##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088502_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1227910 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.852042087775164 31.0 31.0 31.0 28.0 34.0 2 30.981394401869842 31.0 31.0 33.0 28.0 34.0 3 30.942414346328313 31.0 31.0 34.0 27.0 34.0 4 34.743524362534714 35.0 35.0 37.0 32.0 37.0 5 34.57482551652809 35.0 35.0 37.0 32.0 37.0 6 34.814037673770876 35.0 35.0 37.0 32.0 37.0 7 34.646926077644125 35.0 35.0 37.0 31.0 37.0 8 34.81127036997825 35.0 35.0 37.0 32.0 37.0 9 36.227453966495915 38.0 35.0 39.0 32.0 39.0 10 35.95303238836723 37.0 35.0 39.0 30.0 39.0 11 36.15157136923716 38.0 35.0 39.0 32.0 39.0 12 35.874203321090306 37.0 35.0 39.0 30.0 39.0 13 36.03740013518906 37.0 35.0 39.0 31.0 39.0 14 36.696059157430106 38.0 36.0 40.0 31.0 41.0 15 36.792444071633916 38.0 36.0 40.0 31.0 41.0 16 36.57844304550008 38.0 35.0 40.0 30.0 41.0 17 36.73634549763419 38.0 36.0 40.0 31.0 41.0 18 36.73170264921696 38.0 36.0 40.0 31.0 41.0 19 36.841517700808694 39.0 36.0 40.0 31.0 41.0 20 36.74828529778241 39.0 36.0 40.0 30.0 41.0 21 36.60881009194485 38.0 35.0 40.0 30.0 41.0 22 36.46182619247339 38.0 35.0 40.0 30.0 41.0 23 36.26465294687721 38.0 35.0 40.0 30.0 41.0 24 36.357601941510374 38.0 35.0 40.0 30.0 41.0 25 36.26080820255556 38.0 35.0 40.0 30.0 41.0 26 35.95370996245653 38.0 34.0 40.0 29.0 41.0 27 35.86243128568054 38.0 34.0 40.0 29.0 41.0 28 35.6672980918797 38.0 34.0 40.0 27.0 41.0 29 35.427369269734754 38.0 34.0 40.0 27.0 41.0 30 35.228223566873794 37.0 34.0 40.0 27.0 41.0 31 34.86837797558453 37.0 33.0 40.0 26.0 41.0 32 34.65256981374856 37.0 33.0 40.0 25.0 41.0 33 34.40834263097458 36.0 33.0 40.0 25.0 41.0 34 34.14427848946584 36.0 33.0 39.0 24.0 40.0 35 33.872224348690054 36.0 33.0 39.0 24.0 40.0 36 33.74743507260304 36.0 33.0 39.0 22.0 40.0 37 33.526927054914445 36.0 32.0 39.0 21.0 40.0 38 33.31724312042414 36.0 32.0 39.0 20.0 40.0 39 33.06756358365027 36.0 31.0 39.0 18.0 40.0 40 32.80120937202238 36.0 31.0 39.0 17.0 40.0 41 32.56765642433077 36.0 31.0 39.0 15.0 40.0 42 32.18277153863068 35.0 30.0 39.0 14.0 40.0 43 31.708093427042698 35.0 30.0 39.0 12.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 4.0 12 0.0 13 2.0 14 9.0 15 16.0 16 49.0 17 102.0 18 293.0 19 478.0 20 1217.0 21 2041.0 22 3686.0 23 5762.0 24 8797.0 25 12999.0 26 17987.0 27 24183.0 28 31129.0 29 39379.0 30 47709.0 31 56894.0 32 68215.0 33 82003.0 34 98328.0 35 121669.0 36 158883.0 37 195413.0 38 180224.0 39 70439.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.03966903111792 25.274409362249678 17.07918332776832 18.606738278864086 2 22.711273627545992 27.094575335325878 30.928406805059 19.265744232069125 3 23.50807469602821 24.843270272251225 33.551726103704674 18.096928928015895 4 17.313483887255583 19.443770308898863 32.35921199436441 30.88353380948115 5 11.076056062740754 42.56427588341165 33.28688584668257 13.072782207165021 6 31.316220244154703 39.09773517603082 12.33925939197498 17.2467851878395 7 22.939303369139434 36.74349097246541 20.587258023796533 19.729947634598627 8 28.50103020579684 35.61954866399003 17.844304550007735 18.03511658020539 9 24.22661269962782 14.206741536431824 22.41491640266795 39.15172936127241 10 16.886823952895572 31.03378912135254 31.146989600214997 20.93239732553689 11 33.57680937527995 23.063009503953875 22.464431432271095 20.895749688495087 12 19.981757620672525 30.69076723864127 31.052601575034 18.274873565652207 13 33.63788877034962 21.549380654933994 26.48581736446482 18.326913210251565 14 19.160199037388733 24.672166526862718 30.51901197970535 25.648622456043196 15 22.05120896482641 32.020262071324446 26.578413727390444 19.3501152364587 16 19.412741976203467 29.10457606827862 28.89690612504174 22.585775830476177 17 20.527155899047976 28.45933333876261 29.062797762050963 21.950713000138446 18 21.419729458999438 25.38850567223982 32.151216294353816 21.04054857440692 19 21.827658378871416 25.01258235538435 34.652539681247 18.507219584497236 20 22.014642766978035 24.729906915001916 34.154376135058754 19.10107418296129 21 20.951209779218345 25.196146297367072 35.19354024317743 18.659103680237152 22 19.08902118233421 26.006792028731745 34.74220423320927 20.161982555724766 23 20.36126426203875 26.05451539607952 35.2275818260296 18.35663851585214 24 19.957733058611787 26.046452915930317 33.5667109152951 20.429103110162796 25 20.005945061120116 26.451205707258673 34.28997239211343 19.25287683950778 26 19.2492120758036 27.917844141671623 34.03254310169312 18.800400680831657 27 18.56153952651253 27.35322621364758 33.89450366883566 20.19073059100423 28 19.038773199990228 27.848213631292197 33.759558925328406 19.353454243389173 29 19.07542083703203 26.664413515648537 33.025628914171236 21.234536733148197 30 19.439128274873564 27.39394581036069 34.699204339080225 18.467721575685513 31 20.242525918023308 27.355750828643792 33.9353047047422 18.466418548590692 32 19.474391445627123 27.216408368691518 33.58242867962636 19.726771506055005 33 19.134464252266046 27.140181283644566 34.071633914537706 19.653720549551675 34 18.389377071609484 27.535975763696037 34.69798275117883 19.37666441351565 35 17.75936347126418 29.414533638458845 33.75125212759893 19.074850762678047 36 20.583756138479202 27.060533752473713 33.01406454870471 19.34164556034237 37 19.391404907525796 28.409411113192334 32.836934303002664 19.362249676279205 38 19.40231775944491 26.20004723473219 34.25381339023218 20.143821615590717 39 18.470246190681728 26.307791287635084 34.933586337760914 20.288376183922274 40 17.591028658452167 26.47246133674292 34.52313280289272 21.413377201912194 41 18.641431375263657 25.73388929156046 34.745706118526606 20.87897321464928 42 18.398009626112664 27.241735957847073 33.410103346336456 20.950151069703807 43 18.396462281437564 27.174385744883583 32.84361231686361 21.58553965681524 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 586.0 1 486.5 2 387.0 3 640.5 4 894.0 5 894.0 6 1712.0 7 2530.0 8 2963.5 9 3397.0 10 5352.0 11 7307.0 12 7307.0 13 14726.5 14 22146.0 15 40348.5 16 58551.0 17 51309.0 18 44067.0 19 44067.0 20 47762.5 21 51458.0 22 39367.0 23 27276.0 24 28356.0 25 29436.0 26 29436.0 27 30721.5 28 32007.0 29 33030.5 30 34054.0 31 36448.5 32 38843.0 33 38843.0 34 41994.5 35 45146.0 36 48677.5 37 52209.0 38 54488.0 39 56767.0 40 56767.0 41 58834.0 42 60901.0 43 62711.0 44 64521.0 45 69921.5 46 75322.0 47 75322.0 48 102954.5 49 130587.0 50 118328.0 51 106069.0 52 91797.0 53 77525.0 54 77525.0 55 67438.5 56 57352.0 57 49672.0 58 41992.0 59 37005.0 60 32018.0 61 32018.0 62 27912.5 63 23807.0 64 20366.0 65 16925.0 66 14338.0 67 11751.0 68 11751.0 69 9896.5 70 8042.0 71 6744.0 72 5446.0 73 4559.0 74 3672.0 75 3672.0 76 2919.0 77 2166.0 78 1704.5 79 1243.0 80 966.0 81 689.0 82 689.0 83 544.0 84 399.0 85 307.0 86 215.0 87 161.0 88 107.0 89 107.0 90 80.0 91 53.0 92 42.5 93 32.0 94 21.0 95 10.0 96 10.0 97 6.0 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1227910.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.821811849800426 #Duplication Level Percentage of deduplicated Percentage of total 1 83.7623877900588 44.24481087936507 2 9.412211272950207 9.943401059006929 3 2.7201005310072106 4.310419153842155 4 1.184848668512408 2.503434137545959 5 0.6409130022107475 1.692709300743342 6 0.4225928958184019 1.3393273459189166 7 0.27649933399468535 1.0223637057803678 8 0.20250424302530012 0.8557312819094932 9 0.1593009671996158 0.7573109145218402 >10 1.0589449819175887 10.565439218709525 >50 0.09521347459768191 3.478259163629391 >100 0.053322350169980666 5.184723026939653 >500 0.005890257839196396 2.1916940412343417 >1k 0.0044951967720183025 4.620750643195609 >5k 3.1001357048402085E-4 1.1879590871289998 >10k+ 4.650203557260313E-4 6.1016670405284525 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 31814 2.5909064996620277 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25182 2.050801768859281 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 17526 1.4273033039880774 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9111 0.741992491306366 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5398 0.4396087661147804 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4888 0.398074777467404 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3376 0.2749387170069467 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3189 0.2597095878362421 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3173 0.25840656074142243 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3090 0.25164710768704546 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2924 0.23812820157829157 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2426 0.19757148325202986 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2419 0.19700140889804627 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2241 0.18250523246817765 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 2231 0.18169084053391538 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 2152 0.17525714425324332 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2000 0.1628783868524566 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 1778 0.14479888591183393 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1751 0.14260002768932575 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1488 0.12118151981822772 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 1469 0.11963417514312938 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1412 0.11499214111783437 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1394 0.11352623563616226 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1350 0.10994291112540822 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1336 0.10880276241744102 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1240 0.10098459984852311 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 1235 0.10057740388139196 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 8.143919342622831E-5 0.0 0.0 0.0 0.0 10 8.143919342622831E-5 0.0 0.0 1.6287838685245663E-4 0.0 11 8.143919342622831E-5 0.0 0.0 1.6287838685245663E-4 0.0 12 8.143919342622831E-5 0.0 0.0 3.2575677370491325E-4 0.0 13 8.143919342622831E-5 0.0 0.0 4.886351605573699E-4 0.0 14 2.4431758027868494E-4 0.0 0.0 4.886351605573699E-4 0.0 15 2.4431758027868494E-4 0.0 0.0 8.14391934262283E-4 0.0 16 3.2575677370491325E-4 0.0 0.0 9.772703211147398E-4 0.0 17 3.2575677370491325E-4 0.0 0.0 0.001303027094819653 0.0 18 3.2575677370491325E-4 0.0 0.0 0.0017102230619507944 0.0 19 3.2575677370491325E-4 0.0 0.0 0.0020359798356557077 0.0 20 3.2575677370491325E-4 0.0 0.0 0.003909081284458959 0.0 21 3.2575677370491325E-4 0.0 0.0 0.006433696280672036 0.0 22 3.2575677370491325E-4 0.0 0.0 0.011727243853376876 0.0 23 3.2575677370491325E-4 0.0 0.0 0.014170419656163726 0.0 24 3.2575677370491325E-4 0.0 0.0 0.017102230619507944 0.0 25 3.2575677370491325E-4 0.0 0.0 0.019952602389425936 0.0 26 3.2575677370491325E-4 0.0 0.0 0.02557190673583569 0.0 27 3.2575677370491325E-4 0.0 0.0 0.07085209828081862 0.0 28 3.2575677370491325E-4 0.0 0.0 0.17818895521658754 0.0 29 3.2575677370491325E-4 0.0 0.0 0.3475824775431424 0.0 30 3.2575677370491325E-4 0.0 0.0 0.5824531113843848 0.0 31 3.2575677370491325E-4 0.0 0.0 0.8656171869273807 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6720 0.0 26.456102 1 TAGACTG 105 4.0017767E-11 22.904764 5 ACGGTGT 95 1.6763443E-7 19.473684 29 TCGAACG 50 0.0070351497 18.5 26 GATAGAC 95 3.6067922E-6 17.526316 3 TATGCGG 85 2.72336E-5 17.411764 5 GTATCAA 10270 0.0 17.3111 2 GACCCTC 345 0.0 17.15942 7 ATAGACA 165 5.4569682E-11 16.818182 4 CGGTGTG 110 7.808667E-7 16.818182 30 GGACCCT 365 0.0 16.726027 6 ACCGTGA 135 2.2195309E-8 16.444445 8 GAACTAG 80 3.382801E-4 16.1875 6 CTAGGAC 80 3.382801E-4 16.1875 3 TACCGTG 115 1.2422879E-6 16.086956 7 CTAGACT 105 9.344056E-6 15.857144 4 GTATTGG 190 2.7284841E-11 15.578948 1 TTATGCG 95 7.0603004E-5 15.578948 4 GCCGATA 95 7.0603004E-5 15.578948 2 TAGGAAC 215 0.0 15.488372 30 >>END_MODULE