGG 510 0.0 20.67647 1 CAATGCG 90 9.483483E-8 20.555555 19 CGACGAG 100 1.290573E-8 20.35 24 ACGTTTA 75 9.269097E-6 19.733334 26 TTGGACC 750 0.0 18.500002 4 CCGATCG 80 1.6172467E-5 18.5 12 CGATCGT 80 1.6172467E-5 18.5 13 ATTGGAC 545 0.0 17.990826 3 CCGTCGG 95 3.6079819E-6 17.526316 24 CGACCTA 85 2.72408E-5 17.411764 13 ACGAGTC 100 5.880376E-6 16.650002 26 TACCGAC 345 0.0 16.623188 7 TGGACCC 795 0.0 16.522015 5 GGACCCT 795 0.0 16.522015 6 CTAGACC 90 4.4475208E-5 16.444445 3 TAGTTCG 80 3.3834908E-4 16.1875 7 TATACGG 115 1.2427827E-6 16.086956 2 >>END_MODULE