##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088485_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3107702 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38146579047798 31.0 31.0 34.0 30.0 34.0 2 31.605832541215342 31.0 31.0 34.0 30.0 34.0 3 31.715153512144987 31.0 31.0 34.0 30.0 34.0 4 35.413291557556036 37.0 35.0 37.0 33.0 37.0 5 35.289005187756096 37.0 35.0 37.0 33.0 37.0 6 35.34872133814632 37.0 35.0 37.0 33.0 37.0 7 35.18929324626364 37.0 35.0 37.0 32.0 37.0 8 35.23633089659176 37.0 35.0 37.0 32.0 37.0 9 36.774584564414475 39.0 37.0 39.0 32.0 39.0 10 36.62470243285875 39.0 35.0 39.0 32.0 39.0 11 36.66992105420661 39.0 35.0 39.0 32.0 39.0 12 36.52170414022966 38.0 35.0 39.0 32.0 39.0 13 36.53530325623242 38.0 35.0 39.0 32.0 39.0 14 37.499368343554174 39.0 36.0 41.0 32.0 41.0 15 37.52744729063469 39.0 36.0 41.0 32.0 41.0 16 37.397983139953574 39.0 36.0 41.0 32.0 41.0 17 37.465629265611696 39.0 36.0 41.0 32.0 41.0 18 37.34135930665167 39.0 36.0 41.0 32.0 41.0 19 37.42757349321138 39.0 36.0 41.0 32.0 41.0 20 37.34360694815655 39.0 36.0 41.0 31.0 41.0 21 37.19000148662903 39.0 36.0 40.0 31.0 41.0 22 37.0990210773105 39.0 36.0 40.0 31.0 41.0 23 36.91296816747552 39.0 36.0 40.0 31.0 41.0 24 37.10143829749442 39.0 36.0 40.0 31.0 41.0 25 37.0608179291322 39.0 36.0 41.0 31.0 41.0 26 36.90419416018653 39.0 36.0 40.0 31.0 41.0 27 36.84253573862616 39.0 35.0 40.0 30.0 41.0 28 36.66452703637607 39.0 35.0 40.0 30.0 41.0 29 36.50118254581681 39.0 35.0 40.0 30.0 41.0 30 36.32041778780591 38.0 35.0 40.0 30.0 41.0 31 36.06689122702241 38.0 35.0 40.0 29.0 41.0 32 35.92691287645984 38.0 35.0 40.0 29.0 41.0 33 35.726797485730614 38.0 34.0 40.0 28.0 41.0 34 35.625061540649654 38.0 34.0 40.0 27.0 41.0 35 35.39586002776328 38.0 34.0 40.0 27.0 41.0 36 35.25713211884537 38.0 34.0 40.0 26.0 41.0 37 35.09795565984126 38.0 34.0 40.0 25.0 41.0 38 35.033811478706774 38.0 34.0 40.0 25.0 41.0 39 34.9492731285046 38.0 33.0 40.0 24.0 41.0 40 34.83429942768 38.0 33.0 40.0 24.0 41.0 41 34.62036964934218 38.0 33.0 40.0 23.0 41.0 42 34.411229905570096 38.0 33.0 40.0 23.0 41.0 43 34.09091058280363 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 7.0 14 7.0 15 24.0 16 43.0 17 99.0 18 270.0 19 606.0 20 1256.0 21 2512.0 22 4832.0 23 8355.0 24 13184.0 25 20372.0 26 29474.0 27 41461.0 28 55792.0 29 72609.0 30 92371.0 31 114657.0 32 140028.0 33 172317.0 34 210355.0 35 257765.0 36 325976.0 37 432564.0 38 557966.0 39 552797.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.217948181646754 21.590133159485692 13.65967521982481 23.53224343904274 2 19.071294480616224 23.52181772898431 34.85491852178877 22.551969268610698 3 19.499746114653206 24.865833339232655 32.65300212182506 22.981418424289075 4 13.722293836410312 16.420203738968535 36.68987567018974 33.16762675443141 5 12.336671920280645 38.76053752901662 35.33816948986743 13.564621060835305 6 32.198132253349904 37.78309503292143 13.621898109921737 16.39687460380693 7 26.21081429300493 32.80414273955482 21.661536402138946 19.323506565301308 8 27.015556832669287 34.41308079088664 19.008096657916365 19.56326571852771 9 24.591032216087644 14.267873818017302 21.644964671644836 39.496129294250224 10 16.266714118663888 27.520238426979166 33.883396799307015 22.32965065504994 11 33.322757458726734 22.461967074063086 23.59415413704403 20.621121330166147 12 21.050795732666774 27.235494265537685 30.871364114062416 20.84234588773312 13 31.26715495887315 20.96565243385627 26.17397034850832 21.593222258762264 14 20.52310678436993 22.868537588224353 27.60351539497674 29.00484023242898 15 22.679716394943917 29.670637660882544 25.37051493354253 22.279131010631005 16 22.087510321131177 28.413149008495665 26.363242035433252 23.1360986349399 17 21.823488867336703 26.91860416474939 26.893183451952602 24.364723515961312 18 22.889292473988817 25.87838216148138 29.320604099106028 21.911721265423775 19 22.82654514493346 24.928291065230837 30.260044238475892 21.985119551359816 20 23.68843602121439 24.68331905697522 30.11984418068399 21.5084007411264 21 22.697253468961954 25.532467398740287 30.504694465556863 21.265584666740892 22 21.431623752856613 25.987562514037705 30.102693244075525 22.478120489030157 23 22.410996935999655 26.0926240675586 31.028682930345315 20.467696066096426 24 22.37717773454469 26.124673472553035 28.47792355895128 23.020225233951003 25 22.25313109171986 26.258309194382218 29.80819911304237 21.680360600855554 26 22.098547415421425 26.918250205457277 29.66342976257054 21.31977261655075 27 21.08133276614038 27.014720201615212 29.22838161445338 22.675565417791024 28 21.516220023670225 26.50363516192994 29.596016606482863 22.384128207916977 29 22.048671333351784 26.497650032081584 28.87664261245126 22.577036022115376 30 21.807979014718914 26.617223916578876 30.498226663946543 21.076570404755667 31 22.442853272289298 26.5537686689393 30.18529447160635 20.818083587165052 32 21.929998436143492 26.239774598722786 29.27983442427878 22.550392540854947 33 21.638722116856766 26.314910503001897 30.044611742052485 22.001755638088852 34 21.059129865090025 26.823678718229736 30.43029865797943 21.6868927587008 35 20.595121411255004 28.796808703022364 29.361566842638066 21.24650304308457 36 22.84022084485578 26.589261132502408 29.134743292632304 21.435774730009506 37 21.755399970782268 27.17667266681297 29.13374577099091 21.934181591413846 38 21.547271907023262 25.86467428344159 30.48545195131322 22.102601858221927 39 21.127830145876278 25.772580511258802 31.082999592625033 22.016589750239888 40 20.135328290807806 26.39255630044322 30.729941287806874 22.7421741209421 41 21.42805198181808 25.248527690235424 30.827634052428447 22.49578627551805 42 20.204897380765594 27.060091347239855 30.368001822568573 22.367009449425975 43 20.60911889235197 26.690718736867307 29.666004011967683 23.034158358813038 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 154.0 1 320.5 2 487.0 3 1189.5 4 1892.0 5 1892.0 6 3043.0 7 4194.0 8 4726.5 9 5259.0 10 8171.0 11 11083.0 12 11083.0 13 21292.0 14 31501.0 15 50245.5 16 68990.0 17 63334.5 18 57679.0 19 57679.0 20 61791.5 21 65904.0 22 53357.5 23 40811.0 24 46105.0 25 51399.0 26 51399.0 27 57253.0 28 63107.0 29 69740.5 30 76374.0 31 86094.0 32 95814.0 33 95814.0 34 108559.5 35 121305.0 36 133878.5 37 146452.0 38 156055.0 39 165658.0 40 165658.0 41 171506.0 42 177354.0 43 187540.0 44 197726.0 45 204915.5 46 212105.0 47 212105.0 48 264690.0 49 317275.0 50 299780.0 51 282285.0 52 259626.5 53 236968.0 54 236968.0 55 211700.5 56 186433.0 57 159179.0 58 131925.0 59 117397.5 60 102870.0 61 102870.0 62 90577.5 63 78285.0 64 68345.0 65 58405.0 66 49324.0 67 40243.0 68 40243.0 69 34423.0 70 28603.0 71 23848.5 72 19094.0 73 15821.0 74 12548.0 75 12548.0 76 10119.5 77 7691.0 78 6163.0 79 4635.0 80 3569.5 81 2504.0 82 2504.0 83 1909.5 84 1315.0 85 981.5 86 648.0 87 509.5 88 371.0 89 371.0 90 290.5 91 210.0 92 146.5 93 83.0 94 64.0 95 45.0 96 45.0 97 28.5 98 12.0 99 9.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3107702.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.75829799800507 #Duplication Level Percentage of deduplicated Percentage of total 1 79.96243272947797 39.78794556398799 2 11.579866918481153 11.523889378140519 3 3.627167423742165 5.414450326776569 4 1.5486708005425365 3.0823689277681843 5 0.8055269906946071 2.004082602420926 6 0.47659428021927963 1.4228712131577388 7 0.32148441580022574 1.1197562154171539 8 0.21177974232450084 0.8430239622818593 9 0.1656772128676449 0.7419434516412475 >10 1.0899539034816623 10.457689198271487 >50 0.11871350414942622 4.073766207681387 >100 0.0788193219494027 7.80783651347599 >500 0.008052594036164375 2.7964468167249814 >1k 0.004610759488402862 4.201779123621517 >5k 3.896416469072841E-4 1.4723821456625474 >10k+ 2.597610979381894E-4 3.2497683529699355 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34262 1.1024866605614052 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 29775 0.9581034474991489 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 23945 0.770505022682355 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12589 0.40509032075791046 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9044 0.29101889434701267 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8242 0.2652120441406544 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7799 0.25095713810397524 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7422 0.23882598781993897 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6874 0.22119237944950962 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6185 0.19902165651661582 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4530 0.14576687211322062 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3802 0.12234120259921961 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3755 0.12082883107839813 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3730 0.12002437814179094 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3686 0.1186085409733623 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3247 0.10448234740654026 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.217811746428712E-5 0.0 3 0.0 0.0 0.0 3.217811746428712E-5 0.0 4 0.0 0.0 0.0 3.217811746428712E-5 0.0 5 0.0 0.0 0.0 3.217811746428712E-5 0.0 6 0.0 0.0 0.0 3.217811746428712E-5 3.217811746428712E-5 7 0.0 0.0 0.0 3.217811746428712E-5 3.217811746428712E-5 8 6.435623492857424E-5 0.0 0.0 3.217811746428712E-5 3.217811746428712E-5 9 6.435623492857424E-5 0.0 0.0 4.5049364450001965E-4 3.217811746428712E-5 10 9.653435239286135E-5 0.0 0.0 5.148498794285939E-4 3.217811746428712E-5 11 9.653435239286135E-5 0.0 0.0 7.079185842143166E-4 3.217811746428712E-5 12 9.653435239286135E-5 0.0 0.0 8.688091715357522E-4 3.217811746428712E-5 13 9.653435239286135E-5 0.0 0.0 9.975216413929005E-4 3.217811746428712E-5 14 9.653435239286135E-5 0.0 0.0 0.0012227684636429105 3.217811746428712E-5 15 9.653435239286135E-5 0.0 0.0 0.0015123715208214944 3.217811746428712E-5 16 9.653435239286135E-5 0.0 0.0 0.001930687047857227 6.435623492857424E-5 17 9.653435239286135E-5 0.0 0.0 0.0024133588098215336 6.435623492857424E-5 18 9.653435239286135E-5 0.0 0.0 0.0026064275146072562 6.435623492857424E-5 19 1.2871246985714848E-4 0.0 0.0 0.003024743041642989 6.435623492857424E-5 20 1.6089058732143559E-4 0.0 0.0 0.005438101851464523 6.435623492857424E-5 21 1.6089058732143559E-4 0.0 0.0 0.008977694772536106 1.2871246985714848E-4 22 1.930687047857227E-4 0.0 0.0 0.014673221563714926 1.2871246985714848E-4 23 1.930687047857227E-4 0.0 0.0 0.018051923897465072 1.2871246985714848E-4 24 1.930687047857227E-4 0.0 0.0 0.023296957044143873 1.2871246985714848E-4 25 1.930687047857227E-4 0.0 0.0 0.027093974904929752 1.2871246985714848E-4 26 2.2524682225000982E-4 0.0 0.0 0.03278950169610857 1.2871246985714848E-4 27 2.2524682225000982E-4 0.0 0.0 0.08186113082914642 1.2871246985714848E-4 28 2.2524682225000982E-4 0.0 0.0 0.17903904557129352 1.2871246985714848E-4 29 2.2524682225000982E-4 0.0 0.0 0.2974545178398701 1.2871246985714848E-4 30 2.2524682225000982E-4 0.0 0.0 0.4633005352508059 1.2871246985714848E-4 31 2.2524682225000982E-4 3.217811746428712E-5 0.0 0.6520251941788499 1.2871246985714848E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9250 0.0 25.04 1 GTATTGG 1250 0.0 18.352001 1 ACCGTTA 425 0.0 16.541178 8 ATTGGAC 1425 0.0 16.357895 3 GTATCAA 14600 0.0 15.82637 2 TTGGACC 1820 0.0 15.552198 4 GTCGGGT 300 0.0 15.416667 24 TATACTG 360 0.0 15.416666 5 TGGACCC 1835 0.0 15.2234335 5 CTAATAC 815 0.0 14.981595 3 GGACCCT 1885 0.0 14.819629 6 TCGGGTA 315 0.0 14.68254 25 TATACCG 165 1.6481863E-8 14.575757 5 GTATTAG 755 0.0 14.456954 1 GGACCGT 555 0.0 14.0 6 CCGTTAT 480 0.0 13.875001 9 TAGCGAA 415 0.0 13.819277 10 CGGGTAA 340 0.0 13.602941 26 CCGAGTT 410 0.0 13.536585 13 CGTTTAC 465 0.0 13.526881 28 >>END_MODULE