##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088483_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1637998 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33602910382064 31.0 31.0 34.0 30.0 34.0 2 31.56411179989231 31.0 31.0 34.0 30.0 34.0 3 31.675477625735805 31.0 31.0 34.0 30.0 34.0 4 35.388585334048024 37.0 35.0 37.0 33.0 37.0 5 35.25343986988995 37.0 35.0 37.0 33.0 37.0 6 35.306113316377676 37.0 35.0 37.0 33.0 37.0 7 35.14952826560228 37.0 35.0 37.0 32.0 37.0 8 35.18699961782615 37.0 35.0 37.0 32.0 37.0 9 36.73200394628076 39.0 35.0 39.0 32.0 39.0 10 36.56724122984277 38.0 35.0 39.0 32.0 39.0 11 36.61008621500148 38.0 35.0 39.0 32.0 39.0 12 36.46234671837206 38.0 35.0 39.0 32.0 39.0 13 36.480046373682995 38.0 35.0 39.0 32.0 39.0 14 37.445096392059085 39.0 36.0 41.0 32.0 41.0 15 37.45684915366197 39.0 36.0 41.0 32.0 41.0 16 37.32788928924211 39.0 36.0 41.0 32.0 41.0 17 37.38567202157756 39.0 36.0 41.0 32.0 41.0 18 37.25381838073062 39.0 36.0 40.0 31.0 41.0 19 37.340632284044304 39.0 36.0 40.0 31.0 41.0 20 37.25037149007508 39.0 36.0 40.0 31.0 41.0 21 37.087939667814005 39.0 36.0 40.0 31.0 41.0 22 37.00166300569354 39.0 36.0 40.0 31.0 41.0 23 36.81181723054607 39.0 36.0 40.0 30.0 41.0 24 37.005600739439245 39.0 36.0 40.0 31.0 41.0 25 36.963944400420516 39.0 36.0 40.0 31.0 41.0 26 36.79668900694629 39.0 36.0 40.0 30.0 41.0 27 36.73835621288915 39.0 35.0 40.0 30.0 41.0 28 36.55815269615714 39.0 35.0 40.0 30.0 41.0 29 36.38615309664603 39.0 35.0 40.0 30.0 41.0 30 36.213373276402045 38.0 35.0 40.0 30.0 41.0 31 35.9690237717018 38.0 35.0 40.0 29.0 41.0 32 35.82260601050795 38.0 34.0 40.0 28.0 41.0 33 35.628096615502585 38.0 34.0 40.0 27.0 41.0 34 35.52546889556642 38.0 34.0 40.0 27.0 41.0 35 35.31751442919955 38.0 34.0 40.0 26.0 41.0 36 35.17936163536219 38.0 34.0 40.0 25.0 41.0 37 35.01533396255673 38.0 33.0 40.0 25.0 41.0 38 34.959081757120586 38.0 33.0 40.0 25.0 41.0 39 34.86643878686055 38.0 33.0 40.0 24.0 41.0 40 34.76809678644296 38.0 33.0 40.0 24.0 41.0 41 34.57219789035152 38.0 33.0 40.0 23.0 41.0 42 34.37279227447164 38.0 33.0 40.0 23.0 41.0 43 34.048486628188805 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 8.0 15 6.0 16 24.0 17 72.0 18 130.0 19 359.0 20 725.0 21 1471.0 22 2622.0 23 4502.0 24 7427.0 25 11073.0 26 16123.0 27 22274.0 28 30166.0 29 39359.0 30 49995.0 31 61849.0 32 76088.0 33 92971.0 34 113328.0 35 138321.0 36 172153.0 37 226380.0 38 291819.0 39 278749.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.15566685673609 21.568341353286147 13.479808888655542 23.796182901322226 2 19.355762339148157 23.510101965936467 34.348637788324524 22.78549790659085 3 19.573161871992518 24.846550484188626 32.4228723111994 23.157415332619454 4 13.972727683428184 16.65209603430529 36.6579202172408 32.717256065025715 5 12.507890730025311 38.82300222588794 35.168724259736585 13.500382784350165 6 32.27647408604894 37.924771580917685 13.857892378378972 15.9408619546544 7 26.35583193630273 32.69875787394124 21.79611940918121 19.149290780574823 8 27.05326868530975 34.473180064932926 19.070902406474243 19.402648843283078 9 24.98214283533924 14.247758544271727 21.307046772950883 39.46305184743815 10 16.362107890241624 27.505711240184667 33.81719635799311 22.314984511580597 11 33.71341112748611 22.551553787000962 23.318953991396814 20.41608109411611 12 21.037632524581838 27.18391597547738 30.822504056781508 20.95594744315927 13 30.916521265593733 21.134702240173674 25.90979964566501 22.038976848567582 14 20.741539366958932 22.776828787336736 27.35894671422065 29.122685131483678 15 23.102164959908375 29.60339389913785 25.001312577915236 22.29312856303854 16 22.359306910020646 28.30693321969868 26.149116177187032 23.184643693093644 17 22.05344573070297 27.10216984391922 26.79612551419477 24.048258911183044 18 22.803324546183816 26.21346302010137 28.887275808639572 22.095936625075243 19 23.08562037316285 25.308516860215946 29.702661419611015 21.903201347010192 20 23.682019147764528 25.170360403370456 29.544846819104787 21.602773629760232 21 22.72804972899845 25.9258558313258 29.874883852117033 21.471210587558716 22 21.78549668558814 26.336479043319954 29.48526188676665 22.392762384325255 23 22.577316944220932 26.39221781711577 30.180195580214388 20.850269658448912 24 22.574813888661645 26.57964173338429 27.9627936053646 22.882750772589468 25 22.423104301714655 26.485929775250032 29.202599758974063 21.888366164061253 26 22.17994161165032 27.138006273511934 29.15009664236464 21.531955472473104 27 21.50252930711759 27.13263386157981 28.64930238010059 22.715534451202014 28 21.802834924096366 26.866455270397154 28.988985334536427 22.34172447097005 29 22.305582790699376 26.80345153046585 28.401866180544786 22.489099498289985 30 22.030063528771095 26.902230649854275 29.77634893327098 21.29135688810365 31 22.446486503646522 26.86920252649881 29.628729705408674 21.055581264445987 32 22.00814653009344 26.593500114163753 28.830804433216645 22.567548922526157 33 21.74245633999553 26.71260892870443 29.36651937303953 22.178415358260512 34 21.300270207900134 26.859190304261666 29.948876616454967 21.89166287138324 35 21.006985356514477 28.48147555735721 28.928545700300003 21.58299338582831 36 22.78983246621791 26.607053244265256 28.748753050980525 21.85436123853631 37 21.77988007311364 27.056076991546995 28.919266079689965 22.244776855649395 38 21.663945865623766 25.88843209820769 30.14478650157082 22.302835534597722 39 21.1576570911564 25.941850966851 30.655592986072023 22.24489895592058 40 20.436716039946326 26.403023691115617 30.380562125228476 22.779698143709577 41 21.27481230135812 25.312607219300638 30.617497701462394 22.79508277787885 42 20.27145332289783 26.862792262261614 30.172503263129748 22.693251151710808 43 20.638975139163783 26.385197051522653 29.782148696152255 23.193679113161313 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 96.0 1 188.0 2 280.0 3 585.0 4 890.0 5 890.0 6 1450.5 7 2011.0 8 2345.5 9 2680.0 10 4173.0 11 5666.0 12 5666.0 13 10784.5 14 15903.0 15 24762.0 16 33621.0 17 30740.5 18 27860.0 19 27860.0 20 30228.0 21 32596.0 22 27208.0 23 21820.0 24 24728.5 25 27637.0 26 27637.0 27 31055.0 28 34473.0 29 38111.0 30 41749.0 31 46795.0 32 51841.0 33 51841.0 34 58815.0 35 65789.0 36 72497.5 37 79206.0 38 84638.0 39 90070.0 40 90070.0 41 92739.5 42 95409.0 43 101110.5 44 106812.0 45 109091.5 46 111371.0 47 111371.0 48 133441.5 49 155512.0 50 147697.0 51 139882.0 52 129516.0 53 119150.0 54 119150.0 55 107729.5 56 96309.0 57 84125.5 58 71942.0 59 64964.0 60 57986.0 61 57986.0 62 51364.5 63 44743.0 64 39439.0 65 34135.0 66 29017.0 67 23899.0 68 23899.0 69 20529.0 70 17159.0 71 14427.0 72 11695.0 73 9507.5 74 7320.0 75 7320.0 76 6002.5 77 4685.0 78 3656.0 79 2627.0 80 2078.5 81 1530.0 82 1530.0 83 1152.0 84 774.0 85 605.0 86 436.0 87 338.5 88 241.0 89 241.0 90 181.5 91 122.0 92 80.0 93 38.0 94 28.0 95 18.0 96 18.0 97 14.5 98 11.0 99 7.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1637998.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.28171819992741 #Duplication Level Percentage of deduplicated Percentage of total 1 83.45530673664594 46.97008056040411 2 9.953674876161067 11.20419848867589 3 2.7378222919224826 4.622680281463817 4 1.156088754134954 2.602666458973146 5 0.6034261047933351 1.6980928992229176 6 0.3764791760174972 1.271333693565459 7 0.25927174170677525 1.0214581372761564 8 0.19611758951318514 0.8830267925624101 9 0.14326135592806352 0.7256695736954495 >10 0.9488561389294962 10.269198541213335 >50 0.09403694038660579 3.6931759246203906 >100 0.0665141440513904 7.3746903613771595 >500 0.006313817725416542 2.374122372761986 >1k 0.0023948963786062745 2.431959057146175 >5k 1.0885892630028521E-4 0.3793694382488314 >10k+ 3.2657677890085557E-4 2.4782774187928345 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16197 0.9888290461893114 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13500 0.8241768304967405 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10753 0.6564721080245519 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6192 0.3780224395878383 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3604 0.22002468867483357 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3269 0.19957289325139593 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3224 0.19682563714974013 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3092 0.18876701925154976 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2772 0.1692309758619974 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2618 0.15982925498077533 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1806 0.11025654487978617 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1712 0.10451783213410518 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1662 0.10146532535448761 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 6.105013559235116E-5 0.0 4 0.0 0.0 0.0 6.105013559235116E-5 0.0 5 0.0 0.0 0.0 6.105013559235116E-5 0.0 6 6.105013559235116E-5 0.0 0.0 6.105013559235116E-5 0.0 7 6.105013559235116E-5 0.0 0.0 1.221002711847023E-4 0.0 8 1.221002711847023E-4 0.0 0.0 1.221002711847023E-4 0.0 9 1.221002711847023E-4 0.0 0.0 4.2735094914645805E-4 0.0 10 1.221002711847023E-4 0.0 0.0 6.105013559235115E-4 0.0 11 1.221002711847023E-4 0.0 0.0 6.105013559235115E-4 0.0 12 1.221002711847023E-4 0.0 0.0 6.715514915158627E-4 0.0 13 1.221002711847023E-4 0.0 0.0 8.547018982929161E-4 0.0 14 1.8315040677705345E-4 0.0 0.0 9.157520338852672E-4 0.0 15 1.8315040677705345E-4 0.0 0.0 0.0010989024406623208 0.0 16 2.442005423694046E-4 0.0 0.0 0.001221002711847023 0.0 17 2.442005423694046E-4 0.0 0.0 0.0018315040677705345 0.0 18 2.442005423694046E-4 0.0 0.0 0.0020757046101399393 0.0 19 2.442005423694046E-4 0.0 0.0 0.0025641056948787484 0.0 20 2.442005423694046E-4 0.0 0.0 0.004212459355872229 0.0 21 2.442005423694046E-4 0.0 0.0 0.007020765593120383 0.0 22 2.442005423694046E-4 0.0 0.0 0.012271077254062582 0.0 23 2.442005423694046E-4 0.0 0.0 0.014468882135387223 0.0 24 2.442005423694046E-4 0.0 0.0 0.018925542033628857 0.0 25 2.442005423694046E-4 0.0 0.0 0.022588550169169927 0.0 26 2.442005423694046E-4 0.0 0.0 0.030402967524990873 0.0 27 2.442005423694046E-4 0.0 0.0 0.0819903321005276 0.0 28 2.442005423694046E-4 0.0 0.0 0.17527493928564014 0.0 29 2.442005423694046E-4 0.0 0.0 0.2948111047754637 0.0 30 2.442005423694046E-4 0.0 0.0 0.4660567351120087 0.0 31 2.442005423694046E-4 0.0 0.0 0.6573268099228449 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4550 0.0 23.175825 1 TCGGTTC 50 2.7027822E-4 22.199999 13 CGTTGAC 100 2.8767863E-7 18.499998 32 GTATTAG 415 0.0 17.831326 1 ATACTGG 500 0.0 17.39 6 GTATTGG 535 0.0 16.943924 1 CTAATAC 555 0.0 16.666666 3 TATACTG 170 8.54925E-11 16.32353 5 ATTAGAG 320 0.0 16.1875 3 ATGCTAG 445 0.0 15.382023 15 TAATACT 555 0.0 15.333333 4 TGTTACG 220 1.8189894E-12 15.136364 16 AATACTG 600 0.0 15.108334 5 TTATGCG 235 0.0 14.957447 4 CGTTATT 225 1.8189894E-12 14.8 10 ACCGTTA 275 0.0 14.8 8 TAACGTA 100 1.09381464E-4 14.799999 23 TACTGGT 540 0.0 14.731482 7 GTATCAA 7190 0.0 14.640473 2 GTATACT 140 5.998827E-7 14.535714 4 >>END_MODULE