##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088480_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2309593 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.396016527587328 31.0 31.0 34.0 30.0 34.0 2 31.587582314286543 31.0 31.0 34.0 30.0 34.0 3 31.694503317251133 31.0 31.0 34.0 30.0 34.0 4 35.39229032994125 37.0 35.0 37.0 33.0 37.0 5 35.27009867106455 37.0 35.0 37.0 33.0 37.0 6 35.33131898130969 37.0 35.0 37.0 33.0 37.0 7 35.157924361565 37.0 35.0 37.0 32.0 37.0 8 35.209775488581755 37.0 35.0 37.0 32.0 37.0 9 36.746436709844545 39.0 35.0 39.0 32.0 39.0 10 36.59209782849186 39.0 35.0 39.0 32.0 39.0 11 36.630004940264364 39.0 35.0 39.0 32.0 39.0 12 36.477323493793065 38.0 35.0 39.0 32.0 39.0 13 36.497466436727166 38.0 35.0 39.0 32.0 39.0 14 37.44203199438169 39.0 36.0 41.0 32.0 41.0 15 37.471518574917745 39.0 36.0 41.0 32.0 41.0 16 37.33256119151729 39.0 36.0 41.0 32.0 41.0 17 37.40552642824948 39.0 36.0 41.0 32.0 41.0 18 37.28573692421132 39.0 36.0 41.0 32.0 41.0 19 37.36702267455781 39.0 36.0 41.0 32.0 41.0 20 37.26748349168014 39.0 36.0 41.0 31.0 41.0 21 37.11235789162853 39.0 36.0 40.0 31.0 41.0 22 37.01409599007271 39.0 36.0 40.0 31.0 41.0 23 36.811324765878666 39.0 35.0 40.0 30.0 41.0 24 37.0084776841634 39.0 36.0 40.0 31.0 41.0 25 36.963277945508146 39.0 36.0 41.0 31.0 41.0 26 36.787303217493296 39.0 36.0 40.0 30.0 41.0 27 36.726153915430125 39.0 35.0 40.0 30.0 41.0 28 36.52956083604341 39.0 35.0 40.0 30.0 41.0 29 36.356577544182024 39.0 35.0 40.0 30.0 41.0 30 36.18043612013026 38.0 35.0 40.0 30.0 41.0 31 35.888882586672196 38.0 35.0 40.0 29.0 41.0 32 35.75174890121333 38.0 34.0 40.0 28.0 41.0 33 35.54040170714061 38.0 34.0 40.0 27.0 41.0 34 35.4160217839247 38.0 34.0 40.0 27.0 41.0 35 35.17559803826908 38.0 34.0 40.0 26.0 41.0 36 35.0235573973423 38.0 33.0 40.0 25.0 41.0 37 34.85732204765082 38.0 33.0 40.0 25.0 41.0 38 34.765931053653176 38.0 33.0 40.0 24.0 41.0 39 34.65697116331752 38.0 33.0 40.0 24.0 41.0 40 34.5306748851421 38.0 33.0 40.0 23.0 41.0 41 34.30274987844179 38.0 33.0 40.0 22.0 41.0 42 34.06598911583123 38.0 33.0 40.0 21.0 41.0 43 33.727601356602655 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 3.0 14 13.0 15 18.0 16 31.0 17 98.0 18 225.0 19 550.0 20 1140.0 21 2248.0 22 4153.0 23 7054.0 24 11255.0 25 16869.0 26 24226.0 27 33159.0 28 44654.0 29 57854.0 30 72008.0 31 88208.0 32 107445.0 33 130303.0 34 157264.0 35 190398.0 36 239321.0 37 317050.0 38 404244.0 39 399799.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.52441577368827 21.336183474750747 13.693668105159654 23.445732646401336 2 19.382592517382932 23.68018953988863 34.48196283934009 22.455255103388346 3 19.63895803286553 24.88273908000241 32.54993412259216 22.9283687645399 4 13.958346773652327 16.534558253337277 36.26755882962929 33.2395361433811 5 12.481116802830629 38.826624431230954 34.89562879693522 13.796629969003197 6 32.2802329241559 37.595022153253844 13.495191577044094 16.629553345546164 7 26.112739344118207 32.917098380537176 21.50283621399961 19.46732606134501 8 27.24055710248516 34.327390150559 18.82136809385896 19.61068465309689 9 24.79856840577539 14.235798255363608 21.524311859275638 39.44132147958536 10 16.764642081959895 27.530391718367696 33.119082020078864 22.585884179593545 11 33.54586717226801 22.621994437981062 23.089609294797828 20.742529094953095 12 21.216725197902832 27.39430713549963 30.57789835698324 20.81106930961429 13 31.37868879928195 21.128701030874268 25.879884464492232 21.612725705351547 14 20.735817955804333 23.084413574166533 27.434400779704475 28.74536769032466 15 23.01738877802279 29.544296332730486 25.33814399333562 22.1001708959111 16 22.194949499760348 28.28450727032858 26.258306117138385 23.26223711277268 17 22.009722059254596 26.90950310292766 26.789698444704324 24.29107639311342 18 22.96906857615173 25.754277918230617 29.103699223196465 22.17295428242119 19 23.055187645615483 25.002890119601158 30.13344775464768 21.80847448013568 20 23.748729754549828 24.751936813109495 30.000870283205742 21.498463149134935 21 22.693911871052606 25.461369167641223 30.41791345921121 21.426805502094957 22 21.593631432031533 25.98492461658829 29.961642592439446 22.45980135894073 23 22.403904064482358 26.14395696557792 30.87760484206525 20.57453412787448 24 22.48707889225504 26.25644431724551 28.430550317739968 22.825926472759487 25 22.28535503874492 26.275148911518176 29.64258204800586 21.79691400173104 26 22.028166867495703 27.04099813257141 29.597465873857427 21.33336912607546 27 21.28288404060802 27.046237150874635 29.105257939385858 22.565620869131486 28 21.532971393661136 26.67734098605252 29.40085114563475 22.388836474651594 29 22.076183985663274 26.653050992101207 28.871623701665182 22.399141320570333 30 21.871299402102448 26.749041930764424 30.415965063974475 20.96369360315865 31 22.299340186777496 26.544547026250946 30.285682369144695 20.870430417826864 32 21.843372403709225 26.348711656122966 29.34252918154844 22.465386758619378 33 21.48841808924776 26.46371027276234 30.00368463188103 22.044187006108867 34 20.97711588145617 26.830181767956518 30.440125164910008 21.752577185677303 35 20.684466916898344 28.594258815297763 29.368464487033 21.352809780770897 36 22.719457497489817 26.508826446910778 29.15124006697284 21.620475988626566 37 21.577221614371016 27.06481185213152 29.282561905928876 22.075404627568577 38 21.376320416627518 25.76640126637031 30.653799175872116 22.20347914113006 39 20.870949989889994 25.81337924041162 31.2358497795932 22.079820990105183 40 20.094319648526817 26.353301209347276 30.88319024174389 22.669188900382014 41 21.137403862931695 25.140879800034032 31.066036310293633 22.655680026740644 42 20.006771755889456 26.95855936522149 30.557375260489618 22.477293618399433 43 20.305568989860983 26.486614741211977 29.994722013792043 23.213094255134994 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 173.0 1 297.0 2 421.0 3 970.5 4 1520.0 5 1520.0 6 2484.5 7 3449.0 8 3970.0 9 4491.0 10 7070.0 11 9649.0 12 9649.0 13 18088.5 14 26528.0 15 41526.0 16 56524.0 17 51284.5 18 46045.0 19 46045.0 20 49203.0 21 52361.0 22 41584.0 23 30807.0 24 34504.0 25 38201.0 26 38201.0 27 42101.5 28 46002.0 29 50482.5 30 54963.0 31 61096.0 32 67229.0 33 67229.0 34 75634.5 35 84040.0 36 92903.0 37 101766.0 38 109188.0 39 116610.0 40 116610.0 41 120884.0 42 125158.0 43 134242.0 44 143326.0 45 149173.5 46 155021.0 47 155021.0 48 194269.0 49 233517.0 50 222011.0 51 210505.0 52 193457.5 53 176410.0 54 176410.0 55 158176.0 56 139942.0 57 121020.5 58 102099.0 59 90867.5 60 79636.0 61 79636.0 62 70437.5 63 61239.0 64 53243.5 65 45248.0 66 38825.5 67 32403.0 68 32403.0 69 27874.0 70 23345.0 71 19684.0 72 16023.0 73 13230.0 74 10437.0 75 10437.0 76 8430.5 77 6424.0 78 5082.5 79 3741.0 80 2916.5 81 2092.0 82 2092.0 83 1590.5 84 1089.0 85 848.5 86 608.0 87 449.5 88 291.0 89 291.0 90 218.0 91 145.0 92 103.5 93 62.0 94 50.5 95 39.0 96 39.0 97 24.5 98 10.0 99 7.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2309593.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.28494576398399 #Duplication Level Percentage of deduplicated Percentage of total 1 80.66745985548305 39.75691383895838 2 11.1133493706233 10.9544164197475 3 3.4029956537634845 5.031493686924198 4 1.464804418591518 2.8877122530050827 5 0.7639814012439204 1.8826390962499557 6 0.4465759968433153 1.320568427035193 7 0.32070209912365333 1.106404989319355 8 0.23401213053995956 0.9226620129420998 9 0.16569746514510053 0.7349751524615317 >10 1.18167779566542 11.37245570271934 >50 0.13235408944266405 4.474007144635536 >100 0.09360147805322815 8.975551279163483 >500 0.00811392127102322 2.801997594157119 >1k 0.004145155431935772 3.831507747541405 >5k 1.7638959284833075E-4 0.4887402222779366 >10k+ 3.527791856966615E-4 3.4579544328618788 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27404 1.1865294015006107 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23266 1.0073636350647062 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18649 0.8074582837755396 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10235 0.4431516721777387 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5735 0.2483121485040871 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5509 0.23852687464847702 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4869 0.210816364614891 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4866 0.21068647159910858 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4684 0.20280629530830757 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4432 0.19189528198258307 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3003 0.13002290879821685 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2860 0.12383134171258746 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2667 0.11547489103058417 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2623 0.11356979346577513 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2612 0.11309351907457287 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2606 0.112833733043008 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2456 0.1063390822538863 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.329767192747813E-5 0.0 3 0.0 0.0 0.0 4.329767192747813E-5 0.0 4 0.0 0.0 0.0 4.329767192747813E-5 0.0 5 4.329767192747813E-5 0.0 0.0 4.329767192747813E-5 0.0 6 8.659534385495626E-5 0.0 0.0 4.329767192747813E-5 0.0 7 8.659534385495626E-5 0.0 0.0 4.329767192747813E-5 0.0 8 8.659534385495626E-5 0.0 0.0 8.659534385495626E-5 0.0 9 8.659534385495626E-5 0.0 0.0 1.7319068770991252E-4 0.0 10 2.1648835963739065E-4 0.0 0.0 3.030837034923469E-4 0.0 11 2.1648835963739065E-4 0.0 0.0 5.628697350572157E-4 0.0 12 2.1648835963739065E-4 0.0 0.0 6.927627508396501E-4 0.0 13 2.1648835963739065E-4 0.0 0.0 7.360604227671282E-4 0.0 14 2.597860315648688E-4 0.0 0.0 8.226557666220845E-4 0.0 15 3.030837034923469E-4 0.0 0.0 9.525487824045189E-4 0.0 16 3.4638137541982504E-4 0.0 0.0 0.0015587161893892128 0.0 17 3.896790473473032E-4 0.0 0.0 0.002251478940228863 0.0 18 3.896790473473032E-4 0.0 0.0 0.002641157987576166 0.0 19 4.7627439120225944E-4 0.0 0.0 0.0037235997857631192 0.0 20 4.7627439120225944E-4 0.0 0.0 0.005282315975152332 0.0 21 4.7627439120225944E-4 0.0 0.0 0.009135808776697885 0.0 22 4.7627439120225944E-4 0.0 4.329767192747813E-5 0.014331529407995262 0.0 23 4.7627439120225944E-4 0.0 4.329767192747813E-5 0.018011831521830904 0.0 24 4.7627439120225944E-4 0.0 4.329767192747813E-5 0.023294147496983234 0.0 25 4.7627439120225944E-4 0.0 4.329767192747813E-5 0.027537319345876093 0.0 26 5.195720631297376E-4 0.0 4.329767192747813E-5 0.03719270018570371 0.0 27 5.195720631297376E-4 0.0 4.329767192747813E-5 0.10144644532608126 0.0 28 5.195720631297376E-4 0.0 4.329767192747813E-5 0.21518942947956632 0.0 29 5.195720631297376E-4 0.0 4.329767192747813E-5 0.3637004441908163 0.0 30 5.195720631297376E-4 0.0 4.329767192747813E-5 0.5659871674359941 0.0 31 5.195720631297376E-4 0.0 4.329767192747813E-5 0.795897805370903 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7845 0.0 22.214148 1 ACGCCTA 85 2.7250444E-5 17.411764 6 GTATTGG 1060 0.0 17.103773 1 CTCTAAT 560 0.0 16.517857 1 ATCGTAC 70 0.0025935567 15.857142 25 TCTAACG 120 1.937462E-6 15.416666 2 CTAATAC 675 0.0 15.348147 3 TCTAATA 635 0.0 15.149607 2 TAATACT 710 0.0 15.112676 4 ATACTGG 680 0.0 14.963235 6 ACCTCTA 390 0.0 14.705129 31 TATACTG 265 0.0 14.660377 5 AGTTCCG 215 1.2732926E-11 14.627907 32 AATACTG 775 0.0 14.56129 5 GTATCAA 12100 0.0 14.3719015 2 GTATTAG 495 0.0 14.202021 1 TACTGGT 680 0.0 14.1470585 7 TACCCCG 435 0.0 14.034483 5 ATCTCGT 120 3.303196E-5 13.874999 6 TTGGACC 1525 0.0 13.586885 4 >>END_MODULE