##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088498_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2626160 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.325489688366282 31.0 31.0 34.0 30.0 34.0 2 31.449837024400647 31.0 31.0 34.0 30.0 34.0 3 31.593667560240046 31.0 31.0 34.0 30.0 34.0 4 35.29870419167149 37.0 35.0 37.0 33.0 37.0 5 35.18948426600055 37.0 35.0 37.0 33.0 37.0 6 35.27657911170682 37.0 35.0 37.0 32.0 37.0 7 35.08755559448015 37.0 35.0 37.0 32.0 37.0 8 35.160951731806136 37.0 35.0 37.0 32.0 37.0 9 36.67140387485911 39.0 35.0 39.0 32.0 39.0 10 36.548678679136074 38.0 35.0 39.0 32.0 39.0 11 36.577144195327016 38.0 35.0 39.0 32.0 39.0 12 36.41561367167271 38.0 35.0 39.0 32.0 39.0 13 36.44902519267676 38.0 35.0 39.0 32.0 39.0 14 37.31937886495872 39.0 36.0 41.0 32.0 41.0 15 37.35042267036281 39.0 36.0 41.0 32.0 41.0 16 37.20366009687148 39.0 36.0 40.0 32.0 41.0 17 37.33801405854936 39.0 36.0 40.0 32.0 41.0 18 37.22454762847656 39.0 36.0 40.0 31.0 41.0 19 37.33014058549365 39.0 36.0 40.0 31.0 41.0 20 37.236475690742374 39.0 36.0 40.0 31.0 41.0 21 37.07257478599933 39.0 36.0 40.0 31.0 41.0 22 36.9862582630152 39.0 36.0 40.0 31.0 41.0 23 36.772263685380935 39.0 35.0 40.0 30.0 41.0 24 36.9631762725805 39.0 36.0 40.0 31.0 41.0 25 36.92195753495598 39.0 36.0 40.0 30.0 41.0 26 36.701992262466874 39.0 35.0 40.0 30.0 41.0 27 36.62984357388735 39.0 35.0 40.0 30.0 41.0 28 36.417878575562796 38.0 35.0 40.0 30.0 41.0 29 36.23210314679989 38.0 35.0 40.0 30.0 41.0 30 36.016136107472505 38.0 35.0 40.0 29.0 41.0 31 35.691640265634994 38.0 34.0 40.0 28.0 41.0 32 35.54050743290584 38.0 34.0 40.0 27.0 41.0 33 35.31255597526427 38.0 34.0 40.0 27.0 41.0 34 35.18030165717245 38.0 34.0 40.0 26.0 41.0 35 34.904692021811314 38.0 33.0 40.0 25.0 41.0 36 34.72005627989155 38.0 33.0 40.0 24.0 41.0 37 34.52992696560758 37.0 33.0 40.0 24.0 41.0 38 34.385079736192765 37.0 33.0 40.0 23.0 41.0 39 34.24437201084473 37.0 33.0 40.0 23.0 41.0 40 34.05466460535535 37.0 33.0 40.0 21.0 41.0 41 33.80132589027325 37.0 33.0 40.0 20.0 41.0 42 33.49819203704268 37.0 32.0 40.0 18.0 41.0 43 33.139697124318396 37.0 31.0 40.0 16.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 1.0 13 5.0 14 10.0 15 20.0 16 39.0 17 118.0 18 262.0 19 684.0 20 1379.0 21 2809.0 22 5046.0 23 8636.0 24 13831.0 25 20876.0 26 29778.0 27 40732.0 28 54805.0 29 69898.0 30 86625.0 31 105307.0 32 127010.0 33 154211.0 34 184885.0 35 220717.0 36 277841.0 37 369377.0 38 440426.0 39 410829.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.72076339598501 21.355857982758096 14.403577847503579 22.519800773753314 2 19.178534438114966 24.265733999451673 34.60520303408779 21.95052852834557 3 20.07794650744814 24.710109056569287 33.24230054528285 21.96964389069973 4 13.763098973406038 16.305708715386725 35.8595439729491 34.07164833825814 5 12.053835257562373 39.26744752794956 34.6313629024888 14.04735431199927 6 32.27248149389222 37.062897919395624 12.847998598714472 17.816621987997685 7 25.62163006062083 33.58081761964237 20.802312121119808 19.995240198616994 8 27.97784598044293 33.77280896822737 18.35611691595333 19.89322813537637 9 24.35483748134158 14.283440460596461 21.99945928656289 39.362262771499076 10 16.692128430864837 27.778391263289365 32.66834465531422 22.861135650531576 11 32.763502604563314 22.3830231212112 23.677879489444663 21.17559478478082 12 21.57397112133305 27.630228165839092 30.533440460596463 20.262360252231396 13 32.55231973680202 20.777713467572426 26.39142321869193 20.27854357693362 14 20.43100953483413 23.360952874158468 28.01192615834526 28.196111432662136 15 22.2752612178999 29.628126237548358 26.25213239101959 21.844480153532153 16 21.420591281567003 28.40885551527706 26.834541688244435 23.336011514911505 17 21.612925335851585 26.464191062235354 26.940704298291042 24.98217930362202 18 23.2132086392299 24.992841258719956 30.147173058762604 21.64677704328754 19 22.674627593139792 24.150965668504583 31.520280561732722 21.654126176622903 20 23.915184147195905 23.715539037987025 31.401018978280078 20.968257836536996 21 22.52539830017973 24.787217838974016 32.172982605781826 20.514401255064428 22 20.702051664788133 25.266739269503763 31.611440277820087 22.41976878788802 23 22.094426843756665 25.553012763883387 32.744273006975966 19.60828738538398 24 21.98190513906236 25.562113504127698 29.703445334633077 22.752536022176866 25 21.699058701678496 26.059684101501812 31.054657751241354 21.186599445578334 26 21.59441922807445 26.813865111036645 30.992209157096294 20.599506503792608 27 20.11077009778536 26.941694336978706 30.55556401742468 22.391971547811256 28 20.858706247905687 26.309059615560358 30.687581868583784 22.144652267950164 29 21.2324077740884 26.269876930575442 29.841974594084135 22.655740701252018 30 21.177041764401256 26.507752764492643 32.024895665153686 20.29030980595242 31 22.122262162244493 26.269724616931185 31.61045023913242 19.9975629816919 32 21.59910287263533 26.06585280409419 30.325456179364547 22.00958814390593 33 21.093155024827123 26.16885490602248 31.12727328114053 21.61071678800987 34 20.095196027660158 27.10272793736863 31.690986078532912 21.1110899564383 35 19.557262314558137 29.703521491455202 30.253297590398148 20.48591860358851 36 22.451792731592896 26.68298961220946 30.131751302281657 20.733466353915983 37 21.281643159594235 27.715676120266853 29.900653425533857 21.10202729460505 38 21.00869710908703 25.826948853078257 31.6258339172023 21.538520120632406 39 20.53858104609011 25.556820604989795 32.43412434885917 21.47047400006093 40 19.128118621866147 26.49373990922107 31.777271758004083 22.600869710908704 41 21.086986322234747 25.183195235629206 31.803926645748927 21.92589179638712 42 19.528931976726476 27.54752185700795 31.09067992810796 21.832866238157614 43 19.892276175099767 27.42822219514424 30.137424985530203 22.54207664422579 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 244.0 1 408.5 2 573.0 3 1355.5 4 2138.0 5 2138.0 6 3501.0 7 4864.0 8 5554.5 9 6245.0 10 9675.5 11 13106.0 12 13106.0 13 25625.5 14 38145.0 15 61336.0 16 84527.0 17 76162.5 18 67798.0 19 67798.0 20 70579.5 21 73361.0 22 55750.5 23 38140.0 24 41362.0 25 44584.0 26 44584.0 27 48141.5 28 51699.0 29 55224.5 30 58750.0 31 64302.0 32 69854.0 33 69854.0 34 77257.5 35 84661.0 36 93659.0 37 102657.0 38 109241.0 39 115825.0 40 115825.0 41 120106.5 42 124388.0 43 133191.0 44 141994.0 45 156299.5 46 170605.0 47 170605.0 48 237832.5 49 305060.0 50 283288.0 51 261516.0 52 236292.0 53 211068.0 54 211068.0 55 185070.5 56 159073.0 57 133080.5 58 107088.0 59 94526.0 60 81964.0 61 81964.0 62 72074.5 63 62185.0 64 54051.0 65 45917.0 66 39638.5 67 33360.0 68 33360.0 69 28667.0 70 23974.0 71 20233.5 72 16493.0 73 13529.0 74 10565.0 75 10565.0 76 8310.0 77 6055.0 78 4781.5 79 3508.0 80 2678.0 81 1848.0 82 1848.0 83 1435.5 84 1023.0 85 811.5 86 600.0 87 464.0 88 328.0 89 328.0 90 281.0 91 234.0 92 155.5 93 77.0 94 59.5 95 42.0 96 42.0 97 29.0 98 16.0 99 12.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2626160.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.725108296657126 #Duplication Level Percentage of deduplicated Percentage of total 1 79.1832390616874 35.4147894231406 2 11.480551958753603 10.26937859321308 3 3.772063954308387 5.06117906575078 4 1.6876271687941438 3.0191723155479577 5 0.8731798688289815 1.952653209791853 6 0.55907754562669 1.5002882264629784 7 0.37041550451351796 1.1596811487889582 8 0.2604378167163674 0.9318487645747577 9 0.2015389340662841 0.8112465586896658 >10 1.3521009010425113 11.758368683416455 >50 0.14582935242279496 4.487838355058433 >100 0.09873512955556951 8.612834044517252 >500 0.008159696892444704 2.38895743482362 >1k 0.006184191329010654 5.759919740464648 >5k 4.294577311812954E-4 1.6729002118044969 >10k+ 4.294577311812954E-4 5.198944223954565 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 43207 1.6452539068449752 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 35583 1.354944100892558 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29786 1.134203551954184 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15625 0.5949751728759862 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11135 0.4240031071983428 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 9703 0.36947482255460445 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9054 0.3447619337740275 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8611 0.3278931976726475 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8455 0.32195296554665365 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7725 0.29415572546988755 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4952 0.18856429158924057 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4927 0.187612331312639 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4777 0.1819005696530295 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4561 0.17367563286319188 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4532 0.17257135894233405 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3947 0.15029548846985713 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3900 0.14850580314984616 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3710 0.14127090504767417 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3607 0.13734882870807566 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3524 0.13418832058975844 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3345 0.12737228500929113 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3118 0.11872848569774881 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3114 0.11857617205349255 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3094 0.1178146038322113 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2924 0.11134127395132055 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2850 0.10852347153257988 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 2675 0.10185974959636886 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2666 0.10151704389679227 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 3.8078411064063116E-5 0.0 0.0 3.8078411064063116E-5 6 0.0 3.8078411064063116E-5 0.0 0.0 7.615682212812623E-5 7 3.8078411064063116E-5 3.8078411064063116E-5 0.0 0.0 7.615682212812623E-5 8 3.8078411064063116E-5 3.8078411064063116E-5 0.0 0.0 7.615682212812623E-5 9 3.8078411064063116E-5 3.8078411064063116E-5 0.0 1.903920553203156E-4 1.1423523319218936E-4 10 3.8078411064063116E-5 3.8078411064063116E-5 0.0 3.046272885125049E-4 1.1423523319218936E-4 11 7.615682212812623E-5 7.615682212812623E-5 0.0 5.711761659609468E-4 1.1423523319218936E-4 12 7.615682212812623E-5 7.615682212812623E-5 0.0 8.377250434093886E-4 1.1423523319218936E-4 13 7.615682212812623E-5 7.615682212812623E-5 0.0 9.138818655375149E-4 1.1423523319218936E-4 14 7.615682212812623E-5 1.1423523319218936E-4 0.0 0.0011042739208578305 1.5231364425625246E-4 15 7.615682212812623E-5 1.1423523319218936E-4 0.0 0.0014469796204343984 1.5231364425625246E-4 16 7.615682212812623E-5 1.1423523319218936E-4 0.0 0.0020562341974594083 1.5231364425625246E-4 17 7.615682212812623E-5 1.1423523319218936E-4 0.0 0.003274743351509428 1.5231364425625246E-4 18 1.1423523319218936E-4 1.1423523319218936E-4 0.0 0.003960154750662565 1.5231364425625246E-4 19 1.1423523319218936E-4 1.1423523319218936E-4 0.0 0.00525482072684071 1.5231364425625246E-4 20 1.1423523319218936E-4 1.5231364425625246E-4 0.0 0.008491485667286075 1.5231364425625246E-4 21 1.1423523319218936E-4 1.5231364425625246E-4 0.0 0.015650226947329943 1.5231364425625246E-4 22 2.2847046638437872E-4 1.5231364425625246E-4 0.0 0.025322143357601974 1.5231364425625246E-4 23 2.2847046638437872E-4 1.5231364425625246E-4 0.0 0.030120023151673926 1.5231364425625246E-4 24 2.2847046638437872E-4 1.903920553203156E-4 0.0 0.03724068602065373 1.5231364425625246E-4 25 2.2847046638437872E-4 1.903920553203156E-4 0.0 0.042800134036006944 1.5231364425625246E-4 26 2.2847046638437872E-4 1.903920553203156E-4 0.0 0.053081305023303986 1.903920553203156E-4 27 2.2847046638437872E-4 1.903920553203156E-4 0.0 0.11038931367471898 1.903920553203156E-4 28 2.2847046638437872E-4 1.903920553203156E-4 0.0 0.22340603771285833 1.903920553203156E-4 29 2.2847046638437872E-4 1.903920553203156E-4 0.0 0.37400615347122795 1.903920553203156E-4 30 2.2847046638437872E-4 2.2847046638437872E-4 0.0 0.5865217656197642 1.903920553203156E-4 31 3.046272885125049E-4 2.6654887744844184E-4 0.0 0.7886038931367472 1.903920553203156E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11745 0.0 23.186035 1 GTATTGG 1315 0.0 21.946768 1 ATTGGAC 1600 0.0 17.690624 3 TATTGGA 1730 0.0 17.002892 2 TTGGACC 2025 0.0 16.992594 4 TGGACCC 1955 0.0 16.749361 5 GGACCCT 2020 0.0 16.668318 6 CTAATAC 535 0.0 16.598131 3 TAATACG 105 9.352167E-6 15.857142 4 GACCCTC 2170 0.0 15.260368 7 TAATACT 600 0.0 15.108334 4 GTATCAA 18190 0.0 14.9403515 2 GTCGGGT 230 1.8189894E-12 14.47826 24 TTTTTAC 1745 0.0 14.418339 1 CTCTAAT 520 0.0 14.230769 1 ATACTGG 540 0.0 14.046295 6 GGTAAGA 330 0.0 14.015151 2 TAGCGAA 330 0.0 14.015151 10 GGCGTAT 80 0.0063014654 13.875 1 ACCGTTA 400 0.0 13.874999 8 >>END_MODULE