##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088482_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 452308 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.432470794237556 31.0 31.0 34.0 30.0 34.0 2 31.63242525005085 31.0 31.0 34.0 30.0 34.0 3 31.740707659382544 31.0 31.0 34.0 30.0 34.0 4 35.42459120776108 37.0 35.0 37.0 33.0 37.0 5 35.320531584672395 37.0 35.0 37.0 33.0 37.0 6 35.38130212156318 37.0 35.0 37.0 33.0 37.0 7 35.20721941685754 37.0 35.0 37.0 32.0 37.0 8 35.257110199244764 37.0 35.0 37.0 32.0 37.0 9 36.803361868461316 39.0 37.0 39.0 32.0 39.0 10 36.65443458882001 39.0 35.0 39.0 32.0 39.0 11 36.681971134713514 39.0 35.0 39.0 32.0 39.0 12 36.528997939457184 38.0 35.0 39.0 32.0 39.0 13 36.54605047887723 38.0 35.0 39.0 32.0 39.0 14 37.50033826507601 39.0 36.0 41.0 32.0 41.0 15 37.537120723047124 39.0 36.0 41.0 32.0 41.0 16 37.392414018765976 39.0 36.0 41.0 32.0 41.0 17 37.46360444652759 39.0 36.0 41.0 32.0 41.0 18 37.33841983780963 39.0 36.0 41.0 32.0 41.0 19 37.426804301493675 39.0 36.0 41.0 32.0 41.0 20 37.32790487897627 39.0 36.0 41.0 31.0 41.0 21 37.16457369756891 39.0 36.0 40.0 31.0 41.0 22 37.065725125357055 39.0 36.0 40.0 31.0 41.0 23 36.86733155283568 39.0 36.0 40.0 30.0 41.0 24 37.06492920753115 39.0 36.0 40.0 31.0 41.0 25 37.030658312477335 39.0 36.0 41.0 31.0 41.0 26 36.84058208123668 39.0 36.0 40.0 30.0 41.0 27 36.791288237218886 39.0 35.0 40.0 30.0 41.0 28 36.592439222830464 39.0 35.0 40.0 30.0 41.0 29 36.417171484917354 39.0 35.0 40.0 30.0 41.0 30 36.24199439320109 38.0 35.0 40.0 30.0 41.0 31 35.93922061957781 38.0 35.0 40.0 29.0 41.0 32 35.786824464745266 38.0 34.0 40.0 28.0 41.0 33 35.55117088355722 38.0 34.0 40.0 27.0 41.0 34 35.43578048586362 38.0 34.0 40.0 27.0 41.0 35 35.185621302298436 38.0 34.0 40.0 26.0 41.0 36 35.02308824959983 38.0 34.0 40.0 25.0 41.0 37 34.85879533415283 38.0 33.0 40.0 25.0 41.0 38 34.76304863057916 38.0 33.0 40.0 24.0 41.0 39 34.6583279535184 38.0 33.0 40.0 24.0 41.0 40 34.508438939837454 38.0 33.0 40.0 23.0 41.0 41 34.28015644207045 38.0 33.0 40.0 22.0 41.0 42 34.031774808316456 38.0 33.0 40.0 21.0 41.0 43 33.68869221857672 37.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 2.0 15 5.0 16 3.0 17 19.0 18 32.0 19 89.0 20 211.0 21 401.0 22 769.0 23 1298.0 24 2108.0 25 3192.0 26 4681.0 27 6355.0 28 8538.0 29 11025.0 30 13852.0 31 16932.0 32 21077.0 33 25306.0 34 30862.0 35 37220.0 36 47205.0 37 63280.0 38 79420.0 39 78424.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.41337318818151 21.41483237086233 13.761640298203877 23.410154142752283 2 19.38590517965634 23.685630145829833 34.51961937440859 22.408845300105238 3 19.71775869540225 24.783112392440547 32.604552649964184 22.89457626219302 4 13.907779654571664 16.53320303863739 36.19148898538164 33.36752832140931 5 12.39907319790939 38.926351070509476 34.97174491718033 13.702830814400807 6 32.250590305720884 37.48772960018395 13.50517788763409 16.756502206461086 7 25.97256736560043 32.986372118114204 21.524934336779364 19.516126179506 8 27.35547458811253 34.32506168363151 18.788082457086762 19.531381271169206 9 24.789523952704794 14.37493920072163 21.485801710338972 39.34973513623461 10 16.842063372746004 27.510236387594293 33.06375301785509 22.583947221804614 11 33.31623583929535 22.596549254048128 23.188402592923406 20.89881231373312 12 21.027485695587963 27.538535688070958 30.64438391538509 20.789594700955984 13 31.504417343933778 21.149968605463535 25.957091185652253 21.38852286495043 14 20.58641456706492 23.160103292446742 27.386869124578826 28.866613015909515 15 22.95847077655049 29.663857371525598 25.34998275511377 22.02768909681014 16 22.01376053485678 28.34506575165595 26.412533052698606 23.228640660788667 17 21.911175570628863 26.93540684666201 26.737311743325343 24.416105839383782 18 22.88131096509458 25.84101983604093 29.21615359445334 22.061515604411152 19 23.00534149296497 25.041122421005156 30.266322948079626 21.687213137950245 20 23.729847802824626 24.727619232912087 30.02489454088807 21.51763842337522 21 22.7139471333693 25.56443839153851 30.51504726867533 21.206567206416864 22 21.47563164923017 25.919727265491655 30.094758438939838 22.509882646338337 23 22.261600502312582 26.189676061444857 31.02023399984082 20.528489436401745 24 22.34539296231771 26.242737249838605 28.683994092521026 22.727875695322656 25 22.18311416114683 26.336920859237512 29.716697471634372 21.763267507981286 26 21.940801400815374 27.11669924034065 29.63091521706448 21.3115841417795 27 21.19285973274848 27.134165214853596 29.219469918727945 22.453505133669978 28 21.399798367484106 26.665458050708807 29.57741185210078 22.357331729706306 29 21.845291261706627 26.71763488596266 28.919674204303263 22.51739964802745 30 21.64830159979483 26.721835563377166 30.56722410392918 21.062638732898822 31 22.12739991333339 26.649539694190683 30.49669694102249 20.726363451453434 32 21.77233212766522 26.431546645206367 29.376000424489508 22.42012080263891 33 21.47342076638043 26.452107855708938 30.01715645091398 22.05731492699665 34 20.922689848510306 26.884998717687946 30.444520105768635 21.747791328033113 35 20.6443396977281 28.65503152718944 29.4516126179506 21.249016157131866 36 22.634355350778673 26.644454663636285 29.177905321152842 21.543284664432203 37 21.530461543903712 27.216631145148877 29.197140001945577 22.05576730900183 38 21.35093785650486 25.90425108554348 30.662292066467984 22.08251899148368 39 20.880019809510333 25.873740902217072 31.318924272840633 21.92731501543196 40 19.933098684966883 26.293587555382615 31.006305437887455 22.767008321763047 41 21.1044244187589 25.272822943657864 31.112648902959926 22.51010373462331 42 20.05889791911706 26.997090478169746 30.504877207566526 22.43913439514667 43 20.358472545256774 26.657277784164773 29.871017094546193 23.11323257603226 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 28.0 1 59.0 2 90.0 3 194.0 4 298.0 5 298.0 6 499.5 7 701.0 8 794.0 9 887.0 10 1403.5 11 1920.0 12 1920.0 13 3612.0 14 5304.0 15 8326.5 16 11349.0 17 10198.0 18 9047.0 19 9047.0 20 9646.5 21 10246.0 22 8120.5 23 5995.0 24 6765.0 25 7535.0 26 7535.0 27 8315.0 28 9095.0 29 9906.0 30 10717.0 31 11958.0 32 13199.0 33 13199.0 34 14765.5 35 16332.0 36 18109.0 37 19886.0 38 21267.5 39 22649.0 40 22649.0 41 23574.5 42 24500.0 43 26280.0 44 28060.0 45 29211.0 46 30362.0 47 30362.0 48 38544.5 49 46727.0 50 44173.5 51 41620.0 52 38403.5 53 35187.0 54 35187.0 55 31122.0 56 27057.0 57 23505.0 58 19953.0 59 17602.5 60 15252.0 61 15252.0 62 13365.5 63 11479.0 64 10077.0 65 8675.0 66 7423.0 67 6171.0 68 6171.0 69 5299.0 70 4427.0 71 3663.5 72 2900.0 73 2417.0 74 1934.0 75 1934.0 76 1584.0 77 1234.0 78 963.0 79 692.0 80 546.0 81 400.0 82 400.0 83 299.5 84 199.0 85 150.5 86 102.0 87 77.5 88 53.0 89 53.0 90 43.0 91 33.0 92 20.5 93 8.0 94 6.0 95 4.0 96 4.0 97 2.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 452308.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.45177776161699 #Duplication Level Percentage of deduplicated Percentage of total 1 88.29917872743644 56.027398651465965 2 6.6344580406249145 8.4193631432501 3 1.7579118772900775 3.3462790128695072 4 0.8836787399216678 2.242839480727016 5 0.5086501450329093 1.6137377980521204 6 0.3504470365131392 1.3341892486829388 7 0.24671359703933882 1.0958091431076478 8 0.19610102812239907 0.9954367084197656 9 0.14138107295553126 0.8073792378785993 >10 0.8580576686125212 10.297565095806391 >50 0.07796918081194655 3.3954335578106654 >100 0.03950904674790082 4.609625509371295 >500 0.003496375818398302 1.5136911565328879 >1k 0.0020978254910389814 3.0846199385070014 >5k 3.4963758183983025E-4 1.2166323175181528 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5484 1.2124481547971737 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4726 1.0448632347869151 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3736 0.825985832662699 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2065 0.4565473084712187 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1162 0.25690458713973663 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1154 0.255135880859945 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1061 0.23457467035736712 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 996 0.22020393183405998 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 987 0.21821413726929437 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 931 0.20583319331075284 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 636 0.1406121492434359 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 601 0.13287405926934742 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 577 0.1275679404299725 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 546 0.12071420359577986 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 519 0.11474481990148305 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 517 0.11430264333153516 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 513 0.11341829019163932 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 4.421765699479116E-4 0.0 10 4.421765699479116E-4 0.0 0.0 6.632648549218673E-4 0.0 11 4.421765699479116E-4 0.0 0.0 0.0013265297098437347 0.0 12 4.421765699479116E-4 0.0 0.0 0.002431971134713514 0.0 13 4.421765699479116E-4 0.0 0.0 0.0026530594196874694 0.0 14 4.421765699479116E-4 0.0 0.0 0.0026530594196874694 0.0 15 4.421765699479116E-4 0.0 0.0 0.0037585008445572485 0.0 16 4.421765699479116E-4 0.0 0.0 0.00420067741450516 0.0 17 4.421765699479116E-4 0.0 0.0 0.006632648549218674 0.0 18 4.421765699479116E-4 0.0 0.0 0.007295913404140542 0.0 19 6.632648549218673E-4 0.0 0.0 0.00795917825906241 0.0 20 6.632648549218673E-4 0.0 0.0 0.011275502533671745 0.0 21 6.632648549218673E-4 0.0 0.0 0.015697268233150864 0.0 22 6.632648549218673E-4 0.0 0.0 0.02365644649221327 0.0 23 6.632648549218673E-4 0.0 0.0 0.028520388761640297 0.0 24 6.632648549218673E-4 0.0 0.0 0.03537412559583293 0.0 25 6.632648549218673E-4 0.0 0.0 0.038911538155416224 0.0 26 6.632648549218673E-4 0.0 0.0 0.05107139382898379 0.0 27 6.632648549218673E-4 0.0 0.0 0.10965978934708208 0.0 28 6.632648549218673E-4 0.0 0.0 0.21202366529002362 0.0 29 6.632648549218673E-4 0.0 0.0 0.3577208450878605 0.0 30 6.632648549218673E-4 0.0 0.0 0.5595744492690822 0.0 31 6.632648549218673E-4 0.0 0.0 0.7775674982534025 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGAG 25 0.005492863 29.6 3 TAGTACT 85 6.91216E-11 26.117645 4 TATACCG 45 1.3214794E-4 24.666666 5 GGTATCA 1680 0.0 24.22619 1 AGGTTAC 40 0.0019293865 23.125 34 ATACCGC 40 0.0019293865 23.125 6 CGGTTGG 60 3.7198566E-5 21.583334 33 AAGACTA 45 0.0038222747 20.555555 5 ATTGTAC 45 0.0038222747 20.555555 3 CGGGAAC 55 5.1364687E-4 20.181818 6 TCGGGTA 65 6.890307E-5 19.923077 25 TTGGACC 270 0.0 19.87037 4 TGTGACG 75 9.24541E-6 19.733334 10 CGGGTAA 70 1.2171241E-4 18.5 26 AGTCAAT 60 9.225011E-4 18.5 27 TCGTCTT 50 0.007028447 18.5 14 GTACTAT 60 9.225011E-4 18.5 1 TATACTT 90 2.1463493E-6 18.5 5 ATTTCGG 70 1.2171241E-4 18.5 29 TGGACCC 305 0.0 18.19672 5 >>END_MODULE