##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088505_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 936212 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.779032954074506 31.0 31.0 31.0 28.0 34.0 2 30.898388399208727 31.0 31.0 33.0 28.0 34.0 3 30.85390381665691 31.0 31.0 34.0 27.0 34.0 4 34.64945760148343 35.0 35.0 37.0 32.0 37.0 5 34.43415914344187 35.0 35.0 37.0 30.0 37.0 6 34.71853704075573 35.0 35.0 37.0 32.0 37.0 7 34.56430915220057 35.0 35.0 37.0 30.0 37.0 8 34.72620303948251 35.0 35.0 37.0 32.0 37.0 9 36.14074162689647 38.0 35.0 39.0 32.0 39.0 10 35.84290203500917 37.0 35.0 39.0 30.0 39.0 11 36.05848568486625 37.0 35.0 39.0 31.0 39.0 12 35.76983845539258 37.0 35.0 39.0 30.0 39.0 13 35.94357581402503 37.0 35.0 39.0 30.0 39.0 14 36.61296373043712 38.0 36.0 40.0 31.0 41.0 15 36.70255882214712 38.0 36.0 40.0 31.0 41.0 16 36.47638889482297 38.0 35.0 40.0 30.0 41.0 17 36.60293074645486 38.0 36.0 40.0 31.0 41.0 18 36.59783361033612 38.0 36.0 40.0 30.0 41.0 19 36.68773525654446 38.0 35.0 40.0 30.0 41.0 20 36.590672839057824 38.0 35.0 40.0 30.0 41.0 21 36.44294775115038 38.0 35.0 40.0 30.0 41.0 22 36.28159861228013 38.0 35.0 40.0 30.0 41.0 23 36.09216181804976 38.0 34.0 40.0 29.0 41.0 24 36.19491098170072 38.0 35.0 40.0 30.0 41.0 25 36.1011960966106 38.0 34.0 40.0 29.0 41.0 26 35.776370095662095 38.0 34.0 40.0 28.0 41.0 27 35.68633493268619 38.0 34.0 40.0 27.0 41.0 28 35.49685648122434 38.0 34.0 40.0 27.0 41.0 29 35.2725226764878 38.0 34.0 40.0 27.0 41.0 30 35.09261684319364 37.0 33.0 40.0 27.0 41.0 31 34.75703900398628 37.0 33.0 40.0 25.0 41.0 32 34.55768244799255 37.0 33.0 40.0 25.0 41.0 33 34.32219411842617 36.0 33.0 39.0 25.0 40.0 34 34.05454106548517 36.0 33.0 39.0 24.0 40.0 35 33.7892144087023 36.0 33.0 39.0 23.0 40.0 36 33.692304734397766 36.0 32.0 39.0 22.0 40.0 37 33.48200407599988 36.0 32.0 39.0 21.0 40.0 38 33.27612869734633 36.0 31.0 39.0 20.0 40.0 39 33.037251178151955 36.0 31.0 39.0 18.0 40.0 40 32.7997803916207 36.0 31.0 39.0 18.0 40.0 41 32.58373103527833 36.0 31.0 39.0 15.0 40.0 42 32.22506227222039 35.0 30.0 39.0 15.0 40.0 43 31.78126535442827 35.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 0.0 13 2.0 14 16.0 15 25.0 16 49.0 17 101.0 18 228.0 19 474.0 20 989.0 21 1707.0 22 2905.0 23 4735.0 24 7176.0 25 10147.0 26 13886.0 27 19144.0 28 24308.0 29 30331.0 30 37382.0 31 44559.0 32 53656.0 33 64248.0 34 77392.0 35 94639.0 36 121922.0 37 145047.0 38 130078.0 39 51064.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.14711625144732 25.736264863086568 16.317778451889104 18.79884043357701 2 23.629049830593924 26.803010429261747 30.305422276151127 19.2625174639932 3 24.153076439951633 25.06782651792543 32.479822946084866 18.299274096038076 4 18.516532580227555 19.71412457862108 31.806257557049044 29.96308528410232 5 11.586585089701904 42.32962192323961 33.197715901953835 12.886077085104656 6 31.763852631668893 38.83073491901407 12.57994984042076 16.825462608896274 7 23.532917757943714 36.15260218839323 21.03391112269443 19.280568930968627 8 28.089043934493468 36.036389193900526 18.171204812585184 17.70336205902082 9 24.43185945063725 14.298791299406544 22.142954800835707 39.1263944491205 10 16.98749855801891 30.662499519339637 31.48079708442105 20.869204838220405 11 33.750582133106604 23.108548063900056 22.44181873336381 20.69905106962953 12 19.9080977385464 30.34216609058632 31.070313134204646 18.679423036662637 13 33.30794734525941 21.61615104271255 26.37212511696069 18.703776495067356 14 19.486077939611967 24.349292681572123 29.78545457652754 26.379174802288368 15 22.498750283055546 31.595407877702915 26.240744617672068 19.665097221569475 16 19.995257484415923 29.010950511209 28.58583312326695 22.407958881108126 17 20.82509089821536 28.515122643162016 28.712407018923063 21.947379439699553 18 21.720294121416945 25.86347963922701 31.185992061627065 21.230234177728978 19 22.07790543167573 25.398093594185934 33.53567354402635 18.988327430111983 20 22.409561082318962 25.091966349502037 33.15563141681585 19.342841151363153 21 21.230981871627367 25.5441075312002 34.08405361178878 19.140856985383653 22 19.77426053073449 26.14824420109975 33.70892490162485 20.36857036654091 23 20.81601175802062 26.227820194571315 34.179117550298436 18.77705049710963 24 20.536481053436614 26.39188559856101 32.553844642025524 20.51778870597685 25 20.624495306618588 26.68626336769877 33.11354693167787 19.575694394004778 26 19.809936211029125 28.000388800827164 32.97073739708527 19.218937591058435 27 19.318060439302208 27.35363357871935 32.85879693915481 20.469509042823635 28 19.59492080853482 27.93598031215152 32.924594002213176 19.544504877100486 29 19.766569964922475 26.77769565013053 32.084399687250325 21.371334697696675 30 20.144582637265916 27.339854648306154 33.688096285883965 18.827466428543964 31 20.844317312745403 27.3010813790039 32.92673027049429 18.927871037756404 32 20.17577215417021 27.299479177793064 32.51998478976984 20.00476387826689 33 19.886735055735237 27.280252763263025 32.91476716812004 19.918245012881698 34 19.087770718597923 27.353954018961517 33.76553601107442 19.792739251366143 35 18.671625657436564 28.886940137490225 33.02414410411318 19.417290100960038 36 21.171059546342068 26.895617659248117 32.12808637359914 19.805236420810672 37 20.082310416871394 28.083382823548515 32.12509559800558 19.709211161574515 38 20.125676662978044 26.139592314561234 33.29331390753376 20.44141711492696 39 19.180057508342127 26.296608033223244 34.08373317154661 20.439601286888013 40 18.456396628114145 26.315193567268953 33.56558129996197 21.66282850465493 41 19.431282658201347 25.630412769757278 33.73958035145886 21.19872422058252 42 19.079866525957794 27.08841587161882 32.63598415743443 21.195733444988957 43 19.195865893622386 26.894015458037284 32.116764151709226 21.793354496631103 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 708.0 1 505.0 2 302.0 3 452.5 4 603.0 5 603.0 6 1219.0 7 1835.0 8 2071.5 9 2308.0 10 3744.5 11 5181.0 12 5181.0 13 10248.5 14 15316.0 15 27317.0 16 39318.0 17 34407.5 18 29497.0 19 29497.0 20 32636.5 21 35776.0 22 27781.0 23 19786.0 24 20889.5 25 21993.0 26 21993.0 27 22951.0 28 23909.0 29 24940.5 30 25972.0 31 28022.0 32 30072.0 33 30072.0 34 32879.0 35 35686.0 36 38014.5 37 40343.0 38 42127.5 39 43912.0 40 43912.0 41 45620.0 42 47328.0 43 49623.5 44 51919.0 45 55641.5 46 59364.0 47 59364.0 48 77769.5 49 96175.0 50 87677.0 51 79179.0 52 69743.0 53 60307.0 54 60307.0 55 53085.0 56 45863.0 57 40009.5 58 34156.0 59 30142.5 60 26129.0 61 26129.0 62 22784.5 63 19440.0 64 16687.5 65 13935.0 66 11968.0 67 10001.0 68 10001.0 69 8506.5 70 7012.0 71 6086.5 72 5161.0 73 4253.5 74 3346.0 75 3346.0 76 2641.5 77 1937.0 78 1527.0 79 1117.0 80 871.5 81 626.0 82 626.0 83 480.5 84 335.0 85 263.0 86 191.0 87 141.5 88 92.0 89 92.0 90 70.5 91 49.0 92 36.5 93 24.0 94 14.5 95 5.0 96 5.0 97 3.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 936212.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.91263322227575 #Duplication Level Percentage of deduplicated Percentage of total 1 84.44777604203247 46.37249752233014 2 8.698294229672552 9.552924813868929 3 2.5102835670035626 4.135388423963182 4 1.166667333320043 2.562591014680562 5 0.6705726509694121 1.8411455015786231 6 0.4408142235342986 1.452376186566073 7 0.33396129333659463 1.2837085808000483 8 0.24743311252345557 1.086976300403728 9 0.19405832105331675 0.9590628066958272 >10 1.1527651220499178 11.771683607478343 >50 0.08371382374952788 3.139719630962665 >100 0.04429412268836273 4.54402076670518 >500 0.004878207326310857 1.8979494357092377 >1k 0.0037074375679962512 3.506700795035072 >5k 1.9512829305243427E-4 0.6719381759912285 >10k+ 5.853848791573028E-4 5.221316437231155 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 20242 2.162117127317317 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17532 1.872652775226124 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10955 1.170140950981188 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6271 0.669826919543864 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3481 0.3718174943282077 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3256 0.34778447616565483 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2216 0.23669852554763235 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2123 0.22676487804044382 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2088 0.22302640854849118 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2047 0.21864705857220376 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1959 0.20924747813529415 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1616 0.1726104771141579 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1559 0.16652211251297783 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1469 0.15690890524795664 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1459 0.15584077110739877 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 1453 0.155199890623064 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 1325 0.1415277736239228 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1297 0.13853699803036065 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1139 0.1216604786095457 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1108 0.11834926277381617 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1079 0.11525167376619826 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1043 0.11140639086018979 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1010 0.10788154819634868 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 964 0.10296813114978232 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 1.0681341405579079E-4 0.0 9 0.0 0.0 0.0 1.0681341405579079E-4 0.0 10 0.0 0.0 0.0 1.0681341405579079E-4 0.0 11 0.0 0.0 0.0 2.1362682811158158E-4 0.0 12 0.0 0.0 0.0 2.1362682811158158E-4 0.0 13 0.0 0.0 0.0 3.204402421673723E-4 0.0 14 0.0 0.0 0.0 4.2725365622316315E-4 0.0 15 0.0 0.0 0.0 5.340670702789539E-4 0.0 16 0.0 0.0 0.0 9.61320726502117E-4 0.0 17 0.0 0.0 0.0 0.0013885743827252801 0.0 18 0.0 0.0 0.0 0.0016022012108368618 0.0 19 0.0 0.0 0.0 0.0022430816951716065 0.0 20 0.0 0.0 0.0 0.004272536562231631 0.0 21 0.0 0.0 0.0 0.0077973792260727275 0.0 22 0.0 0.0 0.0 0.012817609686694894 0.0 23 0.0 0.0 0.0 0.015274318209978082 0.0 24 0.0 0.0 0.0 0.021149055983046575 0.0 25 0.0 0.0 0.0 0.02563521937338979 0.0 26 0.0 0.0 0.0 0.03172358397456986 0.0 27 0.0 0.0 0.0 0.07701247153422515 0.0 28 0.0 0.0 0.0 0.19205051847231183 0.0 29 0.0 0.0 0.0 0.35430009442305804 0.0 30 0.0 0.0 0.0 0.5715585786125364 0.0 31 0.0 0.0 0.0 0.8783267037807676 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 25 0.0054958295 29.599998 14 GGTATCA 4675 0.0 26.394651 1 GCCGATA 50 2.7015837E-4 22.199999 2 CGTTTAT 100 5.347829E-10 22.199999 1 CCGTATA 65 6.90038E-5 19.923079 2 TATACCG 65 6.90038E-5 19.923079 5 CGAGTTC 75 9.2627615E-6 19.733334 14 CGTATAC 75 9.2627615E-6 19.733334 3 CGTTCGC 130 6.9667294E-10 18.500002 23 AGCCGTC 90 2.1513479E-6 18.5 12 TATTACC 90 2.1513479E-6 18.5 2 CTCGTTT 50 0.007033932 18.499998 9 TTCGTTA 100 2.873512E-7 18.499998 30 CGTGTCT 100 2.873512E-7 18.499998 35 GTATCAA 6975 0.0 17.744087 2 GTATACT 75 2.0667506E-4 17.266666 4 TGTATAC 65 0.0015796375 17.076925 3 CCGAGTT 65 0.0015796375 17.076925 13 GATAGAC 65 0.0015796375 17.076925 3 ACGTTCG 110 7.803792E-7 16.818182 22 >>END_MODULE