##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088501_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 448199 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.96549300645472 31.0 31.0 33.0 30.0 34.0 2 31.10689225098673 31.0 31.0 34.0 28.0 34.0 3 31.105616032164285 31.0 31.0 34.0 28.0 34.0 4 34.895611101318835 35.0 35.0 37.0 32.0 37.0 5 34.7266147403274 35.0 35.0 37.0 32.0 37.0 6 34.94448225007196 35.0 35.0 37.0 32.0 37.0 7 34.76394637203563 35.0 35.0 37.0 32.0 37.0 8 34.90643664979172 35.0 35.0 37.0 32.0 37.0 9 36.35470181771936 38.0 35.0 39.0 32.0 39.0 10 36.0938801737621 38.0 35.0 39.0 31.0 39.0 11 36.26725628571237 38.0 35.0 39.0 32.0 39.0 12 36.000899154170355 37.0 35.0 39.0 31.0 39.0 13 36.155692002882645 38.0 35.0 39.0 32.0 39.0 14 36.84684035439615 38.0 36.0 40.0 31.0 41.0 15 36.91679588754103 38.0 36.0 40.0 31.0 41.0 16 36.729147097606194 38.0 36.0 40.0 31.0 41.0 17 36.83763685327276 38.0 36.0 40.0 31.0 41.0 18 36.85682029634158 38.0 36.0 40.0 31.0 41.0 19 36.93668437457469 39.0 36.0 40.0 31.0 41.0 20 36.826164270781504 39.0 36.0 40.0 31.0 41.0 21 36.68567979848237 39.0 35.0 40.0 30.0 41.0 22 36.534289456246 38.0 35.0 40.0 30.0 41.0 23 36.335148003453824 38.0 35.0 40.0 30.0 41.0 24 36.465449498994865 38.0 35.0 40.0 30.0 41.0 25 36.3896974335061 38.0 35.0 40.0 30.0 41.0 26 36.08080116198385 38.0 35.0 40.0 29.0 41.0 27 36.01456942117229 38.0 35.0 40.0 29.0 41.0 28 35.82053953712525 38.0 34.0 40.0 29.0 41.0 29 35.5876385266366 38.0 34.0 40.0 27.0 41.0 30 35.38627038436052 38.0 34.0 40.0 27.0 41.0 31 35.03533698201022 37.0 34.0 40.0 26.0 41.0 32 34.84846017059387 37.0 33.0 40.0 26.0 41.0 33 34.61887688281321 37.0 33.0 40.0 25.0 41.0 34 34.36460590050402 37.0 33.0 40.0 24.0 41.0 35 34.12016537297049 36.0 33.0 40.0 24.0 41.0 36 34.02881978763897 37.0 33.0 40.0 23.0 41.0 37 33.82890189402475 37.0 33.0 40.0 22.0 41.0 38 33.6372281062653 36.0 33.0 40.0 21.0 41.0 39 33.418410125859275 36.0 32.0 40.0 20.0 41.0 40 33.16345864225489 36.0 31.0 40.0 18.0 41.0 41 32.942654936758004 36.0 31.0 39.0 17.0 41.0 42 32.579086521835166 36.0 31.0 39.0 15.0 41.0 43 32.11024120981975 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 3.0 15 4.0 16 24.0 17 43.0 18 75.0 19 197.0 20 369.0 21 726.0 22 1275.0 23 1883.0 24 3000.0 25 4426.0 26 6115.0 27 8240.0 28 10755.0 29 13655.0 30 16599.0 31 19708.0 32 24028.0 33 28829.0 34 34876.0 35 43247.0 36 56313.0 37 71363.0 38 71034.0 39 31408.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.05876630693063 24.846552535815565 16.59887683819018 19.49580431906363 2 22.089295156838816 26.46123708442009 31.571913368838395 19.8775543899027 3 22.947173019127664 24.754852197349837 33.14509849419566 19.15287628932684 4 16.91012251254465 18.801916113155094 32.87780651005468 31.41015486424557 5 11.562944138652696 41.714060049219206 33.52841037128597 13.194585440842127 6 31.92242731465264 38.63239320034182 12.381999959839268 17.063179525166277 7 23.865961325214915 35.881606161548774 20.617404322633472 19.635028190602835 8 28.505641467294662 35.33341216736316 18.026367751824523 18.134578613517657 9 24.33227204879975 14.339166307823087 21.90053971561739 39.428021927759765 10 16.967239998304326 30.237238369563517 31.436705570516665 21.35881606161549 11 33.446973331042685 22.946726788770167 22.382022271357144 21.224277608830004 12 20.43221872427203 30.09377530962809 30.711135009225814 18.762870956874067 13 33.71515777589865 21.130792348934293 25.865519557160994 19.288530318006064 14 19.400087907380428 24.279839981793803 29.73969152095386 26.58038058987191 15 22.572562634008555 31.467718580362742 25.94695659740428 20.01276218822443 16 20.218251267852004 28.5951106539729 28.17855461524903 23.008083462926066 17 21.078137166749592 28.154904406301668 28.45254005475247 22.31441837219628 18 21.9344532227872 25.444724330040895 31.21091300962296 21.409909437548947 19 22.126332276511103 25.102242530661606 33.618325788321705 19.15309940450559 20 22.777159252921138 24.71982311428629 32.687935492939516 19.815082139853057 21 21.472158572419843 25.347446112106454 33.79681793132068 19.38357738415302 22 19.892056876521366 26.06966994571608 33.09199708165346 20.946276096109095 23 20.852567721034628 26.189259681525396 33.635282541906605 19.322890055533367 24 20.610041521734765 26.328037322707097 32.1044893005116 20.95743185504653 25 20.690809216441806 26.31308860573094 32.753531355491646 20.242570822335615 26 20.002498890001984 27.70577355148048 32.87825274041219 19.41347481810535 27 19.46122146635758 27.09309927063648 32.596458269652544 20.8492209933534 28 19.667603006700148 27.59243104067613 32.69373648758699 20.046229465036735 29 20.01588580072691 26.57034040682822 31.686148340357747 21.727625452087132 30 19.867960437216503 27.381140966401084 33.59802230705557 19.15287628932684 31 21.019234759559925 27.236785445750662 32.806186537676346 18.93779325701307 32 20.135475536536227 26.972617074112172 32.03800097724449 20.853906412107122 33 19.81999067378553 27.056954611679185 32.87713716451844 20.245917550016845 34 19.21579476973398 27.377794238719854 33.34835642203575 20.058054569510418 35 18.430652455717215 29.31911940901251 32.62434766699614 19.625880468274136 36 21.22226957222127 27.12924392959377 31.80551496098831 19.842971537196647 37 19.83226200861671 28.430674767235093 31.669637817130337 20.067425407017865 38 20.004953156968224 26.29970169500601 33.27584398894241 20.419501159083353 39 19.15979285986805 26.439818027260216 33.73635371787978 20.664035394991956 40 18.092856075091646 26.604923259534267 33.41283670869413 21.889383956679957 41 19.366620630568118 25.912150629519477 33.55027565880334 21.17095308110906 42 18.827351243532448 27.475964917369293 32.431353037378486 21.265330801719774 43 18.831367316749926 27.479534760229274 31.965042313793653 21.724055609227154 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 270.0 1 199.0 2 128.0 3 230.0 4 332.0 5 332.0 6 592.0 7 852.0 8 956.5 9 1061.0 10 1776.5 11 2492.0 12 2492.0 13 4963.0 14 7434.0 15 13393.0 16 19352.0 17 16747.5 18 14143.0 19 14143.0 20 15302.5 21 16462.0 22 12496.0 23 8530.0 24 9007.0 25 9484.0 26 9484.0 27 10100.0 28 10716.0 29 11181.0 30 11646.0 31 12526.0 32 13406.0 33 13406.0 34 14738.5 35 16071.0 36 17468.0 37 18865.0 38 19554.0 39 20243.0 40 20243.0 41 21141.5 42 22040.0 43 23289.5 44 24539.0 45 26420.0 46 28301.0 47 28301.0 48 38085.0 49 47869.0 50 43931.0 51 39993.0 52 35649.0 53 31305.0 54 31305.0 55 27753.0 56 24201.0 57 20355.5 58 16510.0 59 14515.5 60 12521.0 61 12521.0 62 10962.5 63 9404.0 64 8067.5 65 6731.0 66 5669.0 67 4607.0 68 4607.0 69 3900.0 70 3193.0 71 2702.0 72 2211.0 73 1802.0 74 1393.0 75 1393.0 76 1109.0 77 825.0 78 656.5 79 488.0 80 375.5 81 263.0 82 263.0 83 197.0 84 131.0 85 109.0 86 87.0 87 66.5 88 46.0 89 46.0 90 43.0 91 40.0 92 25.0 93 10.0 94 6.0 95 2.0 96 2.0 97 2.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 448199.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.818843410054846 #Duplication Level Percentage of deduplicated Percentage of total 1 87.22661483084096 53.050218285860836 2 7.208272677217134 8.767976144252913 3 2.1141035544713067 3.8573199909609217 4 0.9872601364123088 2.4017607856579835 5 0.5771309485925284 1.75502183947727 6 0.3708724098853062 1.3533618613154466 7 0.250217049792935 1.0652538098917685 8 0.19519137486218377 0.9497050930189176 9 0.14085850309589681 0.7710166118487667 >10 0.8273077271471951 9.103509970144016 >50 0.05623068531488809 2.3335687552525153 >100 0.03785464435073142 4.8678601858147 >500 0.00441024982726968 1.8552318643705576 >1k 0.00257264573257398 2.4234245630729623 >5k 7.3504163787828E-4 3.1015900421693807 >10k+ 3.6752081893914E-4 2.3431801968911516 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10483 2.3389164188228886 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8171 1.8230741255558358 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5705 1.2728720947614787 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3082 0.6876409809035718 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1726 0.38509679852030015 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1545 0.3447129511667808 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1226 0.2735392091459374 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1154 0.25747491627602914 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1072 0.23917947161863368 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1037 0.23137044036242832 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 975 0.2175372992800073 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 943 0.2103976135600481 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 901 0.20102677605260164 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 781 0.17425295460275458 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 689 0.15372635815787183 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 641 0.14301682957793302 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 621 0.1385545260029585 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 575 0.12829122778051713 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 558 0.12449826974178882 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 549 0.12249023313305027 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 547 0.12204400277555283 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 520 0.11601989294933723 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 477 0.10642594026314205 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 476 0.10620282508439331 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 2.2311517874872545E-4 0.0 11 0.0 0.0 0.0 2.2311517874872545E-4 0.0 12 0.0 0.0 0.0 8.924607149949018E-4 0.0 13 0.0 0.0 0.0 8.924607149949018E-4 0.0 14 0.0 0.0 0.0 0.0011155758937436272 0.0 15 0.0 0.0 0.0 0.0011155758937436272 0.0 16 0.0 0.0 0.0 0.0013386910724923528 0.0 17 0.0 0.0 0.0 0.00245426696623598 0.0 18 0.0 0.0 0.0 0.0026773821449847055 0.0 19 0.0 0.0 0.0 0.003569842859979607 0.0 20 0.0 0.0 0.0 0.006024109826215587 0.0 21 0.0 0.0 0.0 0.010263298222441371 0.0 22 0.0 0.0 0.0 0.01963413572988784 0.0 23 0.0 0.0 0.0 0.022980863411118723 0.0 24 0.0 0.0 0.0 0.028558742879836858 0.0 25 0.0 0.0 0.0 0.030566779488575387 0.0 26 0.0 0.0 0.0 0.0359215437785448 0.0 27 0.0 0.0 0.0 0.08009834917079243 0.0 28 0.0 0.0 0.0 0.2016961215888478 0.0 29 0.0 0.0 0.0 0.36434708689666867 0.0 30 0.0 0.0 0.0 0.6166903540614772 0.0 31 0.0 0.0 0.0 0.9096405837585537 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGAA 45 1.3214527E-4 24.666668 4 GGTATCA 2715 0.0 22.554327 1 TGTGCTA 50 2.6985392E-4 22.2 10 AATACTG 50 2.6985392E-4 22.2 5 GTAACGA 50 2.6985392E-4 22.2 3 TTGGAGT 45 0.0038222205 20.555557 4 AGTACCG 45 0.0038222205 20.555557 5 TATACTG 75 9.245099E-6 19.733334 5 GGACCCT 125 4.0927262E-10 19.240002 6 GGCGTCG 50 0.00702835 18.5 8 GACCCTC 120 5.14774E-9 18.5 7 ACGGCTT 50 0.00702835 18.5 15 AAATTCG 50 0.00702835 18.5 26 TGCTAGG 50 0.00702835 18.5 2 TAATCCT 50 0.00702835 18.5 4 ACAGTGC 105 4.781141E-7 17.619047 8 ATTGGAC 105 4.781141E-7 17.619047 3 TTGGACC 160 3.274181E-11 17.34375 4 TGGACCC 140 1.8590072E-9 17.178572 5 ATATAAC 65 0.0015779017 17.076923 3 >>END_MODULE