##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088515_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 888301 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.44332157680786 31.0 31.0 34.0 30.0 34.0 2 31.603594952611783 31.0 31.0 34.0 30.0 34.0 3 31.69601295056518 31.0 31.0 34.0 30.0 34.0 4 35.42770187132515 37.0 35.0 37.0 33.0 37.0 5 35.338082474296435 37.0 35.0 37.0 33.0 37.0 6 35.420032173778935 37.0 35.0 37.0 33.0 37.0 7 35.2560483439735 37.0 35.0 37.0 32.0 37.0 8 35.324701874702384 37.0 35.0 37.0 32.0 37.0 9 36.86190041438657 39.0 37.0 39.0 33.0 39.0 10 36.68831060642733 39.0 35.0 39.0 32.0 39.0 11 36.76812927149694 39.0 37.0 39.0 32.0 39.0 12 36.58739098571318 38.0 35.0 39.0 32.0 39.0 13 36.66905699757177 39.0 35.0 39.0 32.0 39.0 14 37.57513162768026 39.0 36.0 41.0 32.0 41.0 15 37.596536534350406 39.0 36.0 41.0 32.0 41.0 16 37.4692069467444 39.0 36.0 41.0 32.0 41.0 17 37.54017500824608 39.0 36.0 41.0 32.0 41.0 18 37.514160177687515 39.0 36.0 41.0 32.0 41.0 19 37.60155735499566 39.0 37.0 41.0 32.0 41.0 20 37.504254751486265 39.0 36.0 41.0 32.0 41.0 21 37.361932498105936 39.0 36.0 41.0 31.0 41.0 22 37.24472673114181 39.0 36.0 41.0 31.0 41.0 23 37.057365690233375 39.0 36.0 40.0 31.0 41.0 24 37.205852520710884 39.0 36.0 41.0 31.0 41.0 25 37.14319132816466 39.0 36.0 41.0 31.0 41.0 26 36.90010368107207 39.0 36.0 40.0 31.0 41.0 27 36.85780945873077 39.0 35.0 40.0 31.0 41.0 28 36.68056548399698 39.0 35.0 40.0 30.0 41.0 29 36.454109586727924 39.0 35.0 40.0 30.0 41.0 30 36.30015839225668 38.0 35.0 40.0 30.0 41.0 31 35.99109423494964 38.0 35.0 40.0 29.0 41.0 32 35.828556986877196 38.0 35.0 40.0 29.0 41.0 33 35.633757026053104 38.0 34.0 40.0 28.0 41.0 34 35.421801844194704 38.0 34.0 40.0 27.0 41.0 35 35.192435897291574 38.0 34.0 40.0 26.0 41.0 36 35.11242247841666 38.0 34.0 40.0 25.0 41.0 37 34.93634702651466 38.0 34.0 40.0 25.0 41.0 38 34.78948351966282 38.0 33.0 40.0 24.0 41.0 39 34.63493680633029 38.0 33.0 40.0 24.0 41.0 40 34.42332610230091 38.0 33.0 40.0 23.0 41.0 41 34.247375608042766 38.0 33.0 40.0 22.0 41.0 42 33.915623195290785 38.0 33.0 40.0 20.0 41.0 43 33.4891663974261 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 1.0 14 2.0 15 8.0 16 18.0 17 33.0 18 86.0 19 189.0 20 418.0 21 826.0 22 1509.0 23 2482.0 24 4007.0 25 6175.0 26 8944.0 27 12128.0 28 16456.0 29 21161.0 30 26235.0 31 32050.0 32 39109.0 33 47449.0 34 58188.0 35 71088.0 36 94176.0 37 133359.0 38 171060.0 39 141141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.08798819319127 22.45421315522554 15.789580333693195 21.668218317889995 2 18.927255513615318 24.99051560225644 35.01695934148447 21.065269542643765 3 19.853292971639117 24.78191513912514 33.93748290275481 21.427308986480934 4 13.819752538835372 17.180550286445698 35.887497593721044 33.11219958099788 5 11.814126067627978 40.040144050271245 34.53964365682353 13.606086225277242 6 31.462195809753673 38.64196933246726 13.269150884666347 16.62668397311272 7 24.53402619157245 34.96067211451974 21.070560541978452 19.43474115192936 8 27.419872318054356 34.96551281603871 18.663718716966436 18.950896148940505 9 24.279495351237927 14.74455167786595 22.19979488934494 38.77615808155119 10 16.455570803139928 28.99107397154793 32.38654465096854 22.166810574343607 11 32.99275808537872 23.09712586161673 23.403103227397022 20.507012825607536 12 21.252030561712754 28.785400444218794 30.694438033954707 19.268130960113744 13 32.34444180519891 21.410085095029725 26.255739889969732 19.98973320980163 14 19.8975347320334 23.69084353164074 29.163312886060016 27.248308850265847 15 22.05367324814449 31.043869138951774 25.858352067598705 21.044105545305026 16 20.65020753100582 28.925443064907054 27.28962367485796 23.13472572922917 17 21.13675432088898 27.761873509092077 27.78461354878583 23.31675862123312 18 22.40051514070118 25.84281679295644 30.721005605082063 21.035662461260316 19 22.264074902538667 25.244483570321318 32.38147880054171 20.109962726598305 20 22.83246332042855 24.980158752494933 31.81117661693503 20.376201310141496 21 21.776402368116212 25.74116206105813 32.54122195066762 19.94121362015803 22 20.36044088659137 26.328462987208162 31.94468991929537 21.366406206905094 23 21.486635723701763 26.428091378935743 32.437315729690724 19.64795716767177 24 20.932093963645208 26.57477589240584 30.731362454843573 21.761767689105383 25 21.127410641212833 26.67868211338274 31.71109792739173 20.482809318012702 26 20.395226392855577 27.880752132441593 31.670345975069264 20.05367549963357 27 19.597411237857436 27.51612347616405 31.41288819893257 21.473577087045946 28 20.272970535888174 27.410978936193924 31.299075426009875 21.016975101908024 29 20.344342739679455 27.159600180569427 30.53525775609844 21.96079932365268 30 20.4507255986428 27.518937837512286 32.40568230813655 19.624654255708368 31 21.368319972621894 27.1961868780965 31.895720031836056 19.53977311744555 32 20.567577881821588 27.162977414187306 31.08630970808318 21.183134995907917 33 20.215219841022357 27.064249618091164 31.70918416167493 21.011346379211552 34 19.407948431894145 27.45814763239037 32.50835021012022 20.625553725595267 35 18.972060146279247 29.374840284993486 31.36549435382826 20.287605214899003 36 21.37113433397013 27.16590434998947 31.0653708596523 20.397590456388095 37 20.377327054680787 27.978691907360233 30.94919402319709 20.694787014761886 38 20.092963984054954 26.286134992530684 32.43168700699425 21.18921401642011 39 19.45556742590631 26.281069142103856 33.20991420700866 21.053449224981172 40 18.2735356596469 26.762437507106263 33.0729110965765 21.89111573667034 41 19.4899026343548 25.84484313312717 33.17895623217806 21.486298000339975 42 18.67745280034583 27.740822086207267 32.16544842345106 21.416276689995847 43 18.60945783017243 27.632300312619257 31.66032684866954 22.09791500853877 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 371.0 1 309.5 2 248.0 3 502.5 4 757.0 5 757.0 6 1328.0 7 1899.0 8 2154.0 9 2409.0 10 3597.0 11 4785.0 12 4785.0 13 8861.0 14 12937.0 15 22807.5 16 32678.0 17 29237.5 18 25797.0 19 25797.0 20 26329.0 21 26861.0 22 21032.5 23 15204.0 24 16693.0 25 18182.0 26 18182.0 27 19491.5 28 20801.0 29 22297.5 30 23794.0 31 25692.5 32 27591.0 33 27591.0 34 30507.0 35 33423.0 36 36141.0 37 38859.0 38 40823.5 39 42788.0 40 42788.0 41 44451.0 42 46114.0 43 48730.5 44 51347.0 45 55568.0 46 59789.0 47 59789.0 48 77242.5 49 94696.0 50 86937.0 51 79178.0 52 70539.5 53 61901.0 54 61901.0 55 54461.5 56 47022.0 57 39881.0 58 32740.0 59 28999.0 60 25258.0 61 25258.0 62 22115.5 63 18973.0 64 16389.0 65 13805.0 66 11754.0 67 9703.0 68 9703.0 69 8300.5 70 6898.0 71 5729.5 72 4561.0 73 3743.5 74 2926.0 75 2926.0 76 2329.5 77 1733.0 78 1390.0 79 1047.0 80 824.5 81 602.0 82 602.0 83 456.0 84 310.0 85 235.0 86 160.0 87 123.5 88 87.0 89 87.0 90 66.0 91 45.0 92 28.0 93 11.0 94 9.5 95 8.0 96 8.0 97 4.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 888301.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.15048574301957 #Duplication Level Percentage of deduplicated Percentage of total 1 84.92933210590508 48.53752583682703 2 8.608105882582263 9.839148650338412 3 2.4663368175460127 4.228570413859431 4 1.1260806407123047 2.5742422241007565 5 0.6487952350053872 1.8539481414157208 6 0.42796740817626233 1.4675127155672711 7 0.28302451492422537 1.132249195357138 8 0.21134379685600505 0.9662720519275793 9 0.15885312127866852 0.8170679738583635 >10 1.0151153945653657 10.781743205240051 >50 0.07538407923071949 3.0114504482620106 >100 0.040361930917750984 4.4284192993383344 >500 0.005935578063800584 2.420116897020459 >1k 0.0027699364297736058 3.25573171125123 >5k 0.0 0.0 >10k+ 5.935578063800584E-4 4.686001235636213 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 17678 1.9900911965651282 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12494 1.4065052273947682 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11270 1.2687140957851 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4952 0.5574686958587235 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3004 0.33817365960412066 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2568 0.28909119769087277 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2457 0.2765954333047019 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2321 0.26128530757029433 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2037 0.2293141626543255 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1944 0.21884473843888502 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1881 0.21175254784132855 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1599 0.18000655183321868 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1465 0.16492157500667 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1288 0.14499589666115426 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1190 0.13396360017606646 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1057 0.11899119780344725 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1030 0.11595168754735163 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 939 0.10570741223977008 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 926 0.104243944338687 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 899 0.10120443408259136 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.125744539294676E-4 0.0 0.0 0.0 1.125744539294676E-4 7 1.125744539294676E-4 0.0 0.0 0.0 1.125744539294676E-4 8 1.125744539294676E-4 0.0 0.0 0.0 1.125744539294676E-4 9 1.125744539294676E-4 0.0 0.0 2.251489078589352E-4 1.125744539294676E-4 10 1.125744539294676E-4 0.0 0.0 4.502978157178704E-4 1.125744539294676E-4 11 1.125744539294676E-4 0.0 0.0 9.005956314357408E-4 1.125744539294676E-4 12 1.125744539294676E-4 0.0 0.0 0.0011257445392946761 1.125744539294676E-4 13 1.125744539294676E-4 0.0 0.0 0.0011257445392946761 1.125744539294676E-4 14 1.125744539294676E-4 0.0 0.0 0.0012383189932241435 1.125744539294676E-4 15 1.125744539294676E-4 0.0 0.0 0.001688616808942014 1.125744539294676E-4 16 1.125744539294676E-4 0.0 0.0 0.0023640635325188194 1.125744539294676E-4 17 1.125744539294676E-4 0.0 0.0 0.0032646591639545605 1.125744539294676E-4 18 1.125744539294676E-4 0.0 0.0 0.0036023825257429634 1.125744539294676E-4 19 1.125744539294676E-4 0.0 0.0 0.004615552611108172 1.125744539294676E-4 20 1.125744539294676E-4 0.0 0.0 0.010019126399722616 1.125744539294676E-4 21 1.125744539294676E-4 0.0 0.0 0.016661019181561206 1.125744539294676E-4 22 1.125744539294676E-4 0.0 0.0 0.026567571127354354 1.125744539294676E-4 23 1.125744539294676E-4 0.0 0.0 0.032196293823827736 1.125744539294676E-4 24 1.125744539294676E-4 0.0 0.0 0.039963931144960996 1.125744539294676E-4 25 1.125744539294676E-4 0.0 0.0 0.0444669093021397 1.125744539294676E-4 26 1.125744539294676E-4 0.0 0.0 0.05032078090647202 1.125744539294676E-4 27 1.125744539294676E-4 0.0 0.0 0.09490026466254119 1.125744539294676E-4 28 1.125744539294676E-4 0.0 0.0 0.22458603558928786 1.125744539294676E-4 29 1.125744539294676E-4 0.0 0.0 0.42508113803766967 1.125744539294676E-4 30 1.125744539294676E-4 0.0 0.0 0.7127088678274593 1.125744539294676E-4 31 1.125744539294676E-4 0.0 0.0 1.1256319648407465 1.125744539294676E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTTA 45 1.07949745E-7 32.88889 26 GTAGCAC 40 5.9386344E-5 27.75 3 GGTATCA 4000 0.0 23.125 1 TCACGTT 75 9.261885E-6 19.733334 24 GTATTGG 265 0.0 19.54717 1 ATACTGG 140 9.458745E-11 18.5 6 CGAATTA 60 9.234565E-4 18.5 15 TTCTGCG 70 1.2188018E-4 18.5 7 GCCCTAA 120 1.0403892E-7 16.958332 15 TATTGGA 290 0.0 16.586206 2 ATTAGAC 80 3.3814838E-4 16.1875 3 GACCGTG 80 3.3814838E-4 16.1875 7 TCTAATA 160 6.2937033E-10 16.1875 2 TAAGCCG 80 3.3814838E-4 16.1875 36 ACCGGGC 70 0.0025918724 15.857142 8 ATTGGAC 315 0.0 15.857142 3 CCCGAAT 70 0.0025918724 15.857142 13 TAGACTG 95 7.056788E-5 15.578948 5 TGCTCGG 95 7.056788E-5 15.578948 10 TACTCCG 110 1.4510502E-5 15.136364 5 >>END_MODULE