##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088477_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2230691 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.424177082348027 31.0 31.0 34.0 30.0 34.0 2 31.620352617193507 31.0 31.0 34.0 30.0 34.0 3 31.7330513280414 31.0 31.0 34.0 30.0 34.0 4 35.41856312685172 37.0 35.0 37.0 33.0 37.0 5 35.299781995803095 37.0 35.0 37.0 33.0 37.0 6 35.359046591392534 37.0 35.0 37.0 33.0 37.0 7 35.19492614620313 37.0 35.0 37.0 32.0 37.0 8 35.24045598426676 37.0 35.0 37.0 32.0 37.0 9 36.78379165917646 39.0 37.0 39.0 32.0 39.0 10 36.63335352139763 39.0 35.0 39.0 32.0 39.0 11 36.670583689090066 39.0 35.0 39.0 32.0 39.0 12 36.51496150744321 38.0 35.0 39.0 32.0 39.0 13 36.53431963458856 38.0 35.0 39.0 32.0 39.0 14 37.505999262112056 39.0 36.0 41.0 32.0 41.0 15 37.531426809002234 39.0 36.0 41.0 32.0 41.0 16 37.39176022138432 39.0 36.0 41.0 32.0 41.0 17 37.45271756599188 39.0 36.0 41.0 32.0 41.0 18 37.32603664066426 39.0 36.0 41.0 32.0 41.0 19 37.404178794821874 39.0 36.0 41.0 32.0 41.0 20 37.30680582832853 39.0 36.0 41.0 31.0 41.0 21 37.15064211044918 39.0 36.0 40.0 31.0 41.0 22 37.054494324852705 39.0 36.0 40.0 31.0 41.0 23 36.857281891575305 39.0 36.0 40.0 30.0 41.0 24 37.06662464680227 39.0 36.0 40.0 31.0 41.0 25 37.02788015014182 39.0 36.0 41.0 31.0 41.0 26 36.85959597272773 39.0 36.0 40.0 30.0 41.0 27 36.8052625845534 39.0 35.0 40.0 30.0 41.0 28 36.61631844123637 39.0 35.0 40.0 30.0 41.0 29 36.46048914887808 39.0 35.0 40.0 30.0 41.0 30 36.28997337596287 38.0 35.0 40.0 30.0 41.0 31 36.01217918573214 38.0 35.0 40.0 29.0 41.0 32 35.87864522697227 38.0 35.0 40.0 29.0 41.0 33 35.67710902137499 38.0 34.0 40.0 27.0 41.0 34 35.564404482736514 38.0 34.0 40.0 27.0 41.0 35 35.31889311428611 38.0 34.0 40.0 26.0 41.0 36 35.17748356899275 38.0 34.0 40.0 25.0 41.0 37 35.025571896779965 38.0 33.0 40.0 25.0 41.0 38 34.94863833673064 38.0 33.0 40.0 25.0 41.0 39 34.86796557658591 38.0 33.0 40.0 24.0 41.0 40 34.73942379289646 38.0 33.0 40.0 24.0 41.0 41 34.54201500790562 38.0 33.0 40.0 23.0 41.0 42 34.31926519630016 38.0 33.0 40.0 22.0 41.0 43 33.987614151848014 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 4.0 14 6.0 15 13.0 16 25.0 17 79.0 18 186.0 19 414.0 20 996.0 21 1969.0 22 3656.0 23 6214.0 24 10217.0 25 15075.0 26 22056.0 27 30651.0 28 41602.0 29 53320.0 30 67502.0 31 82696.0 32 101882.0 33 123648.0 34 149739.0 35 182966.0 36 230354.0 37 307019.0 38 400053.0 39 398348.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.271919777324605 21.551797178542433 13.519891369983561 23.6563916741494 2 19.209339168894303 23.44981891261497 34.87690585562949 22.46393606286124 3 19.47042418694476 25.01511863364312 32.47361467814233 23.040842501269786 4 13.676389961675554 16.57065008107353 36.76658936625467 32.986370590996245 5 12.332232478635543 38.77493565895052 35.40042076647998 13.492411095933951 6 32.225171482737856 37.83760278765638 13.683383310373332 16.253842419232427 7 26.224205862667667 32.779573683670215 21.706412945585026 19.289807508077097 8 26.87221134617031 34.623800427759825 18.988914197439268 19.51507402863059 9 24.621115161176515 14.363710617024052 21.611778592373394 39.40339562942604 10 16.46373253848247 27.54052443839151 33.72251019975425 22.27323282337177 11 33.28013606546133 22.577398662566893 23.4233697092067 20.71909556276508 12 21.004567642941133 27.37196680311168 30.73769518055168 20.88577037339551 13 30.947585299801723 21.153176302768966 26.157365587613885 21.741872809815437 14 20.637775469574226 22.875871198655485 27.410788854216023 29.075564477554266 15 22.814186276808396 29.553219159444318 25.39410433807282 22.238490225674465 16 22.15672184090042 28.384478172906963 26.286832196839455 23.171967789353165 17 21.833907071844553 26.926095994469872 26.81630938574639 24.42368754793918 18 22.710855066882864 25.961103532492846 29.30898990492184 22.019051495702453 19 22.872912474206423 24.96100983955196 30.0663785347231 22.09969915151852 20 23.63438055741472 24.85395780948594 30.097445141438232 21.414216491661104 21 22.639576705155488 25.61856393377657 30.43509836189773 21.306760999170212 22 21.478322188057422 26.080393922779983 29.91252486337193 22.528759025790663 23 22.399337245723412 26.275355932309765 30.852412996690266 20.47289382527656 24 22.47532266907429 26.450099991437632 28.25702887580575 22.81754846368233 25 22.330614146020224 26.3127434503479 29.607955561751943 21.748686841879938 26 22.204464894510267 27.035299824135212 29.546898248121323 21.213337033233202 27 21.30304017902973 27.003157317620413 29.0047792365684 22.689023266781458 28 21.43698970408721 26.694912025018258 29.45957104771571 22.408527223178826 29 22.184919381483137 26.596422364191184 28.761446565212307 22.457211689113375 30 21.80553021462856 26.70226400698259 30.310607789245577 21.181597989143274 31 22.381271094920812 26.56719375296713 30.17266846909769 20.878866683014365 32 21.85121112695573 26.290642675296578 29.26922644149279 22.5889197562549 33 21.570715083353097 26.44624468382219 29.979365138425717 22.003675094399 34 21.126547782727414 26.835406607190325 30.393855536244153 21.644190073838107 35 20.802253651447018 28.73271107472976 29.11730042394935 21.347734849873873 36 22.8531428153877 26.62914764976413 28.994065067730133 21.523644467118036 37 21.676915359411055 27.197715864725325 29.11030707525157 22.01506170061205 38 21.55986642703987 25.984325036502142 30.3242806825329 22.131527853925085 39 21.128340949060178 25.857368860142437 30.984524526256664 22.02976566454072 40 20.24292024309956 26.550517306072425 30.543181462605084 22.66338098822293 41 21.56201822663919 25.20860128094837 30.71971868806572 22.509661804346727 42 20.20324643798715 27.158580009512747 30.227449700563636 22.410723851936464 43 20.67162148410515 26.60077079254814 29.584420253634413 23.143187469712302 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 148.0 1 272.5 2 397.0 3 870.5 4 1344.0 5 1344.0 6 2155.0 7 2966.0 8 3359.5 9 3753.0 10 5798.0 11 7843.0 12 7843.0 13 14948.5 14 22054.0 15 34897.0 16 47740.0 17 43767.5 18 39795.0 19 39795.0 20 43215.0 21 46635.0 22 37640.5 23 28646.0 24 32543.0 25 36440.0 26 36440.0 27 40790.5 28 45141.0 29 50495.0 30 55849.0 31 62827.5 32 69806.0 33 69806.0 34 78804.5 35 87803.0 36 97032.5 37 106262.0 38 113159.5 39 120057.0 40 120057.0 41 123645.0 42 127233.0 43 135581.5 44 143930.0 45 147997.5 46 152065.0 47 152065.0 48 188927.5 49 225790.0 50 214637.0 51 203484.0 52 186642.5 53 169801.0 54 169801.0 55 152183.5 56 134566.0 57 115214.5 58 95863.0 59 85330.0 60 74797.0 61 74797.0 62 66004.0 63 57211.0 64 49379.5 65 41548.0 66 35050.0 67 28552.0 68 28552.0 69 24177.5 70 19803.0 71 16615.5 72 13428.0 73 10967.5 74 8507.0 75 8507.0 76 6783.0 77 5059.0 78 4008.0 79 2957.0 80 2282.0 81 1607.0 82 1607.0 83 1240.0 84 873.0 85 649.0 86 425.0 87 343.0 88 261.0 89 261.0 90 216.0 91 171.0 92 108.5 93 46.0 94 35.0 95 24.0 96 24.0 97 17.0 98 10.0 99 5.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2230691.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.80926375295309 #Duplication Level Percentage of deduplicated Percentage of total 1 81.99958095290324 41.6633833626769 2 10.591643483669639 10.763072146780353 3 3.0480652771491026 4.6460985780866055 4 1.2932933198301084 2.628451255887212 5 0.661976589544387 1.6817271568220566 6 0.40101036134550994 1.2225024730362626 7 0.29673274799849425 1.055374072003584 8 0.1966678038470557 0.7994037053903277 9 0.16708825861673945 0.7640668261871598 >10 1.1262081179332626 11.324129897914052 >50 0.12083537514905032 4.272689353054991 >100 0.08317181211740529 8.345959975699412 >500 0.008678310902077041 3.0113855843250654 >1k 0.004339155451038518 3.6813872687396607 >5k 4.4277096439168553E-4 1.3826574281150057 >10k+ 2.656625786350113E-4 2.757710915281381 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23576 1.0568922365311915 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 21325 0.9559818011548888 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16390 0.7347499048501115 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8796 0.3943172765748371 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 6250 0.28018223949439885 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5408 0.24243608818971343 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 5142 0.2305115320768318 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5134 0.23015289881027898 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4698 0.21060738578314972 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 4189 0.18778934419872587 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3001 0.13453230411563055 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2582 0.11574888677992604 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 2541 0.11391089128884278 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2521 0.1130143081224607 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2338 0.10481057215006472 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.482915831910381E-5 0.0 0.0 0.0 0.0 2 4.482915831910381E-5 0.0 0.0 4.482915831910381E-5 0.0 3 4.482915831910381E-5 0.0 0.0 4.482915831910381E-5 0.0 4 4.482915831910381E-5 0.0 0.0 4.482915831910381E-5 0.0 5 4.482915831910381E-5 0.0 0.0 8.965831663820763E-5 0.0 6 1.7931663327641525E-4 0.0 0.0 8.965831663820763E-5 0.0 7 1.7931663327641525E-4 0.0 0.0 2.2414579159551906E-4 0.0 8 2.2414579159551906E-4 0.0 0.0 2.2414579159551906E-4 0.0 9 2.2414579159551906E-4 0.0 0.0 4.931207415101419E-4 0.0 10 2.2414579159551906E-4 0.0 0.0 6.724373747865572E-4 0.0 11 2.689749499146229E-4 0.0 0.0 8.517540080629724E-4 0.0 12 3.1380410823372666E-4 0.0 0.0 0.0010758997996584915 0.0 13 3.1380410823372666E-4 0.0 0.0 0.0012552164329349066 0.0 14 3.1380410823372666E-4 0.0 0.0 0.0013897039078922182 0.0 15 3.1380410823372666E-4 0.0 0.0 0.0018379954910832563 4.482915831910381E-5 16 3.586332665528305E-4 0.0 0.0 0.0021966287576360866 4.482915831910381E-5 17 3.586332665528305E-4 0.0 0.0 0.002869066132422644 4.482915831910381E-5 18 3.586332665528305E-4 0.0 0.0 0.0032276993989754743 4.482915831910381E-5 19 3.586332665528305E-4 0.0 0.0 0.004169111723676655 4.482915831910381E-5 20 3.586332665528305E-4 0.0 0.0 0.00717266533105661 4.482915831910381E-5 21 3.586332665528305E-4 0.0 0.0 0.01165558116296699 4.482915831910381E-5 22 3.586332665528305E-4 0.0 0.0 0.017348884269493176 4.482915831910381E-5 23 3.586332665528305E-4 0.0 0.0 0.020845558618383272 4.482915831910381E-5 24 4.482915831910381E-4 0.0 0.0 0.027345786574653325 4.482915831910381E-5 25 4.482915831910381E-4 0.0 0.0 0.030797631765224317 4.482915831910381E-5 26 4.931207415101419E-4 0.0 0.0 0.037297859721494374 4.482915831910381E-5 27 4.931207415101419E-4 0.0 0.0 0.08616164228931752 4.482915831910381E-5 28 4.931207415101419E-4 0.0 0.0 0.18088565381758387 4.482915831910381E-5 29 4.931207415101419E-4 0.0 0.0 0.2984277069302741 4.482915831910381E-5 30 4.931207415101419E-4 0.0 0.0 0.458602289604432 4.482915831910381E-5 31 4.931207415101419E-4 0.0 0.0 0.6405190140633552 4.482915831910381E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6560 0.0 23.632624 1 TATACCG 135 1.8189894E-12 20.555555 5 TTAACGG 475 0.0 17.526316 35 GTATTAG 765 0.0 17.169935 1 TAACGGC 495 0.0 16.818182 36 TCTATCG 165 5.4569682E-11 16.818182 29 GTATTGG 985 0.0 16.340101 1 TAGGGGT 320 0.0 15.609376 4 ATTAGAG 700 0.0 15.592856 3 GCACCGC 665 0.0 15.300753 10 GTATCAA 10205 0.0 15.173444 2 AACGGCC 575 0.0 15.121738 37 ACACCGT 135 3.976711E-7 15.074075 6 GTGACAC 655 0.0 14.969466 24 TAATACT 820 0.0 14.8902445 4 CACATGT 640 0.0 14.742188 28 AATACTG 800 0.0 14.56875 5 GACACAT 700 0.0 14.535714 26 GGCACCG 695 0.0 14.374101 9 TTTAACG 620 0.0 14.322581 34 >>END_MODULE