##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088490_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1807132 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.364471992084695 31.0 31.0 34.0 30.0 34.0 2 31.59352609549275 31.0 31.0 34.0 30.0 34.0 3 31.707480693164637 31.0 31.0 34.0 30.0 34.0 4 35.417265036533024 37.0 35.0 37.0 33.0 37.0 5 35.27634948636845 37.0 35.0 37.0 33.0 37.0 6 35.3281160424363 37.0 35.0 37.0 33.0 37.0 7 35.17334040900167 37.0 35.0 37.0 32.0 37.0 8 35.19912601846462 37.0 35.0 37.0 32.0 37.0 9 36.75176080109256 39.0 35.0 39.0 32.0 39.0 10 36.593313604097546 39.0 35.0 39.0 32.0 39.0 11 36.63455574910964 39.0 35.0 39.0 32.0 39.0 12 36.49089441169765 38.0 35.0 39.0 32.0 39.0 13 36.49802283397118 38.0 35.0 39.0 32.0 39.0 14 37.47239659305463 39.0 36.0 41.0 32.0 41.0 15 37.493471976590534 39.0 36.0 41.0 32.0 41.0 16 37.36100240602236 39.0 36.0 41.0 32.0 41.0 17 37.41252548236653 39.0 36.0 41.0 32.0 41.0 18 37.27539327509003 39.0 36.0 40.0 32.0 41.0 19 37.35672712341987 39.0 36.0 41.0 32.0 41.0 20 37.26165603840782 39.0 36.0 40.0 31.0 41.0 21 37.10736349087947 39.0 36.0 40.0 31.0 41.0 22 37.020443996343374 39.0 36.0 40.0 31.0 41.0 23 36.83014522458791 39.0 36.0 40.0 30.0 41.0 24 37.02828736362369 39.0 36.0 40.0 31.0 41.0 25 36.99329600715388 39.0 36.0 40.0 31.0 41.0 26 36.82497072709686 39.0 36.0 40.0 30.0 41.0 27 36.769139719732706 39.0 35.0 40.0 30.0 41.0 28 36.5905927181855 39.0 35.0 40.0 30.0 41.0 29 36.422827994855936 39.0 35.0 40.0 30.0 41.0 30 36.25899768251572 38.0 35.0 40.0 30.0 41.0 31 36.024308683593674 38.0 35.0 40.0 29.0 41.0 32 35.88024947817868 38.0 35.0 40.0 29.0 41.0 33 35.684550990187766 38.0 34.0 40.0 27.0 41.0 34 35.582145631863085 38.0 34.0 40.0 27.0 41.0 35 35.36295356398979 38.0 34.0 40.0 26.0 41.0 36 35.23688529670218 38.0 34.0 40.0 26.0 41.0 37 35.06887820037496 38.0 34.0 40.0 25.0 41.0 38 35.021546848819014 38.0 33.0 40.0 25.0 41.0 39 34.94857542227131 38.0 33.0 40.0 24.0 41.0 40 34.861318376300126 38.0 33.0 40.0 24.0 41.0 41 34.66818361912688 38.0 33.0 40.0 24.0 41.0 42 34.478808963595355 38.0 33.0 40.0 23.0 41.0 43 34.15748600544952 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 9.0 15 7.0 16 38.0 17 64.0 18 159.0 19 368.0 20 859.0 21 1597.0 22 2954.0 23 5048.0 24 8032.0 25 12109.0 26 17491.0 27 24340.0 28 33003.0 29 42826.0 30 54114.0 31 66998.0 32 82733.0 33 101356.0 34 123830.0 35 150757.0 36 188883.0 37 247513.0 38 323361.0 39 318680.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.271749933043075 21.47778911557097 13.202798688751017 24.047662262634937 2 19.0800118641029 23.399176153153174 34.601069540022536 22.919742442721393 3 19.33461418424332 25.10602435239927 32.19405112631507 23.36531033704234 4 13.780509669465207 16.636084137738692 36.93576340853906 32.647642784257044 5 12.548723612884945 38.71554485228528 35.311476970138315 13.424254564691458 6 32.19045426676081 38.183375647158044 14.110867385448323 15.515302700632827 7 26.374166358627924 32.54798210645376 22.103365996507172 18.97448553841114 8 26.894548931677377 34.56089538561655 19.346234807418604 19.19832087528747 9 25.06679091510747 14.237864195863944 21.204538462049257 39.490806426979326 10 16.184041896220087 27.50706644561659 34.03951675915207 22.26937489901125 11 33.75685893448846 22.72230252134321 23.253973699762938 20.26686484440539 12 20.944402511825366 27.140408116285915 30.95905556428639 20.956133807602324 13 30.727639154195707 21.161154802194858 25.798558157345454 22.31264788626398 14 20.702250859372754 22.66049187331086 27.473532647310765 29.16372462000562 15 23.175838842984355 29.56900768731891 24.87521664161777 22.379936828078968 16 22.424869904356736 28.301585053001112 26.031966674266183 23.24157836837597 17 22.120409577164256 27.05956178076643 26.872137729839324 23.947890912229987 18 22.765962862701784 26.22470301007342 28.860260346228166 22.149073780996627 19 23.037940781304297 25.541576376269138 29.528612187709584 21.89187065471698 20 23.546868740080967 25.386745406533667 29.329954867713038 21.736430985672325 21 22.679084870391318 25.979729206278236 29.62318192583608 21.71800399749437 22 21.94156265286653 26.352806546505736 29.250657948616926 22.45497285201081 23 22.539692728588726 26.463755829679293 29.855207035235942 21.14134440649604 24 22.595914410236773 26.713211873842084 27.893811852150257 22.79706186377088 25 22.55900509758003 26.384237565379838 28.993122804532263 22.063634532507866 26 22.29671103162359 27.058123036944725 29.010332394091854 21.63483353733983 27 21.71385377493177 27.09326158797476 28.535436260328524 22.65744837676495 28 21.883459536990106 26.797987086720838 28.82395973288061 22.49459364340845 29 22.349723207823224 26.84092805616856 28.364447090749316 22.444901645258895 30 22.124172445621017 26.928138066284035 29.581347682405045 21.3663418056899 31 22.467091501893606 26.802081972982606 29.464754096546354 21.266072428577438 32 21.955120046571032 26.605029405710262 28.752243886998848 22.687606660719858 33 21.898732356020478 26.61891881721977 29.20788298807171 22.274465838688045 34 21.463789031459793 26.850888590318807 29.644154383852424 22.04116799436898 35 21.134372032590868 28.341593198504594 28.84056062313102 21.683474145773523 36 22.864793495992544 26.739883970844406 28.537649712361908 21.857672820801135 37 21.8317754320105 27.053142769869602 28.702883906654304 22.412197891465592 38 21.77942729142088 26.09709750034862 29.808890551437305 22.314584656793198 39 21.342104505924304 25.995500052016123 30.354119123561535 22.30827631849804 40 20.60696174933541 26.53934521661948 30.141793737258816 22.71189929678629 41 21.44956760214528 25.360073309531344 30.369723960396914 22.82063512792646 42 20.48643928611745 26.927806048479024 29.959681971211843 22.62607269419168 43 20.86012532565413 26.311525666083053 29.5985019356638 23.229847072599014 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 98.0 1 186.5 2 275.0 3 618.5 4 962.0 5 962.0 6 1571.0 7 2180.0 8 2448.0 9 2716.0 10 4253.0 11 5790.0 12 5790.0 13 10965.0 14 16140.0 15 25231.0 16 34322.0 17 31874.5 18 29427.0 19 29427.0 20 31705.0 21 33983.0 22 28797.5 23 23612.0 24 27228.0 25 30844.0 26 30844.0 27 34886.5 28 38929.0 29 43196.5 30 47464.0 31 53790.0 32 60116.0 33 60116.0 34 67818.0 35 75520.0 36 83143.5 37 90767.0 38 95619.5 39 100472.0 40 100472.0 41 103160.0 42 105848.0 43 111435.5 44 117023.0 45 119862.0 46 122701.0 47 122701.0 48 143948.5 49 165196.0 50 158761.0 51 152326.0 52 141811.0 53 131296.0 54 131296.0 55 119677.0 56 108058.0 57 94439.5 58 80821.0 59 72994.5 60 65168.0 61 65168.0 62 57635.5 63 50103.0 64 43547.0 65 36991.0 66 31564.0 67 26137.0 68 26137.0 69 22508.0 70 18879.0 71 15861.5 72 12844.0 73 10628.0 74 8412.0 75 8412.0 76 6746.0 77 5080.0 78 4087.5 79 3095.0 80 2388.5 81 1682.0 82 1682.0 83 1289.5 84 897.0 85 678.0 86 459.0 87 355.0 88 251.0 89 251.0 90 203.5 91 156.0 92 106.5 93 57.0 94 41.5 95 26.0 96 26.0 97 16.5 98 7.0 99 4.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1807132.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.95041212535422 #Duplication Level Percentage of deduplicated Percentage of total 1 83.40687052697722 47.500556505974124 2 10.054732746263076 11.452423474199534 3 2.7583863106538953 4.71273711578024 4 1.1806692025279628 2.689583906707231 5 0.5989584177264304 1.705546436773514 6 0.35854340774024906 1.2251516901381658 7 0.2508296834608103 0.9999397692455706 8 0.17365906882315216 0.7911964431027013 9 0.13656764220631118 0.6999825155973607 >10 0.9142494210566562 10.174906691324558 >50 0.0916232316417347 3.60593039192542 >100 0.06644698539893515 7.359261819132552 >500 0.00554495706722157 2.0333396728703956 >1k 0.0025292786622414178 2.3971602175747684 >5k 9.727994854774685E-5 0.3461475199197382 >10k+ 2.918398456432405E-4 2.306135829734158 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16654 0.9215707541009732 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13614 0.7533483995635072 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11358 0.6285097048804404 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6248 0.34574120761516036 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3456 0.1912422556846982 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3269 0.18089436742861065 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3222 0.1782935612893801 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2814 0.15571635054882543 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2714 0.15018272046535616 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2579 0.14271231985267263 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.533630083469276E-5 0.0 3 0.0 0.0 0.0 5.533630083469276E-5 0.0 4 0.0 0.0 0.0 5.533630083469276E-5 0.0 5 0.0 0.0 0.0 5.533630083469276E-5 0.0 6 0.0 0.0 0.0 5.533630083469276E-5 0.0 7 0.0 0.0 0.0 1.1067260166938552E-4 0.0 8 0.0 0.0 0.0 1.660089025040783E-4 0.0 9 0.0 0.0 0.0 3.320178050081566E-4 0.0 10 1.1067260166938552E-4 0.0 0.0 3.873541058428493E-4 0.0 11 1.1067260166938552E-4 0.0 0.0 3.873541058428493E-4 0.0 12 1.1067260166938552E-4 0.0 0.0 6.086993091816204E-4 0.0 13 1.1067260166938552E-4 0.0 0.0 6.086993091816204E-4 0.0 14 1.1067260166938552E-4 0.0 0.0 6.086993091816204E-4 0.0 15 1.1067260166938552E-4 0.0 0.0 9.40717114189777E-4 0.0 16 1.660089025040783E-4 0.0 0.0 0.0012727349191979335 0.0 17 1.660089025040783E-4 0.0 0.0 0.001881434228379554 0.0 18 1.660089025040783E-4 0.0 0.0 0.002047443130883632 0.0 19 2.2134520333877105E-4 0.0 0.0 0.0023241246350570958 0.0 20 2.2134520333877105E-4 0.0 0.0 0.003984213660097879 0.0 21 2.766815041734638E-4 0.0 0.0 0.006086993091816204 0.0 22 2.766815041734638E-4 0.0 0.0 0.011177932768607938 0.0 23 2.766815041734638E-4 0.0 0.0 0.013336048501160956 0.0 24 2.766815041734638E-4 0.0 0.0 0.017375598462093526 0.0 25 2.766815041734638E-4 0.0 0.0 0.021138466918852634 0.0 26 2.766815041734638E-4 0.0 0.0 0.027391468913172918 0.0 27 2.766815041734638E-4 0.0 0.0 0.07143916437758835 0.0 28 2.766815041734638E-4 0.0 0.0 0.16362944156818648 0.0 29 2.766815041734638E-4 0.0 0.0 0.2769028493768026 0.0 30 2.766815041734638E-4 0.0 0.0 0.42514879931294447 0.0 31 2.766815041734638E-4 0.0 0.0 0.6010075633655981 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4940 0.0 21.758099 1 CTAATAC 470 0.0 20.468086 3 CTCTAAT 415 0.0 18.72289 1 TAATACT 530 0.0 18.150944 4 TTAACGG 290 0.0 17.862068 35 GTATTGG 565 0.0 16.371681 1 TCTAATA 465 0.0 16.311827 2 GTCTAGA 115 1.243081E-6 16.086956 1 GTATTAG 515 0.0 15.805824 1 ATGCGTA 95 7.06325E-5 15.578948 7 ATACTGG 525 0.0 15.504762 6 CCGTTTA 275 0.0 15.472727 27 ATGCTAG 450 0.0 15.211111 15 AATACTG 625 0.0 15.096 5 ACCGTTA 320 0.0 15.03125 8 CGCTAGA 75 0.004105615 14.8 1 TACTGGT 550 0.0 14.799999 7 ATTAGAG 445 0.0 14.550561 3 GACCGTT 325 0.0 14.230769 7 GATGCTA 495 0.0 14.202021 14 >>END_MODULE