##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088494_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2408671 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.320046199750816 31.0 31.0 34.0 30.0 34.0 2 31.45614739414391 31.0 31.0 34.0 30.0 34.0 3 31.59993207872723 31.0 31.0 34.0 30.0 34.0 4 35.32318236903255 37.0 35.0 37.0 33.0 37.0 5 35.18697323129643 37.0 35.0 37.0 33.0 37.0 6 35.265120890316695 37.0 35.0 37.0 32.0 37.0 7 35.095943779785614 37.0 35.0 37.0 32.0 37.0 8 35.14928398274401 37.0 35.0 37.0 32.0 37.0 9 36.67898729216236 39.0 35.0 39.0 32.0 39.0 10 36.52879658533689 38.0 35.0 39.0 32.0 39.0 11 36.56606028801775 38.0 35.0 39.0 32.0 39.0 12 36.41876702961924 38.0 35.0 39.0 32.0 39.0 13 36.44454597576838 38.0 35.0 39.0 32.0 39.0 14 37.373626369064105 39.0 36.0 41.0 32.0 41.0 15 37.39740421170014 39.0 36.0 41.0 32.0 41.0 16 37.265151197486084 39.0 36.0 40.0 32.0 41.0 17 37.34930590354598 39.0 36.0 40.0 32.0 41.0 18 37.22434861382065 39.0 36.0 40.0 31.0 41.0 19 37.316780083290745 39.0 36.0 40.0 31.0 41.0 20 37.22713521273764 39.0 36.0 40.0 31.0 41.0 21 37.0687636460106 39.0 36.0 40.0 31.0 41.0 22 36.974692268059854 39.0 36.0 40.0 31.0 41.0 23 36.77370176333754 39.0 35.0 40.0 30.0 41.0 24 36.97402509516659 39.0 36.0 40.0 31.0 41.0 25 36.93102212797015 39.0 36.0 40.0 31.0 41.0 26 36.72832279709433 39.0 35.0 40.0 30.0 41.0 27 36.65975178843437 39.0 35.0 40.0 30.0 41.0 28 36.472717527632454 39.0 35.0 40.0 30.0 41.0 29 36.30365998511212 38.0 35.0 40.0 30.0 41.0 30 36.11944678206363 38.0 35.0 40.0 29.0 41.0 31 35.85217117655338 38.0 35.0 40.0 29.0 41.0 32 35.71064084717257 38.0 34.0 40.0 28.0 41.0 33 35.51719931862841 38.0 34.0 40.0 27.0 41.0 34 35.399690534738866 38.0 34.0 40.0 27.0 41.0 35 35.150415312012306 38.0 34.0 40.0 26.0 41.0 36 34.99732217475944 38.0 33.0 40.0 25.0 41.0 37 34.83367259372492 38.0 33.0 40.0 25.0 41.0 38 34.73096740899857 38.0 33.0 40.0 24.0 41.0 39 34.62883349365688 38.0 33.0 40.0 24.0 41.0 40 34.49217431521366 38.0 33.0 40.0 23.0 41.0 41 34.276547523509855 38.0 33.0 40.0 22.0 41.0 42 34.04738006975631 38.0 33.0 40.0 21.0 41.0 43 33.69859312459028 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 2.0 13 2.0 14 14.0 15 20.0 16 35.0 17 104.0 18 255.0 19 585.0 20 1174.0 21 2469.0 22 4351.0 23 7339.0 24 11854.0 25 17710.0 26 25437.0 27 34870.0 28 47003.0 29 60895.0 30 76628.0 31 93771.0 32 113779.0 33 139099.0 34 167351.0 35 201668.0 36 253470.0 37 332647.0 38 420832.0 39 395306.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.06613148910748 21.683990881278515 14.086025032061247 23.163852597552758 2 19.303798650791247 24.060737228122893 34.27911076274012 22.356353358345743 3 19.76488279221197 24.886420768963465 32.754286492426736 22.59440994639783 4 14.065474280215106 16.822720911241095 36.15101439756613 32.96079041097767 5 12.347348392536798 39.14507211653231 34.84913464728059 13.658444843650294 6 32.13311406995808 37.84352449960995 13.521938031387434 16.501423399044533 7 25.866131156974113 33.167626462891775 21.55014113592101 19.416101244213095 8 27.209652127667084 34.37854318833913 18.871651628636705 19.54015305535708 9 24.67086621626615 14.303738451619171 21.626988492824466 39.39840683929021 10 16.521475950845925 27.896254822680227 33.344404445439004 22.23786478103485 11 33.22587435145771 22.84085290186995 23.210807951770914 20.72246479490142 12 20.978581134575872 27.77162177815069 30.622654567601803 20.627142519671636 13 31.230707722225244 21.27600656129459 26.03091082177682 21.462374894703345 14 20.437411335960785 23.408219719505073 27.733177341363763 28.42119160317038 15 22.70322513950639 29.895822218974693 25.543754211347252 21.85719843017166 16 21.746681053576847 28.62067920442435 26.604961823345736 23.027677918653065 17 21.73912501956473 27.227296712585485 27.11121610215758 23.922362165692203 18 22.691019238409897 26.003758919337677 29.445906061890557 21.859315780361868 19 22.674204986899415 25.456776786867113 30.501467406715154 21.367550819518318 20 23.492041877035096 25.077605036138184 30.263493852003865 21.166859234822855 21 22.295697502896825 25.880869574964784 30.709175308707582 21.11425761343081 22 21.308887764248418 26.318787414304403 30.262165318551183 22.110159502895996 23 22.177665608960293 26.336390482552414 31.085939092553527 20.400004815933766 24 22.145573222743995 26.562863919563945 28.76187740044199 22.529685457250075 25 21.992791875685803 26.623395225001673 29.949918440501005 21.43389445881152 26 21.647995928044967 27.38883807709729 29.94672165688049 21.01644433797725 27 20.855857856884562 27.31647452059663 29.486343298856504 22.341324323662302 28 21.22963244046198 26.994097574969768 29.793566659788738 21.982703324779514 29 21.70396039973911 26.94473425386863 29.180116338013782 22.171189008378477 30 21.45822322766372 27.101210584592085 30.75621369626653 20.684352491477664 31 21.949489988462517 27.039641362394452 30.441517334662976 20.569351314480063 32 21.483548396605432 26.733082268188557 29.654029130586952 22.129340204619062 33 21.161628134352927 26.82500017644585 30.18303454477594 21.83033714442529 34 20.623156919313594 27.110053635386482 30.712994842384038 21.553794602915882 35 20.295714939898392 28.773585101493726 29.79638979337568 21.134310165232193 36 22.31226265438493 26.790292239994585 29.544964837456007 21.352480268164477 37 21.243291425022345 27.293142151833937 29.609149609888608 21.85441681325511 38 21.107241296133843 25.9935043017498 31.06019875690785 21.8390556452085 39 20.527087344016678 25.955931715041196 31.615650290139254 21.90133065080287 40 19.7258156053691 26.367444952008807 31.399805120749157 22.506934321872933 41 20.761448948403498 25.335382042628485 31.48997932884981 22.413189680118208 42 19.64261619789502 27.124003236639627 30.92120094442122 22.312179621044137 43 20.028887299261708 26.73914370206641 30.379408395750186 22.852560602921695 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 163.0 1 321.5 2 480.0 3 1069.5 4 1659.0 5 1659.0 6 2712.5 7 3766.0 8 4269.0 9 4772.0 10 7529.5 11 10287.0 12 10287.0 13 19908.0 14 29529.0 15 45578.0 16 61627.0 17 55774.5 18 49922.0 19 49922.0 20 53786.5 21 57651.0 22 46804.5 23 35958.0 24 40636.0 25 45314.0 26 45314.0 27 48833.0 28 52352.0 29 56601.0 30 60850.0 31 67961.5 32 75073.0 33 75073.0 34 84262.5 35 93452.0 36 101946.0 37 110440.0 38 117126.5 39 123813.0 40 123813.0 41 127227.0 42 130641.0 43 139044.0 44 147447.0 45 153981.5 46 160516.0 47 160516.0 48 200103.5 49 239691.0 50 225956.5 51 212222.0 52 194003.5 53 175785.0 54 175785.0 55 158463.5 56 141142.0 57 121854.5 58 102567.0 59 90804.0 60 79041.0 61 79041.0 62 70138.5 63 61236.0 64 53152.0 65 45068.0 66 38800.0 67 32532.0 68 32532.0 69 27785.5 70 23039.0 71 19577.0 72 16115.0 73 13290.5 74 10466.0 75 10466.0 76 8354.5 77 6243.0 78 4930.0 79 3617.0 80 2797.5 81 1978.0 82 1978.0 83 1516.0 84 1054.0 85 809.5 86 565.0 87 429.5 88 294.0 89 294.0 90 237.0 91 180.0 92 125.5 93 71.0 94 52.5 95 34.0 96 34.0 97 25.5 98 17.0 99 9.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2408671.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.02312293429656 #Duplication Level Percentage of deduplicated Percentage of total 1 80.77626633976074 40.40681101287332 2 11.162389422077872 11.167551566021857 3 3.3356172965394655 5.005739822596789 4 1.4290610056301298 2.859443774609818 5 0.7316321165581271 1.8299261654633385 6 0.45320121151198156 1.3602323950461594 7 0.3187647686193408 1.1161926445437518 8 0.22822928643838922 0.9133393322171459 9 0.17634466660213624 0.7939179842621581 >10 1.1657394654285016 11.378004681233257 >50 0.12321221671116553 4.271390454059378 >100 0.08787485911955262 8.64061294237951 >500 0.0070837451801774405 2.4288888911472792 >1k 0.004000232572335469 3.6135053154790167 >5k 2.500145357709668E-4 0.7067844474282265 >10k+ 3.3335271436128907E-4 3.5076585706388457 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29132 1.2094636419834837 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 24416 1.0136710243947804 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19314 0.8018529720331253 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11278 0.4682250087288799 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5998 0.24901698903669287 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5844 0.2426234217956707 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5112 0.2122332190656175 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4866 0.2020201181481406 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4703 0.19525290087355227 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4595 0.1907691004707575 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3135 0.1301547616922361 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3097 0.12857712821717868 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3061 0.12708252808291376 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2876 0.11940194405960797 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2589 0.10748665965588493 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2585 0.10732059297429994 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2569 0.10665632624795997 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 4.1516670396247555E-5 0.0 0.0 0.0 0.0 3 4.1516670396247555E-5 0.0 0.0 0.0 0.0 4 4.1516670396247555E-5 4.1516670396247555E-5 0.0 0.0 0.0 5 4.1516670396247555E-5 1.6606668158499022E-4 0.0 0.0 0.0 6 8.303334079249511E-5 1.6606668158499022E-4 0.0 0.0 0.0 7 8.303334079249511E-5 1.6606668158499022E-4 0.0 0.0 0.0 8 8.303334079249511E-5 1.6606668158499022E-4 0.0 0.0 0.0 9 8.303334079249511E-5 1.6606668158499022E-4 0.0 1.6606668158499022E-4 0.0 10 8.303334079249511E-5 1.6606668158499022E-4 0.0 4.1516670396247557E-4 0.0 11 8.303334079249511E-5 1.6606668158499022E-4 0.0 6.642667263399609E-4 0.0 12 8.303334079249511E-5 1.6606668158499022E-4 0.0 8.303334079249511E-4 0.0 13 8.303334079249511E-5 2.0758335198123778E-4 0.0 8.303334079249511E-4 0.0 14 8.303334079249511E-5 2.0758335198123778E-4 0.0 9.548834191136938E-4 0.0 15 8.303334079249511E-5 2.0758335198123778E-4 0.0 0.0012039834414911792 0.0 16 1.6606668158499022E-4 2.0758335198123778E-4 0.0 0.0021173501902086254 0.0 17 1.6606668158499022E-4 2.0758335198123778E-4 0.0 0.002906166927737329 0.0 18 1.6606668158499022E-4 2.906166927737329E-4 0.0 0.0030307169389260716 0.0 19 1.6606668158499022E-4 2.906166927737329E-4 0.0 0.004110150369228508 0.0 20 1.6606668158499022E-4 2.906166927737329E-4 0.0 0.006767217274588352 0.0 21 1.6606668158499022E-4 2.906166927737329E-4 0.0 0.011126467666194345 0.0 22 1.6606668158499022E-4 2.906166927737329E-4 0.0 0.01685576818087651 0.0 23 1.6606668158499022E-4 3.3213336316998044E-4 0.0 0.02005255180138757 0.0 24 1.6606668158499022E-4 3.3213336316998044E-4 0.0 0.02582336898646598 0.0 25 1.6606668158499022E-4 3.3213336316998044E-4 0.0 0.03126205280837441 0.0 26 1.6606668158499022E-4 3.3213336316998044E-4 0.0 0.041392120385058816 0.0 27 1.6606668158499022E-4 3.3213336316998044E-4 0.0 0.10549385947686504 0.0 28 1.6606668158499022E-4 3.3213336316998044E-4 0.0 0.2217405365863582 0.0 29 1.6606668158499022E-4 3.3213336316998044E-4 0.0 0.36758859968837587 0.0 30 1.6606668158499022E-4 3.7365003356622803E-4 0.0 0.5754210516919911 0.0 31 1.6606668158499022E-4 3.7365003356622803E-4 0.0 0.8180029568172656 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8490 0.0 21.921083 1 GTATTGG 825 0.0 21.303032 1 TCTAACG 85 1.246468E-6 19.588236 2 ATTGGAC 1060 0.0 17.103773 3 GTATACT 190 1.8189894E-12 16.552631 4 CTCTAAT 485 0.0 16.402061 1 CTAATAC 600 0.0 16.033333 3 TAGGTCG 140 3.4780896E-8 15.857143 21 CGGTATA 105 9.351525E-6 15.857142 28 TATACCG 105 9.351525E-6 15.857142 5 CTGTGCG 200 3.6379788E-12 15.724999 9 TTGGACC 1410 0.0 15.482269 4 TGGACCC 1300 0.0 15.36923 5 CGGGTAA 280 0.0 15.196429 26 GGACCCT 1315 0.0 15.193916 6 AATACTG 710 0.0 15.112676 5 TCGGGTA 270 0.0 15.074075 25 CATTGCG 150 8.112329E-8 14.8 29 GTCGTCA 165 1.6474587E-8 14.575757 24 GTTATAC 115 2.211722E-5 14.478261 3 >>END_MODULE