##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088481_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1323010 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.392730213679414 31.0 31.0 34.0 30.0 34.0 2 31.585356119757222 31.0 31.0 34.0 30.0 34.0 3 31.705293232855382 31.0 31.0 34.0 30.0 34.0 4 35.40351849192372 37.0 35.0 37.0 33.0 37.0 5 35.2731407925866 37.0 35.0 37.0 33.0 37.0 6 35.32364683562483 37.0 35.0 37.0 33.0 37.0 7 35.16072969969993 37.0 35.0 37.0 32.0 37.0 8 35.199703705943264 37.0 35.0 37.0 32.0 37.0 9 36.7419936357246 39.0 35.0 39.0 32.0 39.0 10 36.58604999206355 39.0 35.0 39.0 32.0 39.0 11 36.61762193785383 39.0 35.0 39.0 32.0 39.0 12 36.46562384260134 38.0 35.0 39.0 32.0 39.0 13 36.48398424804045 38.0 35.0 39.0 32.0 39.0 14 37.44871391750629 39.0 36.0 41.0 32.0 41.0 15 37.48241736645981 39.0 36.0 41.0 32.0 41.0 16 37.34819540290701 39.0 36.0 41.0 32.0 41.0 17 37.392439966440165 39.0 36.0 41.0 32.0 41.0 18 37.261192281237484 39.0 36.0 40.0 31.0 41.0 19 37.33060143158404 39.0 36.0 41.0 31.0 41.0 20 37.22467630630154 39.0 36.0 40.0 31.0 41.0 21 37.06216733055684 39.0 36.0 40.0 31.0 41.0 22 36.964136325500185 39.0 36.0 40.0 31.0 41.0 23 36.762467403874496 39.0 35.0 40.0 30.0 41.0 24 36.978674386436985 39.0 36.0 40.0 31.0 41.0 25 36.940017082259395 39.0 36.0 40.0 30.0 41.0 26 36.76738573404585 39.0 36.0 40.0 30.0 41.0 27 36.706936455506764 39.0 35.0 40.0 30.0 41.0 28 36.51623721664991 39.0 35.0 40.0 30.0 41.0 29 36.347151571038765 39.0 35.0 40.0 30.0 41.0 30 36.182842155388094 38.0 35.0 40.0 30.0 41.0 31 35.90723350541568 38.0 35.0 40.0 28.0 41.0 32 35.76312423942374 38.0 34.0 40.0 27.0 41.0 33 35.551355620894775 38.0 34.0 40.0 27.0 41.0 34 35.43886214011988 38.0 34.0 40.0 27.0 41.0 35 35.206078563276165 38.0 34.0 40.0 26.0 41.0 36 35.0631000521538 38.0 34.0 40.0 25.0 41.0 37 34.90039833410178 38.0 33.0 40.0 25.0 41.0 38 34.830155478794566 38.0 33.0 40.0 24.0 41.0 39 34.73260292817137 38.0 33.0 40.0 24.0 41.0 40 34.62288266906524 38.0 33.0 40.0 24.0 41.0 41 34.420457895254 38.0 33.0 40.0 23.0 41.0 42 34.210262205123165 38.0 33.0 40.0 22.0 41.0 43 33.87191782375039 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 0.0 14 4.0 15 10.0 16 22.0 17 47.0 18 128.0 19 294.0 20 642.0 21 1371.0 22 2493.0 23 4058.0 24 6483.0 25 9812.0 26 14005.0 27 18975.0 28 25419.0 29 32856.0 30 40953.0 31 50093.0 32 61051.0 33 74368.0 34 90048.0 35 108695.0 36 136949.0 37 179712.0 38 233998.0 39 230521.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.34148645890809 21.35645233218192 13.446005699125479 23.856055509784508 2 19.348455416058837 23.535800938768414 34.389989493654625 22.725754151518128 3 19.616934112364987 24.959750871119642 32.13943961118964 23.283875405325734 4 14.129296074859601 16.705240323202393 36.15739865911822 33.00806494281978 5 12.746540086620662 38.64989682617667 34.84100649277027 13.762556594432393 6 32.570124186514086 37.664416746661026 13.736857620123807 16.02860144670108 7 26.398515506307586 32.6352786449082 21.72099984127104 19.245206007513172 8 27.117633275636617 34.5137224964286 19.044451667031996 19.32419256090279 9 25.11711929615045 14.200270595082426 21.1209287911656 39.56168131760153 10 16.407812488189812 27.635089681861814 33.611386157323075 22.345711672625303 11 33.845851505279626 22.567025192553345 23.03058933794907 20.55653396421796 12 21.06869940514433 27.15376301010574 30.764166559587608 21.01337102516232 13 31.15698294041617 21.164012365741755 25.681589708316643 21.99741498552543 14 20.771120399694638 22.687130104836697 27.27326324064066 29.26848625482801 15 23.049334472150626 29.60809064179409 24.844558998042345 22.49801588801294 16 22.40391229091239 28.32246165939789 25.897914603820077 23.375711445869644 17 22.162115176756032 27.028367132523563 26.7280670592059 24.0814506315145 18 23.136559814362702 25.974784771090164 28.627977112795822 22.26067830175131 19 23.11637856100861 25.34379936659587 29.519353595210923 22.0204684771846 20 23.870643456965556 25.083257118237956 29.266596624364137 21.779502800432347 21 23.0132047376815 25.776222401947074 29.57324585604039 21.637327004331034 22 21.99613003681 26.161782601794393 29.262439437343634 22.579647924051972 23 22.725300640206804 26.271834680009974 29.878761309438328 21.124103370344898 24 22.640871951081245 26.470699390027285 27.913167700924408 22.97526095796706 25 22.672164231562874 26.34613494984921 28.91361365371388 22.068087164874036 26 22.402249416104187 26.954066862684336 28.969319959788663 21.674363761422814 27 21.670811256150746 27.024134360284503 28.4946447872654 22.810409596299348 28 21.88222311244813 26.702065744023102 28.794642519708844 22.621068623819927 29 22.277760561144664 26.73713728543246 28.366225500941034 22.61887665248184 30 22.186680372786295 26.792843591507243 29.625021730750333 21.395454304956125 31 22.551605807968194 26.58846116053545 29.493956961776558 21.365976069719807 32 22.19877400775504 26.46412347601303 28.65979848980733 22.67730402642459 33 22.032184186060576 26.338652013212293 29.23613578128661 22.39302801944052 34 21.4218335462317 26.62474206544168 29.702043068457535 22.251381319869086 35 21.197421032342913 28.16887249529482 28.93220761747833 21.701498854883937 36 22.931497116423913 26.406225198600165 28.68315432234072 21.979123362635203 37 21.87458900537411 26.889895012131426 28.772873976765105 22.46264200572936 38 21.816161631431356 25.74266256490881 29.96303882812677 22.478136975533065 39 21.227277193672005 25.6176446134194 30.635671688044685 22.51940650486391 40 20.565528605225964 26.047497751339748 30.43007989357601 22.956893749858278 41 21.452067633653563 25.113717961315484 30.518136673192192 22.91607773183876 42 20.44678422687659 26.679919274986585 30.08646949002653 22.786827008110293 43 20.728263580774144 26.346361705504872 29.5960725920439 23.329302121677085 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 80.0 1 154.5 2 229.0 3 519.0 4 809.0 5 809.0 6 1254.0 7 1699.0 8 1940.0 9 2181.0 10 3512.5 11 4844.0 12 4844.0 13 8895.5 14 12947.0 15 20199.0 16 27451.0 17 25164.5 18 22878.0 19 22878.0 20 24685.0 21 26492.0 22 22003.0 23 17514.0 24 20000.0 25 22486.0 26 22486.0 27 25111.5 28 27737.0 29 30496.0 30 33255.0 31 37210.5 32 41166.0 33 41166.0 34 46020.5 35 50875.0 36 55665.0 37 60455.0 38 64652.0 39 68849.0 40 68849.0 41 71230.5 42 73612.0 43 77952.5 44 82293.0 45 85523.5 46 88754.0 47 88754.0 48 107218.0 49 125682.0 50 119930.0 51 114178.0 52 106046.0 53 97914.0 54 97914.0 55 89153.0 56 80392.0 57 70627.0 58 60862.0 59 54711.5 60 48561.0 61 48561.0 62 43326.5 63 38092.0 64 33299.5 65 28507.0 66 24548.0 67 20589.0 68 20589.0 69 17682.5 70 14776.0 71 12663.5 72 10551.0 73 8663.5 74 6776.0 75 6776.0 76 5484.0 77 4192.0 78 3330.0 79 2468.0 80 1979.0 81 1490.0 82 1490.0 83 1085.0 84 680.0 85 534.5 86 389.0 87 272.0 88 155.0 89 155.0 90 123.0 91 91.0 92 65.5 93 40.0 94 25.0 95 10.0 96 10.0 97 9.0 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1323010.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.031524832718894 #Duplication Level Percentage of deduplicated Percentage of total 1 85.11920768406085 51.09835829827056 2 8.988656372559124 10.792054964841201 3 2.3839704160625317 4.2934013769697525 4 1.0130509437577422 2.432599715480089 5 0.5570036325080606 1.6718888698411138 6 0.3637721921524621 1.3102679631991874 7 0.23614833358499254 0.9923441186268867 8 0.1716942317705669 0.8245653230535505 9 0.13876193435587042 0.749708145730849 >10 0.8878361170592236 10.129723670937004 >50 0.08053464946988445 3.384992493296813 >100 0.0531876923902616 5.995754107677627 >500 0.00403317568556188 1.6571442393237392 >1k 0.0017645143624333225 2.1625649095220125 >5k 1.2603674017380874E-4 0.678988786580734 >10k+ 2.520734803476175E-4 1.8256430166488222 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13076 0.988352317820727 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11053 0.8354434206846509 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8974 0.6783017513095139 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4920 0.3718792752889245 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2691 0.20339982313058858 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2667 0.20158577788527676 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2472 0.18684666026711816 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2374 0.17943930884876153 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2249 0.16999115652942912 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2108 0.15933364071322212 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1464 0.11065675996402144 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1339 0.101208607644689 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 7.558521855465945E-5 0.0 3 0.0 0.0 0.0 7.558521855465945E-5 0.0 4 0.0 0.0 0.0 7.558521855465945E-5 0.0 5 0.0 0.0 0.0 7.558521855465945E-5 0.0 6 0.0 0.0 0.0 7.558521855465945E-5 0.0 7 0.0 0.0 0.0 7.558521855465945E-5 0.0 8 0.0 0.0 0.0 7.558521855465945E-5 0.0 9 0.0 0.0 0.0 2.2675565566397836E-4 0.0 10 7.558521855465945E-5 0.0 0.0 2.2675565566397836E-4 0.0 11 7.558521855465945E-5 0.0 0.0 2.2675565566397836E-4 0.0 12 7.558521855465945E-5 0.0 0.0 8.31437404101254E-4 0.0 13 7.558521855465945E-5 0.0 0.0 9.070226226559134E-4 0.0 14 7.558521855465945E-5 0.0 0.0 9.82607841210573E-4 0.0 15 7.558521855465945E-5 0.0 0.0 0.0011337782783198917 0.0 16 7.558521855465945E-5 0.0 0.0 0.0015872895896478485 0.0 17 7.558521855465945E-5 0.0 0.0 0.0024187269937491025 0.0 18 1.511704371093189E-4 0.0 0.0 0.002872238305077059 0.0 19 1.511704371093189E-4 0.0 0.0 0.0037792609277329725 0.0 20 1.511704371093189E-4 0.0 0.0 0.006197987921482075 0.0 21 1.511704371093189E-4 0.0 0.0 0.010052834067769707 0.0 22 1.511704371093189E-4 0.0 0.0 0.014739117618158593 0.0 23 1.511704371093189E-4 0.0 0.0 0.018593963764446227 0.0 24 1.511704371093189E-4 0.0 0.0 0.024036099500381707 0.0 25 1.511704371093189E-4 0.0 0.0 0.029780576110535823 0.0 26 2.2675565566397836E-4 0.0 0.0 0.03869963189998564 0.0 27 2.2675565566397836E-4 0.0 0.0 0.09130694401402861 0.0 28 2.2675565566397836E-4 0.0 0.0 0.19727742042766117 0.0 29 2.2675565566397836E-4 0.0 0.0 0.3235047354139424 0.0 30 2.2675565566397836E-4 0.0 0.0 0.5046825042894612 0.0 31 2.2675565566397836E-4 0.0 0.0 0.7171525536466089 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3780 0.0 22.708996 1 GTATTGG 515 0.0 21.553398 1 TTGGACC 665 0.0 19.75188 4 ATTGGAC 615 0.0 18.349594 3 TGGACCC 665 0.0 18.082706 5 GGACCCT 720 0.0 17.472223 6 TATTAGA 325 0.0 17.076923 2 GTTAGGC 80 3.3830493E-4 16.1875 3 ACCGTTA 220 0.0 15.977273 8 GTACACG 70 0.0025927713 15.857142 4 CGGTATA 70 0.0025927713 15.857142 26 TAATACT 400 0.0 15.725 4 AATACTG 415 0.0 15.602409 5 TTAACGG 230 0.0 15.282609 35 ATTAGAG 305 0.0 15.163935 3 CAGATCG 125 2.9593775E-6 14.800001 9 GTATCAA 5825 0.0 14.7047205 2 CTAATAC 365 0.0 14.69863 3 CGGGTAA 90 8.2751765E-4 14.388889 26 CATACAC 180 3.3305696E-9 14.388889 3 >>END_MODULE