##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088511_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2271053 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.752821268371985 31.0 31.0 34.0 30.0 34.0 2 31.91626087105849 31.0 31.0 34.0 30.0 34.0 3 32.03869306440669 33.0 31.0 34.0 30.0 34.0 4 35.70745156541921 37.0 35.0 37.0 35.0 37.0 5 35.61911368867217 37.0 35.0 37.0 33.0 37.0 6 35.660608096772734 37.0 35.0 37.0 33.0 37.0 7 35.51657314910749 37.0 35.0 37.0 33.0 37.0 8 35.55550883224654 37.0 35.0 37.0 33.0 37.0 9 37.15561283686466 39.0 37.0 39.0 33.0 39.0 10 37.028922266455254 39.0 37.0 39.0 33.0 39.0 11 37.085319893459115 39.0 37.0 39.0 33.0 39.0 12 36.94058130743756 39.0 37.0 39.0 33.0 39.0 13 36.9874357841935 39.0 37.0 39.0 33.0 39.0 14 38.036359785526805 40.0 37.0 41.0 33.0 41.0 15 38.04304611120921 40.0 37.0 41.0 33.0 41.0 16 37.94158040345162 40.0 37.0 41.0 33.0 41.0 17 37.98016558838565 40.0 37.0 41.0 33.0 41.0 18 37.94311933715329 40.0 37.0 41.0 33.0 41.0 19 38.011695455808386 40.0 37.0 41.0 33.0 41.0 20 37.91320810214469 40.0 37.0 41.0 32.0 41.0 21 37.78107644339432 40.0 37.0 41.0 32.0 41.0 22 37.67602429357659 40.0 37.0 41.0 32.0 41.0 23 37.501904623097744 39.0 36.0 41.0 32.0 41.0 24 37.646039084072456 40.0 37.0 41.0 32.0 41.0 25 37.60151084100635 40.0 37.0 41.0 32.0 41.0 26 37.392245799635674 39.0 36.0 41.0 32.0 41.0 27 37.35293848272145 39.0 36.0 41.0 32.0 41.0 28 37.202364718040485 39.0 36.0 41.0 31.0 41.0 29 36.993364311621086 39.0 36.0 41.0 31.0 41.0 30 36.86202523675141 39.0 35.0 41.0 30.0 41.0 31 36.61716965654258 39.0 35.0 40.0 30.0 41.0 32 36.45755647270231 39.0 35.0 40.0 30.0 41.0 33 36.2917981218404 38.0 35.0 40.0 30.0 41.0 34 36.10321996008019 38.0 35.0 40.0 30.0 41.0 35 35.924706292631654 38.0 35.0 40.0 29.0 41.0 36 35.846529341235104 38.0 35.0 40.0 28.0 41.0 37 35.71141976871522 38.0 35.0 40.0 27.0 41.0 38 35.58095121514117 38.0 35.0 40.0 26.0 41.0 39 35.450549590872605 38.0 35.0 40.0 25.0 41.0 40 35.27449909799551 38.0 34.0 40.0 25.0 41.0 41 35.148956453239975 38.0 34.0 40.0 24.0 41.0 42 34.87768625390953 38.0 34.0 40.0 23.0 41.0 43 34.4963261535508 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 2.0 13 3.0 14 8.0 15 8.0 16 24.0 17 54.0 18 149.0 19 327.0 20 687.0 21 1419.0 22 2549.0 23 4680.0 24 7536.0 25 11690.0 26 17616.0 27 24904.0 28 34120.0 29 45016.0 30 56719.0 31 70151.0 32 85949.0 33 106474.0 34 132177.0 35 164664.0 36 217267.0 37 315615.0 38 421328.0 39 549914.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.32283702758148 21.815739218767682 15.239714793093775 22.621708960557065 2 18.040177838209853 23.95298568549479 36.41390139287811 21.592935083417252 3 18.618984233304992 24.73249193215658 33.795732640321475 22.852791194216955 4 13.295022176937307 16.932145573000717 36.6528214004693 33.12001084959268 5 12.003726905536771 39.25800058387012 34.99957949021885 13.73869302037425 6 31.030407480582795 38.77729846022968 14.211821564710291 15.980472494477233 7 24.741914873849264 34.626008287785446 21.71450864422803 18.917568194137257 8 26.48881377933496 35.2986478078671 19.415927325342032 18.796611087455908 9 24.369576579674714 15.118053167407366 22.503481865020323 38.0088883878976 10 16.14000201668565 28.817072961309137 33.09429590590797 21.948629116097244 11 32.73027974248069 23.47237162672998 23.739032070145434 20.058316560643895 12 20.83491666640981 28.419327950514585 31.04758013133115 19.698175251744455 13 31.190069100104665 22.023572325260574 26.38009769036654 20.406260884268224 14 20.007943451782058 23.69909464904606 28.879995314948616 27.412966584223263 15 21.981389249832567 31.0144677380933 25.62357637624485 21.380566635829283 16 20.891410284128114 29.365408909435402 27.00218797183509 22.740992834601396 17 21.05609160156104 28.176709218146822 27.669543599378795 23.097655580913347 18 22.17495584647298 26.54011156939094 30.347860661992478 20.937071922143605 19 22.14360475074778 26.017534597387204 31.679753841059632 20.159106810805383 20 22.743634780870373 25.686586794759965 31.07893122705635 20.490847197313318 21 21.691920003628272 26.32668634329538 31.767950814005662 20.213442839070687 22 20.594807782997577 26.86097594375825 31.250349507475168 21.293866765769007 23 21.48721320022034 26.771766224742443 31.619869725629478 20.121150849407744 24 21.000830892101593 26.929446384562578 30.25534851014045 21.814374213195375 25 21.115359262861766 27.08699444706927 31.169241757017556 20.62840453305141 26 20.530960748163956 27.996000093348766 31.11446540437409 20.35857375411318 27 19.751278371750903 27.808642070440452 30.92627076514727 21.51380879266138 28 20.33602914595124 27.591782314195225 30.806502534286956 21.265686005566582 29 20.368348955308395 27.344716305608014 30.236150367252545 22.05078437183104 30 20.57067800707425 27.714588783264855 31.68688709598587 20.02784611367502 31 21.37810081931157 27.441015247112244 31.155987993234856 20.02489594034133 32 20.643507659222397 27.560519283345652 30.512277784798503 21.283695272633445 33 20.42607548128555 26.988317753922956 31.240838500906847 21.34476826388464 34 19.734281850753813 27.282146211471066 32.01669005522989 20.966881882545234 35 19.392986425239744 28.757409008068063 31.10063921889978 20.74896534779241 36 21.1873522986914 26.853270267140395 31.077037832230246 20.882339601937954 37 20.37151929083117 27.544315346229258 30.991482805553193 21.092682557386375 38 19.972893631280293 26.18419737452186 32.349839479747935 21.493069514449907 39 19.490121983062483 25.993008529523532 33.059290117844014 21.457579369569974 40 18.60771192922402 26.20520084736023 33.08720668341954 22.099880539996207 41 19.31161448015524 25.576990057035214 33.25268058473316 21.858714878076384 42 18.546506840659376 27.122528624387016 32.5238116415601 21.807152893393507 43 18.455932116071267 27.081534424780045 32.057816352150304 22.404717106998383 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1204.0 1 1074.0 2 944.0 3 1911.5 4 2879.0 5 2879.0 6 4013.0 7 5147.0 8 5504.0 9 5861.0 10 8775.0 11 11689.0 12 11689.0 13 20359.0 14 29029.0 15 48750.5 16 68472.0 17 62824.0 18 57176.0 19 57176.0 20 58156.0 21 59136.0 22 48369.5 23 37603.0 24 42248.5 25 46894.0 26 46894.0 27 52284.0 28 57674.0 29 61703.0 30 65732.0 31 71390.0 32 77048.0 33 77048.0 34 85341.0 35 93634.0 36 101515.0 37 109396.0 38 116283.5 39 123171.0 40 123171.0 41 127224.0 42 131277.0 43 136533.5 44 141790.0 45 149595.0 46 157400.0 47 157400.0 48 194157.5 49 230915.0 50 210576.0 51 190237.0 52 170089.0 53 149941.0 54 149941.0 55 132559.0 56 115177.0 57 99625.5 58 84074.0 59 74409.5 60 64745.0 61 64745.0 62 56357.5 63 47970.0 64 41462.5 65 34955.0 66 29657.0 67 24359.0 68 24359.0 69 20673.5 70 16988.0 71 14385.5 72 11783.0 73 9505.0 74 7227.0 75 7227.0 76 5842.0 77 4457.0 78 3411.0 79 2365.0 80 1862.5 81 1360.0 82 1360.0 83 1025.0 84 690.0 85 513.0 86 336.0 87 253.5 88 171.0 89 171.0 90 132.0 91 93.0 92 64.5 93 36.0 94 22.5 95 9.0 96 9.0 97 8.0 98 7.0 99 4.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2271053.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.899880980233206 #Duplication Level Percentage of deduplicated Percentage of total 1 78.6781039640202 40.83384231483062 2 11.992226210153438 12.447902259899928 3 3.975569941388115 6.189948203599075 4 1.7530553486173137 3.639334557799992 5 0.9230829273356614 2.3953947031803042 6 0.5621935484049658 1.7506666950043621 7 0.3708985431244307 1.347471317072989 8 0.26995310896545077 1.1208427380440655 9 0.19519839852380813 0.9117696285825992 >10 1.1269743845383047 10.993212295796154 >50 0.09430547966454167 3.3832025409076727 >100 0.05034855243719608 4.913265235707509 >500 0.0037467587827908805 1.3883740364822523 >1k 0.0038319123914906583 3.916438973897306 >5k 1.7030721739958482E-4 0.49776402269296716 >10k+ 3.4061443479916964E-4 4.270570476502185 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 35562 1.5658815536229231 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25659 1.1298283219281982 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 24895 1.0961875394365521 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10515 0.4630010836382947 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6193 0.27269288739628705 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5070 0.22324445972859286 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4959 0.2183568591309846 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4902 0.21584701017545604 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4655 0.20497099803483232 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3540 0.15587482986966839 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3442 0.1515596509636719 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3125 0.13760136817590785 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3047 0.1341668380262372 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2652 0.11677402508880241 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2447 0.10774737533646288 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 2400 0.1056778507590972 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.2016218908145252E-4 0.0 10 0.0 0.0 0.0 3.0822706471403356E-4 0.0 11 0.0 0.0 0.0 3.9629194034661454E-4 0.0 12 0.0 0.0 0.0 5.724216916117766E-4 0.0 13 0.0 0.0 0.0 7.925838806932291E-4 0.0 14 0.0 0.0 0.0 0.001056778507590972 0.0 15 0.0 0.0 0.0 0.0013209731344887151 0.0 16 0.0 0.0 0.0 0.0017612975126516201 0.0 17 0.0 0.0 0.0 0.002509848955528559 0.0 18 0.0 0.0 0.0 0.0028180760202425924 0.0 19 0.0 0.0 0.0 0.0033464652740380785 0.0 20 4.4032437816290506E-5 0.0 0.0 0.0061205088564643805 0.0 21 4.4032437816290506E-5 0.0 0.0 0.010655849951542302 0.0 22 4.4032437816290506E-5 0.0 0.0 0.016952488559271846 0.0 23 4.4032437816290506E-5 0.0 0.0 0.021135570151819442 0.0 24 4.4032437816290506E-5 0.0 0.0 0.027344143883916403 0.0 25 4.4032437816290506E-5 0.0 0.0 0.030778674033587063 0.0 26 4.4032437816290506E-5 0.0 0.0 0.03883661015396823 0.0 27 4.4032437816290506E-5 0.0 0.0 0.09268828160329151 0.0 28 4.4032437816290506E-5 0.0 0.0 0.23363611505323742 0.0 29 4.4032437816290506E-5 0.0 0.0 0.4460926275168391 0.0 30 4.4032437816290506E-5 0.0 0.0 0.7586789035746854 0.0 31 4.4032437816290506E-5 0.0 0.0 1.24862783915655 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7560 0.0 25.0582 1 GTATTGG 570 0.0 18.175438 1 GTATTAG 295 0.0 16.932203 1 TATACCG 225 0.0 16.444445 5 TCTATAC 285 0.0 15.578947 3 GGACCCT 715 0.0 15.524476 6 TACACCG 195 4.1836756E-11 15.179487 5 GTATCAA 12850 0.0 14.814397 2 ATTGGAC 525 0.0 14.800001 3 ACCGCCC 205 9.276846E-11 14.439025 8 CGTATAC 180 3.3360266E-9 14.388888 3 TTGGACC 825 0.0 14.351516 4 ACACCGC 195 6.730261E-10 14.23077 6 TAGACGT 130 4.448275E-6 14.230768 16 CCCGTAT 130 4.448275E-6 14.230768 1 GACCCTC 745 0.0 14.154362 7 TGGACCC 800 0.0 14.106251 5 AGAACCG 105 1.6567545E-4 14.095238 5 CTAACGC 145 8.920215E-7 14.034484 3 TATACTG 320 0.0 13.875 5 >>END_MODULE