##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088495_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1038791 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.662147631236696 31.0 30.0 31.0 28.0 34.0 2 30.808461952404286 31.0 31.0 33.0 27.0 34.0 3 30.8266773585832 31.0 30.0 34.0 27.0 34.0 4 34.59579645953806 35.0 35.0 37.0 32.0 37.0 5 34.378104931598365 35.0 35.0 37.0 30.0 37.0 6 34.624119770001855 35.0 35.0 37.0 31.0 37.0 7 34.448480974517494 35.0 35.0 37.0 30.0 37.0 8 34.56734126498978 35.0 35.0 37.0 30.0 37.0 9 35.95317826203731 37.0 35.0 39.0 30.0 39.0 10 35.70386054557654 37.0 35.0 39.0 30.0 39.0 11 35.83238399254518 37.0 35.0 39.0 30.0 39.0 12 35.58050271902625 37.0 35.0 39.0 30.0 39.0 13 35.69707958578771 37.0 35.0 39.0 30.0 39.0 14 36.36761966555351 38.0 35.0 40.0 30.0 41.0 15 36.453433847617084 38.0 35.0 40.0 30.0 41.0 16 36.22251829290011 38.0 34.0 40.0 30.0 41.0 17 36.38841499396895 38.0 35.0 40.0 30.0 41.0 18 36.26473563979665 38.0 35.0 40.0 30.0 41.0 19 36.39101320669894 38.0 35.0 40.0 30.0 41.0 20 36.29153602601486 38.0 34.0 40.0 30.0 41.0 21 36.11902009162574 38.0 34.0 40.0 29.0 41.0 22 36.00883623366009 38.0 34.0 40.0 29.0 41.0 23 35.78113788047836 38.0 34.0 40.0 27.0 41.0 24 35.973722336831955 38.0 34.0 40.0 29.0 41.0 25 35.91081940448078 38.0 34.0 40.0 29.0 41.0 26 35.62848445933783 38.0 34.0 40.0 27.0 41.0 27 35.54599914708541 38.0 34.0 40.0 27.0 41.0 28 35.298497965423266 38.0 34.0 40.0 27.0 41.0 29 35.12912029465022 38.0 33.0 40.0 26.0 41.0 30 34.906250631744015 37.0 33.0 40.0 25.0 41.0 31 34.55616096019315 37.0 33.0 40.0 25.0 41.0 32 34.39261218089106 37.0 33.0 40.0 25.0 41.0 33 34.155954373882714 37.0 33.0 40.0 24.0 41.0 34 34.00229208762879 36.0 33.0 39.0 24.0 40.0 35 33.680142588836446 36.0 32.0 39.0 23.0 40.0 36 33.530980726633175 36.0 32.0 39.0 22.0 40.0 37 33.33164419021728 36.0 31.0 39.0 21.0 40.0 38 33.17688639967039 36.0 31.0 39.0 20.0 40.0 39 33.02166075755373 36.0 31.0 39.0 19.0 40.0 40 32.835234421553515 36.0 31.0 39.0 18.0 40.0 41 32.554592791042666 36.0 30.0 39.0 16.0 40.0 42 32.24618041550225 35.0 30.0 39.0 15.0 40.0 43 31.873094780374494 35.0 30.0 39.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 4.0 13 2.0 14 11.0 15 20.0 16 55.0 17 118.0 18 256.0 19 577.0 20 1186.0 21 2180.0 22 3698.0 23 5879.0 24 8840.0 25 12755.0 26 17381.0 27 22781.0 28 28996.0 29 36448.0 30 44047.0 31 52621.0 32 62128.0 33 73195.0 34 85026.0 35 101934.0 36 125448.0 37 148286.0 38 146609.0 39 58309.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.71356220837493 25.04873453851641 16.00139007750356 20.236313175605105 2 22.61446238945081 25.992620267214484 31.23765993351887 20.15525740981583 3 23.20774823809602 25.106686523083084 32.51212226521023 19.17344297361067 4 17.257369384216844 18.852974274902266 33.27984166208602 30.609814678794866 5 11.759728376545427 41.379449764197034 33.94696334488843 12.913858514369108 6 32.11887665565066 38.02843882936991 12.595507662272777 17.257176852706657 7 24.87978813832619 34.338668702366505 20.819298588455233 19.96224457085208 8 28.121633706876555 35.101767342997775 18.07533950525178 18.701259444873898 9 24.36765432122535 13.973937009465812 21.89381694681606 39.76459172249278 10 16.88944166824703 29.071006583614988 32.48564918255934 21.55390256557864 11 33.770508215800874 22.41037898865123 22.989224974032314 20.829887821515587 12 20.21272806560704 28.93228763052433 31.027993118923824 19.826991184944806 13 32.97670079929457 20.70560873168905 26.53093836970093 19.786752099315454 14 19.793779499437328 23.678102717486 28.4742551677864 28.053862615290274 15 22.6278433294089 30.29242648424948 26.16869033328167 20.91103985305995 16 20.963600955341356 28.586115975205793 27.735993091969412 22.71428997748344 17 21.525311636315678 27.257359757641336 27.80135753967834 23.415971066364648 18 22.173083902344167 25.56481525157611 30.44914713354274 21.812953712536977 19 22.439354980934567 24.54083641463971 32.154398719280394 20.86540988514533 20 23.06652637537291 24.17791451793479 32.51606916116909 20.23948994552321 21 22.00413750215395 25.317315995229066 33.00028590929263 19.678260593324353 22 20.481309522319695 25.57145758867761 32.39795107966857 21.54928180933412 23 21.728047316543943 25.82203734918766 33.33846750693835 19.111447827330043 24 21.663356729120682 26.106983984266325 30.360293841590853 21.869365445022147 25 21.52396391574436 26.536040454720922 31.459167435990494 20.480828193544227 26 21.324886334209673 27.078209187411133 31.65670476544367 19.94019971293552 27 20.464366749423128 26.7582218174782 31.34008669693904 21.43732473615963 28 20.704742339893205 26.837448533920682 31.660170332627064 20.797638793559052 29 21.089324031494307 26.03151163227252 31.085463774715027 21.79370056151815 30 21.237958357359663 26.305676502780635 32.68713340797138 19.769231731888322 31 21.70706138193342 26.605640595653984 32.016834955250864 19.670463067161727 32 21.442523086934713 26.180145958137874 31.094705287204068 21.282625667723345 33 21.102993768717674 26.667635741934614 31.385427867588376 20.843942621759336 34 20.26856220356164 27.232041864051578 32.20089507899087 20.298500853395918 35 19.703771018424305 29.228304827438823 31.125029000058724 19.942895154078155 36 22.533214092151358 26.439678433871684 30.915362185463678 20.11174528851328 37 21.147853610591543 27.545290631127916 30.75844900466023 20.548406753620316 38 21.13360627883761 25.646448611895945 32.33133517714343 20.888609932123018 39 20.405355841550417 25.83715107273744 32.94887999607236 20.80861308963978 40 19.32958602837337 26.749076570744258 31.828731669796905 22.092605731085463 41 21.148720002387392 25.572323980473456 31.907188260198634 21.37176775694052 42 20.07218006316959 27.63809081903867 30.860201907794732 21.42952720999701 43 20.618295691818663 27.12691965948877 30.094889154796295 22.15989549389627 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 100.0 1 133.0 2 166.0 3 284.0 4 402.0 5 402.0 6 845.0 7 1288.0 8 1587.5 9 1887.0 10 3083.0 11 4279.0 12 4279.0 13 9638.5 14 14998.0 15 25145.0 16 35292.0 17 30343.0 18 25394.0 19 25394.0 20 28835.0 21 32276.0 22 24528.0 23 16780.0 24 17747.5 25 18715.0 26 18715.0 27 20114.5 28 21514.0 29 23367.5 30 25221.0 31 27971.0 32 30721.0 33 30721.0 34 34781.0 35 38841.0 36 42551.5 37 46262.0 38 49197.0 39 52132.0 40 52132.0 41 53744.0 42 55356.0 43 58500.5 44 61645.0 45 65874.0 46 70103.0 47 70103.0 48 93016.5 49 115930.0 50 105769.0 51 95608.0 52 85912.0 53 76216.0 54 76216.0 55 66508.0 56 56800.0 57 47967.5 58 39135.0 59 34371.5 60 29608.0 61 29608.0 62 26162.0 63 22716.0 64 19535.5 65 16355.0 66 13928.5 67 11502.0 68 11502.0 69 9765.0 70 8028.0 71 6672.0 72 5316.0 73 4408.5 74 3501.0 75 3501.0 76 2756.5 77 2012.0 78 1631.5 79 1251.0 80 966.5 81 682.0 82 682.0 83 525.0 84 368.0 85 275.5 86 183.0 87 145.0 88 107.0 89 107.0 90 87.0 91 67.0 92 46.0 93 25.0 94 16.0 95 7.0 96 7.0 97 4.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1038791.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.0845334197647 #Duplication Level Percentage of deduplicated Percentage of total 1 86.79182924880408 47.8088741881826 2 7.575713574606628 8.346092951579678 3 2.062450806516915 3.4082742113460505 4 0.9284981312956245 2.0458354537417165 5 0.48769749779067584 1.3432294557893052 6 0.3421143379884839 1.1307125210584392 7 0.2567599215802152 0.9900450336799069 8 0.19123274107262053 0.8427173053254381 9 0.1487211119914176 0.7373009757344231 >10 1.0282459504969266 10.76657560054848 >50 0.10894834802110016 4.19119014787656 >100 0.06670085309820654 7.100193530950776 >500 0.006863676075312579 2.539065637246435 >1k 0.003343842190536897 3.3501008448064242 >5k 5.279750827163523E-4 2.053181288658022 >10k+ 3.5198338847756814E-4 3.3466108534757817 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18308 1.7624334442635718 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16213 1.5607566873413419 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9603 0.9244400461690561 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6491 0.6248610163160828 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5085 0.48951136465371764 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4037 0.3886248533150557 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3521 0.33895172368647786 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2969 0.2858130268745109 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2720 0.2618428538560692 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2297 0.22112243945124668 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1964 0.18906594300489704 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1935 0.18627423610716687 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1751 0.16856133716984456 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1359 0.13082516117294046 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1346 0.1295737063567166 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1335 0.12851478305068104 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1328 0.12784092276502204 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1270 0.12225750896956172 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1187 0.11426745129674785 No Hit TTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCC 1180 0.11359359101108886 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1165 0.11214960468467669 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1074 0.10338942097110969 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1071 0.10310062370582726 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1048 0.10088651133866196 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 9.62657550941431E-5 0.0 11 9.62657550941431E-5 0.0 0.0 9.62657550941431E-5 0.0 12 9.62657550941431E-5 0.0 0.0 9.62657550941431E-5 0.0 13 9.62657550941431E-5 0.0 0.0 1.925315101882862E-4 0.0 14 9.62657550941431E-5 0.0 0.0 2.887972652824293E-4 0.0 15 9.62657550941431E-5 0.0 0.0 3.850630203765724E-4 0.0 16 9.62657550941431E-5 0.0 0.0 3.850630203765724E-4 0.0 17 9.62657550941431E-5 0.0 0.0 6.738602856590016E-4 0.0 18 9.62657550941431E-5 0.0 0.0 0.0014439863264121464 0.0 19 9.62657550941431E-5 0.0 0.0 0.0024066438773535774 0.0 20 9.62657550941431E-5 0.0 0.0 0.004717021999613011 0.0 21 9.62657550941431E-5 0.0 0.0 0.007893791917719734 0.0 22 9.62657550941431E-5 0.0 0.0 0.013766002978462463 0.0 23 9.62657550941431E-5 0.0 0.0 0.01732783591694576 0.0 24 9.62657550941431E-5 0.0 0.0 0.021852326406370484 0.0 25 9.62657550941431E-5 0.0 0.0 0.02493283056938306 0.0 26 9.62657550941431E-5 0.0 0.0 0.03138263616069065 0.0 27 9.62657550941431E-5 0.0 0.0 0.06902254640250059 0.0 28 9.62657550941431E-5 0.0 0.0 0.14324344358008492 0.0 29 9.62657550941431E-5 0.0 0.0 0.23787268083762758 0.0 30 1.925315101882862E-4 0.0 0.0 0.3815974531931832 0.0 31 1.925315101882862E-4 0.0 0.0 0.5214715953449731 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4390 0.0 25.116175 1 CGTAGAC 40 0.001931063 23.125 3 CGTAATA 45 0.0038255635 20.555557 2 TCACGTA 250 0.0 17.76 25 CCGGTCT 255 0.0 17.411764 9 CTACCCT 65 0.0015797958 17.076923 4 GTATCAA 6465 0.0 17.026295 2 TCCGGTC 265 0.0 16.754715 8 CCCATAG 200 0.0 16.65 1 CTAGTCC 90 4.445293E-5 16.444445 3 GTATTGG 330 0.0 16.257576 1 CGGTCTG 285 0.0 16.22807 10 ATACTCG 80 3.3821742E-4 16.1875 26 CACGTAG 275 0.0 16.145454 26 TACTCGC 70 0.0025922684 15.857143 27 CGAACTA 175 1.3096724E-10 15.857142 24 GTATACT 95 7.058631E-5 15.578948 4 GTAAGAT 145 5.3429176E-8 15.310345 3 ACGGGTA 85 5.363534E-4 15.235294 5 GATACCT 285 0.0 14.929824 36 >>END_MODULE