##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088520_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3785508 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.75370967384034 31.0 31.0 34.0 30.0 34.0 2 31.90554715509781 31.0 31.0 34.0 30.0 34.0 3 32.01851006522771 33.0 31.0 34.0 30.0 34.0 4 35.68854827410218 37.0 35.0 37.0 35.0 37.0 5 35.61097083931668 37.0 35.0 37.0 33.0 37.0 6 35.66405618479739 37.0 35.0 37.0 33.0 37.0 7 35.52027944466106 37.0 35.0 37.0 33.0 37.0 8 35.562211729575 37.0 35.0 37.0 33.0 37.0 9 37.163598386266784 39.0 37.0 39.0 33.0 39.0 10 37.03528747000403 39.0 37.0 39.0 33.0 39.0 11 37.09026371097353 39.0 37.0 39.0 33.0 39.0 12 36.94093580042626 39.0 37.0 39.0 33.0 39.0 13 37.00325504529379 39.0 37.0 39.0 33.0 39.0 14 38.01260913990936 40.0 37.0 41.0 33.0 41.0 15 38.016163484531006 40.0 37.0 41.0 33.0 41.0 16 37.90442973571843 40.0 37.0 41.0 33.0 41.0 17 37.96727440544307 40.0 37.0 41.0 33.0 41.0 18 37.943633985187724 40.0 37.0 41.0 33.0 41.0 19 38.012866965279166 40.0 37.0 41.0 33.0 41.0 20 37.92084470565113 40.0 37.0 41.0 32.0 41.0 21 37.79811084800244 40.0 37.0 41.0 32.0 41.0 22 37.69074771470566 40.0 37.0 41.0 32.0 41.0 23 37.53547581988996 39.0 36.0 41.0 32.0 41.0 24 37.67817925625834 40.0 37.0 41.0 32.0 41.0 25 37.62323075264931 40.0 37.0 41.0 32.0 41.0 26 37.4183752880723 39.0 36.0 41.0 32.0 41.0 27 37.3825703181713 39.0 36.0 41.0 32.0 41.0 28 37.23068740047571 39.0 36.0 41.0 31.0 41.0 29 37.01491926578942 39.0 36.0 41.0 31.0 41.0 30 36.874290848150366 39.0 35.0 41.0 31.0 41.0 31 36.6043854616078 39.0 35.0 40.0 30.0 41.0 32 36.4455394097701 38.0 35.0 40.0 30.0 41.0 33 36.27232910351794 38.0 35.0 40.0 30.0 41.0 34 36.08353013651008 38.0 35.0 40.0 30.0 41.0 35 35.87986051013497 38.0 35.0 40.0 29.0 41.0 36 35.785528124626865 38.0 35.0 40.0 28.0 41.0 37 35.63495335368463 38.0 35.0 40.0 27.0 41.0 38 35.478721217865605 38.0 35.0 40.0 26.0 41.0 39 35.33565587498428 38.0 35.0 40.0 25.0 41.0 40 35.133189521723374 38.0 34.0 40.0 24.0 41.0 41 34.973816724201875 38.0 34.0 40.0 24.0 41.0 42 34.66407758218976 38.0 34.0 40.0 22.0 41.0 43 34.25813100910102 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 7.0 14 9.0 15 19.0 16 45.0 17 93.0 18 226.0 19 513.0 20 1132.0 21 2411.0 22 4474.0 23 7721.0 24 12700.0 25 19698.0 26 29373.0 27 41430.0 28 56782.0 29 75090.0 30 95132.0 31 117571.0 32 144145.0 33 178048.0 34 222103.0 35 276857.0 36 366515.0 37 544261.0 38 704193.0 39 884956.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.534768913445696 21.062536388775296 14.96673630064974 22.435958397129262 2 18.293264734878385 24.08717667483466 35.6846425895811 21.93491600070585 3 18.989498899487202 24.291719895982254 34.1236103582399 22.595170846290642 4 12.993209894154232 16.35238916414917 36.2743388734088 34.3800620682878 5 12.023485355201997 39.21338958998369 34.78389162035848 13.979233434455823 6 31.663385733169765 38.23262293990661 13.413708279047357 16.69028304787627 7 25.12524078670551 34.56297014826015 20.966406622308025 19.345382442726315 8 27.653725735092888 34.20307129188473 18.73093386673598 19.412269106286395 9 24.42971986850906 14.553211880677575 22.108921708790472 38.90814654202289 10 16.26936199844248 28.687748117293637 32.71259762230063 22.330292261963255 11 33.0437288733771 23.009831177215844 23.474841421547648 20.471598527859406 12 21.79791985646312 28.200019653901144 30.536139403218804 19.465921086416934 13 32.39142540446355 21.38909757950584 25.91628389109203 20.30319312493858 14 20.331273900358948 23.402803533898226 28.97151452328195 27.294408042460876 15 22.175121542471974 30.69572168385326 25.678825668840222 21.45033110483454 16 21.05643416946946 28.744015334269534 26.897314706507025 23.30223578975398 17 21.459418392458822 27.463473858726488 27.256764481807988 23.8203432670067 18 22.769731301584887 25.599734566668463 30.434145166249817 21.196388965496837 19 22.447660921598896 24.969436070403233 32.07831022943288 20.50459277856499 20 23.239443688931576 24.659358796758585 31.367546971238735 20.733650543071104 21 21.958373882712703 25.462210091749903 32.25928990243846 20.320126123098934 22 20.597394061774533 26.134801458615332 31.601782376367982 21.666022103242156 23 21.84631494636915 26.135910953034575 32.050097371343554 19.967676729252716 24 21.222937581957297 26.26168007041591 30.379621440504156 22.135760907122638 25 21.42462781745541 26.30188603484658 31.5429791721481 20.73050697554991 26 20.59982438288335 27.526239543015095 31.478152998223752 20.395783075877798 27 19.588863634682586 27.297525193448273 31.193065765545867 21.92054540632327 28 20.428698076982005 27.053225088944473 30.99243219139941 21.525644642674113 29 20.50567585645044 27.054545915634044 30.19343771034165 22.246340517573863 30 20.66362031198983 27.34370129451582 32.07189101172154 19.920787381772804 31 21.60352058429146 27.219675668364722 31.496089824668182 19.680713922675636 32 20.833663540005727 27.07781888190436 30.625136705562372 21.463380872527544 33 20.38651087251698 26.8684942681405 31.430708903534217 21.31428595580831 34 19.703564224405284 27.30230658606454 32.25345184847054 20.74067734105964 35 19.119547495342765 29.507083329370854 31.01258800668233 20.360781168604056 36 21.53246010839232 27.431324937102232 30.62392154500796 20.412293409497483 37 20.543055251765416 28.325551022478358 30.48034768385115 20.651046041905076 38 20.215886480757668 26.657558245815355 31.91912419680529 21.207431076621685 39 19.731090252616028 26.425488996457013 32.740625564653406 21.102795186273546 40 18.53138337047498 26.704289094092527 32.67115008078176 22.093177454650736 41 19.70810786821742 25.88712003778621 32.94001756171166 21.4647545322847 42 18.862646704220413 27.663024354987492 31.972142180124834 21.50218676066726 43 18.722876823929578 27.50183066579175 31.573067604136618 22.202224906142057 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1681.0 1 1464.0 2 1247.0 3 2792.0 4 4337.0 5 4337.0 6 6367.0 7 8397.0 8 9058.5 9 9720.0 10 15045.0 11 20370.0 12 20370.0 13 36418.5 14 52467.0 15 91376.5 16 130286.0 17 118863.5 18 107441.0 19 107441.0 20 108115.0 21 108789.0 22 85834.5 23 62880.0 24 68990.0 25 75100.0 26 75100.0 27 82368.0 28 89636.0 29 94890.5 30 100145.0 31 107863.0 32 115581.0 33 115581.0 34 126594.0 35 137607.0 36 149949.0 37 162291.0 38 171284.0 39 180277.0 40 180277.0 41 186037.0 42 191797.0 43 201513.5 44 211230.0 45 227578.5 46 243927.0 47 243927.0 48 321472.5 49 399018.0 50 369420.5 51 339823.0 52 303100.0 53 266377.0 54 266377.0 55 237482.5 56 208588.0 57 178100.5 58 147613.0 59 132076.5 60 116540.0 61 116540.0 62 103042.0 63 89544.0 64 77812.0 65 66080.0 66 56407.0 67 46734.0 68 46734.0 69 39957.0 70 33180.0 71 27942.0 72 22704.0 73 18632.5 74 14561.0 75 14561.0 76 11678.5 77 8796.0 78 6936.0 79 5076.0 80 3985.0 81 2894.0 82 2894.0 83 2141.5 84 1389.0 85 1035.0 86 681.0 87 533.0 88 385.0 89 385.0 90 288.0 91 191.0 92 133.5 93 76.0 94 53.0 95 30.0 96 30.0 97 24.0 98 18.0 99 11.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3785508.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.03243201623864 #Duplication Level Percentage of deduplicated Percentage of total 1 74.84198156354972 31.457905020304892 2 12.957918435987366 10.893056514652086 3 4.824756809577046 6.0838878778029475 4 2.2742911548057148 3.823759533980162 5 1.238941916395204 2.603787093647491 6 0.7807699866620355 1.9690596830814933 7 0.5078370666231988 1.494193888471596 8 0.35018138992303827 1.177518037223365 9 0.29121414766063225 1.1016394977341164 >10 1.674217988995982 13.463463919276727 >50 0.15373890637235074 4.4751804326418725 >100 0.09097181516127804 7.0563659786640285 >500 0.006873163606583187 1.924894042397758 >1k 0.005296749931209836 4.738977493799954 >5k 5.044523744009368E-4 1.4508134128618726 >10k+ 5.044523744009368E-4 6.285497573459617 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 70848 1.871558586060312 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 50856 1.34343924250061 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 50304 1.3288573158477013 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20230 0.5344064786020792 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 12361 0.3265347741967524 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 12132 0.32048538795849857 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 10300 0.2720902980524675 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 10120 0.26733532196999715 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 9472 0.25021740807310405 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8537 0.22551794897804994 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7347 0.19408227376616294 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6795 0.17950034711325402 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6188 0.16346551110181248 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5674 0.14988741273298062 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 5576 0.14729859242141344 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 5150 0.13604514902623374 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4781 0.1262974480571696 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 4463 0.11789699031147206 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4444 0.11739507616943354 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 4192 0.1107381096539751 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 4148 0.10957578216714903 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 4084 0.10788512400449293 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3994 0.10550763596325777 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3826 0.10106965828628549 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3793 0.10019791267116593 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 2.6416533791501695E-5 0.0 0.0 0.0 3 0.0 2.6416533791501695E-5 0.0 0.0 0.0 4 0.0 2.6416533791501695E-5 0.0 0.0 0.0 5 0.0 7.924960137450508E-5 0.0 0.0 0.0 6 0.0 7.924960137450508E-5 0.0 0.0 0.0 7 0.0 2.6416533791501695E-4 0.0 0.0 0.0 8 0.0 2.6416533791501695E-4 0.0 0.0 0.0 9 0.0 2.6416533791501695E-4 0.0 5.283306758300339E-5 0.0 10 0.0 2.6416533791501695E-4 0.0 5.283306758300339E-5 0.0 11 2.6416533791501695E-5 2.6416533791501695E-4 0.0 1.3208266895750847E-4 0.0 12 2.6416533791501695E-5 2.6416533791501695E-4 0.0 2.6416533791501695E-4 0.0 13 2.6416533791501695E-5 2.6416533791501695E-4 0.0 3.1699840549802034E-4 0.0 14 2.6416533791501695E-5 2.6416533791501695E-4 0.0 3.698314730810237E-4 0.0 15 2.6416533791501695E-5 2.6416533791501695E-4 0.0 4.754976082470305E-4 0.0 16 5.283306758300339E-5 2.6416533791501695E-4 0.0 7.132464123705458E-4 0.0 17 5.283306758300339E-5 2.9058187170651864E-4 0.0 0.001030244817868566 0.0 18 5.283306758300339E-5 2.9058187170651864E-4 0.0 0.001215160554409078 0.0 19 5.283306758300339E-5 2.9058187170651864E-4 0.0 0.0016114085612816034 0.0 20 5.283306758300339E-5 2.9058187170651864E-4 0.0 0.0033284832577292135 0.0 21 5.283306758300339E-5 2.9058187170651864E-4 0.0 0.006049386238253888 0.0 22 5.283306758300339E-5 2.9058187170651864E-4 0.0 0.010328864712477162 0.0 23 5.283306758300339E-5 2.9058187170651864E-4 0.0 0.01262710315233781 0.0 24 5.283306758300339E-5 2.9058187170651864E-4 0.0 0.016431084018314054 0.0 25 5.283306758300339E-5 3.962480068725254E-4 0.0 0.01946898540433675 0.0 26 5.283306758300339E-5 3.962480068725254E-4 0.0 0.02480512523022009 0.0 27 5.283306758300339E-5 3.962480068725254E-4 0.0 0.06836598945240639 0.0 28 5.283306758300339E-5 3.962480068725254E-4 0.0 0.17881351723467498 0.0 29 5.283306758300339E-5 3.962480068725254E-4 0.0 0.3632009230993568 0.0 30 5.283306758300339E-5 3.962480068725254E-4 0.0 0.607738776407288 0.0 31 5.283306758300339E-5 3.962480068725254E-4 0.0 0.9364132898411521 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 16110 0.0 23.529797 1 GTATTGG 1135 0.0 20.863436 1 ATTGGAC 1100 0.0 19.845455 3 TTGGACC 1705 0.0 19.205278 4 ACGTTTA 280 0.0 19.160715 26 GGACCCT 1665 0.0 18.88889 6 CCGTTTA 145 1.546141E-10 17.862068 27 TGGACCC 1910 0.0 16.659685 5 GACCCTC 1755 0.0 16.655272 7 TATACCG 275 0.0 16.145454 5 CGTTTAC 170 1.4897523E-9 15.235293 28 GGACCGT 370 0.0 15.0 6 TCTACGC 75 0.004106719 14.8 3 TATTGGA 1470 0.0 14.724489 2 CCCTCGC 1955 0.0 14.6675205 9 GTATCAA 25950 0.0 14.614643 2 TTTTTAC 2270 0.0 14.588105 1 ACCCTCG 2035 0.0 14.545455 8 CCGTATA 155 1.2123928E-7 14.32258 2 CTGTGCG 330 0.0 14.015151 9 >>END_MODULE