##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088514_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 828147 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.790497339240495 31.0 31.0 34.0 30.0 34.0 2 31.959627940450186 31.0 31.0 34.0 30.0 34.0 3 32.09766140552342 33.0 31.0 34.0 30.0 34.0 4 35.75868535417021 37.0 35.0 37.0 35.0 37.0 5 35.66368651942228 37.0 35.0 37.0 33.0 37.0 6 35.697851951404765 37.0 35.0 37.0 33.0 37.0 7 35.56314036034665 37.0 35.0 37.0 33.0 37.0 8 35.58746333682305 37.0 35.0 37.0 33.0 37.0 9 37.21042640980406 39.0 37.0 39.0 33.0 39.0 10 37.07695614425941 39.0 37.0 39.0 33.0 39.0 11 37.13647214806067 39.0 37.0 39.0 33.0 39.0 12 36.994831835410864 39.0 37.0 39.0 33.0 39.0 13 37.03519061229468 39.0 37.0 39.0 33.0 39.0 14 38.11166254300263 40.0 37.0 41.0 33.0 41.0 15 38.119364074252516 40.0 37.0 41.0 33.0 41.0 16 38.019619705197265 40.0 37.0 41.0 33.0 41.0 17 38.0326343028472 40.0 37.0 41.0 33.0 41.0 18 37.983639378033125 40.0 37.0 41.0 33.0 41.0 19 38.03757303956906 40.0 37.0 41.0 33.0 41.0 20 37.93759199755599 40.0 37.0 41.0 32.0 41.0 21 37.7994727989113 40.0 37.0 41.0 32.0 41.0 22 37.67653447998966 40.0 37.0 41.0 32.0 41.0 23 37.510498739958 39.0 36.0 41.0 32.0 41.0 24 37.67230213959599 40.0 37.0 41.0 32.0 41.0 25 37.63786984677841 40.0 37.0 41.0 32.0 41.0 26 37.435193268827874 39.0 36.0 41.0 32.0 41.0 27 37.41258375626549 39.0 36.0 41.0 32.0 41.0 28 37.2728428648537 39.0 36.0 41.0 31.0 41.0 29 37.0675157912786 39.0 36.0 41.0 31.0 41.0 30 36.95584479567033 39.0 36.0 41.0 31.0 41.0 31 36.73742825850966 39.0 35.0 41.0 30.0 41.0 32 36.593872826925654 39.0 35.0 40.0 30.0 41.0 33 36.43431782038696 39.0 35.0 40.0 30.0 41.0 34 36.26030040560432 38.0 35.0 40.0 30.0 41.0 35 36.08405391796384 38.0 35.0 40.0 29.0 41.0 36 36.04118713223618 38.0 35.0 40.0 29.0 41.0 37 35.92412941180732 38.0 35.0 40.0 28.0 41.0 38 35.808950584859936 38.0 35.0 40.0 27.0 41.0 39 35.70195871022898 38.0 35.0 40.0 27.0 41.0 40 35.5547831484024 38.0 35.0 40.0 26.0 41.0 41 35.45837635105845 38.0 35.0 40.0 25.0 41.0 42 35.21048799307369 38.0 34.0 40.0 24.0 41.0 43 34.86157167749204 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 0.0 14 0.0 15 8.0 16 4.0 17 22.0 18 61.0 19 115.0 20 236.0 21 532.0 22 882.0 23 1496.0 24 2591.0 25 4005.0 26 5989.0 27 8342.0 28 11854.0 29 15349.0 30 19691.0 31 24287.0 32 30157.0 33 37803.0 34 47064.0 35 58981.0 36 78343.0 37 114459.0 38 159500.0 39 206373.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.732865058981076 21.56694403288305 14.37063709703712 23.329553811098755 2 17.85963120074093 23.48085545199101 36.40778750632436 22.2517258409437 3 18.40470351278215 24.89147458120358 33.19326158278663 23.51056032322764 4 13.075697913534675 16.6142001359662 37.276473862732104 33.03362808776703 5 12.20363051487236 38.88971402420102 35.50118517606174 13.405470284864885 6 31.291908320624234 38.801444671054774 14.547900312384154 15.358746695936832 7 25.54860429368216 33.71889290186404 22.19050482583406 18.541997978619737 8 26.397487402598813 35.23070179569569 19.74733954237593 18.624471259329564 9 24.61060657105562 14.886608295387171 22.12348773828801 38.3792973952692 10 15.80878757032266 28.261045442415416 33.86633049446535 22.063836492796568 11 33.09992066625853 23.14673602633349 23.78804729112102 19.965296016286963 12 20.85088758396758 27.528325285245252 31.461081184862106 20.15970594592506 13 30.771107061910506 21.544484252191943 26.590327562618715 21.094081123278837 14 20.257273165271382 22.699351685147683 28.55640363365441 28.48697151592652 15 22.163818742324732 30.34050718048849 25.505737507954507 21.989936569232274 16 21.423008234045405 28.924695736384965 26.587188023382325 23.06510800618731 17 21.310950833608043 27.648352285282684 27.546317260099958 23.494379621009315 18 22.46364473940013 26.494330112890584 29.753896349319625 21.288128798389657 19 22.45277710358185 25.71210183699271 30.919510666584554 20.915610392840883 20 23.163037480060908 25.573962110591474 30.33809215030665 20.92490825904097 21 22.174324123615737 26.09717839948705 30.765552492492276 20.962944984404945 22 21.151196587079347 26.53103857165455 30.54614700047214 21.771617840793965 23 21.94525851086824 26.47766640463589 30.927480266184627 20.649594818311243 24 21.708947807575225 26.599625428818797 29.423399468934864 22.268027294671114 25 21.69047282668415 26.66314072260118 30.38542674187071 21.26095970884396 26 21.213142111243535 27.51794065546334 30.282063450087964 20.986853783205156 27 20.64464400643847 27.432569338535306 29.977407392648892 21.945379262377333 28 21.07705516049687 27.09688014325959 29.991776822230836 21.834287874012706 29 21.147332538788405 27.100864943059626 29.554294104790575 22.197508413361398 30 21.230168074025503 27.258324910915576 30.647216013582128 20.86429100147679 31 21.906135021922438 27.050270060750087 30.477077137271525 20.566517780055957 32 21.289577816498763 27.008973044640626 29.74797952537412 21.953469613486494 33 21.16822254986132 26.70214346003789 30.505695244926322 21.623938745174467 34 20.604071499383565 26.917684903767086 31.015387364803594 21.46285623204576 35 20.214044125016454 28.59951192240025 30.064589982213302 21.121853970369994 36 21.93499463259542 26.767228523438476 29.867644270884274 21.43013257308183 37 20.99796292204162 27.24600825698819 30.078717908777065 21.677310912193125 38 20.825771270076448 26.035353626831952 31.149421539895695 21.98945356319591 39 20.275506643144272 25.906028760594435 31.871515564265763 21.946949031995526 40 19.606543282774677 26.06059069223218 31.853885843938336 22.478980181054816 41 20.4754711422006 25.422901972717405 31.89880540532055 22.202821479761443 42 19.430729085536747 26.9295185516581 31.380177673770476 22.259574689034675 43 19.542544982955924 26.708543290019765 31.027583267221882 22.721328459802425 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 378.0 1 321.5 2 265.0 3 627.0 4 989.0 5 989.0 6 1306.5 7 1624.0 8 1714.0 9 1804.0 10 2626.5 11 3449.0 12 3449.0 13 6009.5 14 8570.0 15 14281.0 16 19992.0 17 18723.0 18 17454.0 19 17454.0 20 17887.0 21 18320.0 22 15528.5 23 12737.0 24 14593.0 25 16449.0 26 16449.0 27 18260.0 28 20071.0 29 22140.5 30 24210.0 31 26649.5 32 29089.0 33 29089.0 34 32152.5 35 35216.0 36 38291.5 37 41367.0 38 43789.5 39 46212.0 40 46212.0 41 47782.5 42 49353.0 43 51040.5 44 52728.0 45 54520.0 46 56312.0 47 56312.0 48 67966.0 49 79620.0 50 73577.5 51 67535.0 52 61145.0 53 54755.0 54 54755.0 55 49735.0 56 44715.0 57 38820.5 58 32926.0 59 29801.5 60 26677.0 61 26677.0 62 23313.0 63 19949.0 64 17513.5 65 15078.0 66 12718.0 67 10358.0 68 10358.0 69 8833.0 70 7308.0 71 6198.0 72 5088.0 73 4196.0 74 3304.0 75 3304.0 76 2573.5 77 1843.0 78 1477.0 79 1111.0 80 865.0 81 619.0 82 619.0 83 472.5 84 326.0 85 247.5 86 169.0 87 132.5 88 96.0 89 96.0 90 70.5 91 45.0 92 32.5 93 20.0 94 14.5 95 9.0 96 9.0 97 7.0 98 5.0 99 3.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 828147.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.11293882648394 #Duplication Level Percentage of deduplicated Percentage of total 1 86.32130284697593 56.20633711697537 2 8.228624598114804 10.715798601663005 3 2.193892362301252 4.285523375352353 4 0.9633029895339875 2.508939545155825 5 0.5478185236119709 1.7835037007980508 6 0.3562904812351179 1.3919472185472452 7 0.24218183292202336 1.1038419610356225 8 0.19030900559616526 0.9913262911609679 9 0.13032064581840544 0.7637004215101543 >10 0.7533997170147277 8.774343299153117 >50 0.04427908243766771 2.0127310960144773 >100 0.02288278604412967 3.136195557960728 >500 0.0033487003823792485 1.4802746093584107 >1k 0.001488311281057444 1.7488317950333367 >5k 3.72077820264361E-4 1.8332631700515702 >10k+ 1.860389101321805E-4 1.2634422402298056 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10430 1.2594382398294022 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7605 0.9183152266445451 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7529 0.9091381119535542 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3192 0.38543881702161575 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1989 0.2401747515839579 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1804 0.21783572240194074 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1612 0.19465143265627963 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1575 0.1901836268198762 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1531 0.18487056041982883 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1522 0.18378379683800097 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1212 0.14635082901948568 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 975 0.11773272136468525 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 964 0.11640445476467343 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 948 0.11447243061920166 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 832 0.10046525556453142 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.622545272759546E-4 0.0 10 0.0 0.0 0.0 6.037575454599244E-4 0.0 11 0.0 0.0 0.0 8.452605636438942E-4 0.0 12 0.0 0.0 0.0 0.0015697696181958033 0.0 13 0.0 0.0 0.0 0.0015697696181958033 0.0 14 0.0 0.0 0.0 0.0016905211272877883 0.0 15 0.0 0.0 0.0 0.001932024145471758 0.0 16 0.0 0.0 0.0 0.0024150301818396977 0.0 17 0.0 0.0 0.0 0.0031395392363916066 0.0 18 0.0 0.0 0.0 0.003864048290943516 0.0 19 0.0 0.0 0.0 0.0044678058364034405 0.0 20 0.0 0.0 0.0 0.006762084509151153 1.2075150909198487E-4 21 0.0 0.0 0.0 0.013644920527394291 1.2075150909198487E-4 22 0.0 0.0 0.0 0.02125226560018934 1.2075150909198487E-4 23 0.0 0.0 0.0 0.02680683501842064 1.2075150909198487E-4 24 0.0 0.0 0.0 0.03332741650938783 1.2075150909198487E-4 25 0.0 0.0 0.0 0.036829210273055385 1.2075150909198487E-4 26 0.0 0.0 0.0 0.042987537236746615 1.2075150909198487E-4 27 0.0 0.0 0.0 0.08271478372800964 1.2075150909198487E-4 28 0.0 0.0 0.0 0.18813085116531245 1.2075150909198487E-4 29 0.0 0.0 0.0 0.3387079830030176 1.2075150909198487E-4 30 0.0 0.0 0.0 0.5623397778413736 1.2075150909198487E-4 31 0.0 0.0 0.0 0.9196434932445569 1.2075150909198487E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTACCG 35 8.867291E-4 26.428572 5 GGTATCA 2280 0.0 24.828947 1 GACGTCG 70 5.09908E-6 21.142859 36 ACGTCGC 75 9.260641E-6 19.733334 37 ATTGGAC 285 0.0 18.82456 3 AGACCGT 60 9.2338456E-4 18.5 6 ATACGAC 50 0.0070332624 18.499998 19 GTATTGG 290 0.0 17.86207 1 TTGGACC 375 0.0 17.759998 4 CTAGACT 105 4.7932554E-7 17.619047 4 CTTAGAC 85 2.721627E-5 17.411764 3 AAGACCG 75 2.0663868E-4 17.266666 5 CTAGAAC 65 0.0015794302 17.076923 3 TCTAGAC 145 2.9740477E-9 16.586208 3 GATACGA 70 0.0025916726 15.857143 18 TAATGCC 70 0.0025916726 15.857143 4 TAGTACT 175 1.3096724E-10 15.857143 4 AGACGTC 95 7.055866E-5 15.578948 35 TATAGTG 95 7.055866E-5 15.578948 5 GGACCCT 410 0.0 15.341464 6 >>END_MODULE