##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088512_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2893254 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.49187454679057 31.0 31.0 34.0 30.0 34.0 2 31.658772440995502 31.0 31.0 34.0 30.0 34.0 3 31.76090657785317 31.0 31.0 34.0 30.0 34.0 4 35.48379437132032 37.0 35.0 37.0 33.0 37.0 5 35.390545731553466 37.0 35.0 37.0 33.0 37.0 6 35.45910072188615 37.0 35.0 37.0 33.0 37.0 7 35.29784526349916 37.0 35.0 37.0 32.0 37.0 8 35.36048027584167 37.0 35.0 37.0 33.0 37.0 9 36.89949033164734 39.0 37.0 39.0 33.0 39.0 10 36.7389340859807 39.0 37.0 39.0 32.0 39.0 11 36.81514308802476 39.0 37.0 39.0 32.0 39.0 12 36.642648035741075 39.0 35.0 39.0 32.0 39.0 13 36.71712127590595 39.0 35.0 39.0 32.0 39.0 14 37.64706175123235 39.0 37.0 41.0 32.0 41.0 15 37.67253549118052 39.0 37.0 41.0 32.0 41.0 16 37.54857886656339 39.0 36.0 41.0 32.0 41.0 17 37.61999084767532 39.0 37.0 41.0 32.0 41.0 18 37.59025927208603 39.0 36.0 41.0 32.0 41.0 19 37.679034402095354 40.0 37.0 41.0 32.0 41.0 20 37.57947764005511 39.0 37.0 41.0 32.0 41.0 21 37.450629982711504 39.0 36.0 41.0 32.0 41.0 22 37.336385260333174 39.0 36.0 41.0 31.0 41.0 23 37.15666166883378 39.0 36.0 41.0 31.0 41.0 24 37.28853913275502 39.0 36.0 41.0 31.0 41.0 25 37.231978595726474 39.0 36.0 41.0 31.0 41.0 26 36.99917221232564 39.0 36.0 41.0 31.0 41.0 27 36.953852651720176 39.0 36.0 41.0 31.0 41.0 28 36.7849103466201 39.0 35.0 40.0 30.0 41.0 29 36.564694631027905 39.0 35.0 40.0 30.0 41.0 30 36.41371410875091 38.0 35.0 40.0 30.0 41.0 31 36.1180964408932 38.0 35.0 40.0 30.0 41.0 32 35.957150322785346 38.0 35.0 40.0 30.0 41.0 33 35.77179051683675 38.0 35.0 40.0 29.0 41.0 34 35.5657028383958 38.0 34.0 40.0 27.0 41.0 35 35.358283095780735 38.0 34.0 40.0 27.0 41.0 36 35.27900557642018 38.0 34.0 40.0 26.0 41.0 37 35.121265537004355 38.0 34.0 40.0 25.0 41.0 38 34.964413425160735 38.0 34.0 40.0 24.0 41.0 39 34.81912510965162 38.0 34.0 40.0 24.0 41.0 40 34.60469837767441 38.0 33.0 40.0 23.0 41.0 41 34.44802184668197 38.0 33.0 40.0 22.0 41.0 42 34.130487333638875 38.0 33.0 40.0 21.0 41.0 43 33.72365682377005 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 7.0 14 9.0 15 19.0 16 37.0 17 100.0 18 251.0 19 536.0 20 1281.0 21 2447.0 22 4611.0 23 7730.0 24 12543.0 25 18835.0 26 27897.0 27 38633.0 28 51959.0 29 67127.0 30 83550.0 31 101636.0 32 122806.0 33 150444.0 34 183237.0 35 226397.0 36 298842.0 37 426092.0 38 554375.0 39 511851.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.567490445014506 22.805014699711812 15.972154536034514 21.65534031923917 2 18.683012276143053 25.067380879798318 35.3409344634104 20.908672380648223 3 19.244352552523907 24.86408037455405 34.56862066033608 21.322946412585967 4 13.672425580332733 17.339784201456215 36.2278251408276 32.759965077383455 5 11.469093276981559 40.12489052119171 34.871082870705436 13.534933331121291 6 30.86901461123012 39.139010954447826 13.567422701221531 16.424551733100515 7 24.025301615412957 35.45129463227217 21.28620577384495 19.237197978469915 8 27.118911785830075 34.99564849819615 19.031685431006057 18.85375428496772 9 24.10877164604283 14.74447110416161 22.858207402461037 38.28854984733452 10 16.142827418539817 29.34602354304185 32.71285549073811 21.798293547680224 11 32.82238614376753 23.360168170509745 23.690591977061125 20.126853708661596 12 20.975102773555314 28.829442558448033 31.041934099114698 19.15352056888196 13 32.08667472679551 21.963470887796234 26.472131378717528 19.477723006690738 14 19.74714283640496 23.973318623252574 29.32138001018922 26.95815853015325 15 21.609751511619788 31.558134888952022 25.8822073692804 20.949906230147786 16 20.357942994289473 29.48914958728131 27.385428310131083 22.76747910829813 17 20.853371325158456 28.099848820739552 27.87332187218958 23.173457981912406 18 22.211012237432318 26.22047701307939 31.032705735479844 20.53580501400845 19 21.816819401269296 25.7109814762202 32.65351054556565 19.81868857694485 20 22.581114551297603 25.2510840735034 32.019795012812565 20.148006362386432 21 21.55047569276669 25.901044291306608 32.939140497170314 19.609339518756393 22 20.040376683139467 26.572502794431465 32.29239465321745 21.094725869211622 23 21.243451145319423 26.55276723025355 32.76891693574087 19.434864688686165 24 20.71950820771353 26.631121913250617 31.090944659542508 21.558425219493348 25 20.602131717436492 26.96078533028901 32.26149518846254 20.175587763811954 26 20.10666882340783 28.07167984559945 31.99197166926927 19.829679661723443 27 19.04575263699627 27.836823175566334 31.79904011192934 21.318384075508064 28 19.892826554460825 27.680701383286777 31.541544572305092 20.884927489947305 29 19.873471185039403 27.279077467792316 30.80078693401962 22.046664413148655 30 20.083338690623084 27.77046190897861 32.789931336826974 19.356268063571328 31 21.082697889642596 27.56363596144687 32.146814624640626 19.206851524269904 32 20.292238427735693 27.552091866113383 31.289544575070146 20.866125131080786 33 19.964130352882947 27.237117791939458 31.984264084660385 20.81448777051721 34 19.20916725596854 27.708248221552616 32.861269698408776 20.22131482407006 35 18.603102250960337 29.681977455142206 31.716883481367347 19.998036812530113 36 21.02501197613483 27.333549007449744 31.475356121515773 20.166082894899652 37 20.072900616399387 28.3904558673383 31.26973988457287 20.26690363168944 38 19.729411935488553 26.590510200625317 32.82134924897711 20.858728614909026 39 19.290286991740096 26.26928019454911 33.57586302481565 20.864569788895132 40 18.00519415163688 26.526741171013672 33.60880171599175 21.859262961357693 41 19.170007196049845 25.76355204209516 33.71919644801321 21.347244313841784 42 18.373464618039065 27.54645807108536 32.861096882610376 21.218980428265198 43 18.175383149906647 27.57801423587421 32.350495324641386 21.896107289577756 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1608.0 1 1403.5 2 1199.0 3 2057.5 4 2916.0 5 2916.0 6 4727.5 7 6539.0 8 7212.5 9 7886.0 10 11856.0 11 15826.0 12 15826.0 13 28508.0 14 41190.0 15 72170.5 16 103151.0 17 93840.0 18 84529.0 19 84529.0 20 87306.5 21 90084.0 22 72126.5 23 54169.0 24 59494.5 25 64820.0 26 64820.0 27 69874.5 28 74929.0 29 78496.5 30 82064.0 31 89194.5 32 96325.0 33 96325.0 34 105457.0 35 114589.0 36 124247.0 37 133905.0 38 140293.0 39 146681.0 40 146681.0 41 151010.5 42 155340.0 43 162193.0 44 169046.0 45 181590.5 46 194135.0 47 194135.0 48 253510.5 49 312886.0 50 283917.0 51 254948.0 52 224290.5 53 193633.0 54 193633.0 55 168257.0 56 142881.0 57 120825.5 58 98770.0 59 86713.5 60 74657.0 61 74657.0 62 65099.5 63 55542.0 64 47892.0 65 40242.0 66 34139.0 67 28036.0 68 28036.0 69 23642.5 70 19249.0 71 16117.0 72 12985.0 73 10514.0 74 8043.0 75 8043.0 76 6332.0 77 4621.0 78 3660.5 79 2700.0 80 2099.5 81 1499.0 82 1499.0 83 1139.5 84 780.0 85 607.0 86 434.0 87 321.5 88 209.0 89 209.0 90 168.5 91 128.0 92 86.0 93 44.0 94 33.0 95 22.0 96 22.0 97 16.5 98 11.0 99 7.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2893254.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.09317317136099 #Duplication Level Percentage of deduplicated Percentage of total 1 76.70276666617437 36.121766733326446 2 12.646686951215862 11.911452372752002 3 4.497258009119297 6.353704506592357 4 2.0961798240497096 3.9486303780914396 5 1.1097004694819554 2.6129658188827163 6 0.6396537044945888 1.8073993605279746 7 0.4202588662726176 1.3853926496323357 8 0.29932307324164253 1.1276858657882112 9 0.20822675781696043 0.8825452888306649 >10 1.1925303277213906 10.360556345272402 >50 0.10614539613098115 3.48724855240016 >100 0.07029773210421358 6.3203851983025165 >500 0.004933818025627562 1.5932215666599865 >1k 0.005154735250643139 4.894833582973022 >5k 5.891126000735016E-4 2.027853186850216 >10k+ 2.945563000367508E-4 5.164358593117526 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 55472 1.9172875938303378 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 40795 1.410004099190738 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 36871 1.2743782606020764 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15781 0.545441222927541 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 9950 0.3439034388270093 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8631 0.29831463120762985 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 7944 0.27456974050670974 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7432 0.2568734027499832 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7425 0.2566314606322155 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6025 0.20824303707866645 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6022 0.2081393475996231 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5046 0.1744057037508632 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4892 0.1690829771599728 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 4658 0.16099519779459392 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3971 0.13725030709367375 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3731 0.12895514877020822 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3433 0.1186553271852385 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3355 0.11595940073011218 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3345 0.11561376913330113 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3326 0.1149570690993601 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3319 0.11471512698159236 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3215 0.11112055837475728 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3157 0.1091158951132531 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3145 0.10870113719707983 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3099 0.10711123185174892 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3044 0.10521025806928808 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 3.4563159681106466E-5 0.0 0.0 0.0 0.0 7 3.4563159681106466E-5 0.0 0.0 0.0 0.0 8 6.912631936221293E-5 0.0 0.0 0.0 0.0 9 6.912631936221293E-5 0.0 0.0 0.0 0.0 10 1.0368947904331939E-4 0.0 0.0 1.0368947904331939E-4 0.0 11 1.0368947904331939E-4 0.0 0.0 2.0737895808663878E-4 0.0 12 1.0368947904331939E-4 0.0 0.0 4.1475791617327757E-4 0.0 13 1.0368947904331939E-4 0.0 0.0 4.49321075854384E-4 0.0 14 1.0368947904331939E-4 0.0 0.0 5.530105548977035E-4 0.0 15 1.0368947904331939E-4 0.0 0.0 8.640789920276616E-4 0.0 16 1.0368947904331939E-4 0.0 0.0 0.0013479632275631521 0.0 17 1.0368947904331939E-4 0.0 0.0 0.0017627211437364297 0.0 18 1.0368947904331939E-4 0.0 0.0 0.0019701001018230684 0.0 19 1.0368947904331939E-4 0.0 0.0 0.0026268001357640913 0.0 20 1.0368947904331939E-4 0.0 0.0 0.004493210758543841 0.0 21 1.0368947904331939E-4 0.0 0.0 0.007465642491118996 0.0 22 1.0368947904331939E-4 0.0 0.0 0.012684679602966072 0.0 23 1.0368947904331939E-4 0.0 0.0 0.015587985016179015 0.0 24 1.0368947904331939E-4 0.0 0.0 0.02011575893440396 0.0 25 1.0368947904331939E-4 0.0 0.0 0.022846248549211374 0.0 26 1.0368947904331939E-4 0.0 0.0 0.028860238333723896 0.0 27 1.0368947904331939E-4 0.0 0.0 0.08336634115082879 0.0 28 1.0368947904331939E-4 0.0 0.0 0.21256343203880476 0.0 29 1.0368947904331939E-4 0.0 0.0 0.39640487838261 0.0 30 1.0368947904331939E-4 0.0 0.0 0.6664468449710949 0.0 31 1.0368947904331939E-4 0.0 0.0 1.0335421639441267 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10900 0.0 25.7133 1 GTATTGG 630 0.0 21.142859 1 ATTGGAC 645 0.0 19.217054 3 TTGGACC 1335 0.0 17.737827 4 GGACCCT 1390 0.0 17.302158 6 GACCCTC 1350 0.0 16.718517 7 TGGACCC 1445 0.0 16.643599 5 TATTGGA 845 0.0 15.982249 2 TATACCG 280 0.0 15.857142 5 CCGTATA 145 5.3543772E-8 15.310345 2 GTATCAA 18370 0.0 15.257214 2 CCTCGCA 1495 0.0 15.09699 10 CCCTCGC 1525 0.0 15.042623 9 TAAGACG 75 0.0041064075 14.8 4 CCCGTAT 125 2.9623207E-6 14.799999 1 TATACTG 465 0.0 14.720429 5 ACCCTCG 1540 0.0 14.655844 8 ACGTTTA 240 5.456968E-12 13.875001 26 TCGCATG 1665 0.0 13.555555 12 CTCGCAT 1665 0.0 13.444445 11 >>END_MODULE