##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088475_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1319654 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.16386113329706 31.0 31.0 33.0 30.0 34.0 2 31.360000424353657 31.0 31.0 34.0 30.0 34.0 3 31.452836122195666 31.0 31.0 34.0 30.0 34.0 4 35.19156384931202 37.0 35.0 37.0 33.0 37.0 5 35.050945171992055 35.0 35.0 37.0 32.0 37.0 6 35.12367029539561 36.0 35.0 37.0 32.0 37.0 7 34.949439777396194 36.0 35.0 37.0 32.0 37.0 8 35.010771005127104 36.0 35.0 37.0 32.0 37.0 9 36.50170499236921 38.0 35.0 39.0 32.0 39.0 10 36.32284750396695 38.0 35.0 39.0 32.0 39.0 11 36.36396358439409 38.0 35.0 39.0 32.0 39.0 12 36.187320312748646 38.0 35.0 39.0 32.0 39.0 13 36.23036796008651 38.0 35.0 39.0 32.0 39.0 14 37.11222183996714 39.0 36.0 40.0 31.0 41.0 15 37.145376742691646 39.0 36.0 40.0 31.0 41.0 16 36.98791122521509 39.0 36.0 40.0 31.0 41.0 17 37.071106517314384 39.0 36.0 40.0 31.0 41.0 18 36.943338935811965 39.0 36.0 40.0 31.0 41.0 19 37.02501716358985 39.0 36.0 40.0 31.0 41.0 20 36.9253220920029 39.0 36.0 40.0 31.0 41.0 21 36.759902974567574 39.0 36.0 40.0 30.0 41.0 22 36.66364516759696 39.0 35.0 40.0 30.0 41.0 23 36.45137892205078 38.0 35.0 40.0 30.0 41.0 24 36.65815357661933 39.0 35.0 40.0 30.0 41.0 25 36.61743153887307 39.0 35.0 40.0 30.0 41.0 26 36.41086375671199 38.0 35.0 40.0 30.0 41.0 27 36.35173462134772 38.0 35.0 40.0 30.0 41.0 28 36.14194478249602 38.0 35.0 40.0 29.0 41.0 29 35.95530722446944 38.0 35.0 40.0 29.0 41.0 30 35.79424000533473 38.0 34.0 40.0 28.0 41.0 31 35.48478540587154 38.0 34.0 40.0 27.0 41.0 32 35.337735497334904 38.0 34.0 40.0 27.0 41.0 33 35.12665062205699 38.0 33.0 40.0 26.0 41.0 34 34.99355058219806 38.0 33.0 40.0 25.0 41.0 35 34.727422491046894 38.0 33.0 40.0 25.0 41.0 36 34.58692808872629 38.0 33.0 40.0 24.0 41.0 37 34.42158323318082 37.0 33.0 40.0 24.0 41.0 38 34.32655605181358 37.0 33.0 40.0 23.0 41.0 39 34.21934537386315 37.0 33.0 40.0 23.0 41.0 40 34.08137436024897 37.0 33.0 40.0 22.0 41.0 41 33.855057462031716 37.0 33.0 40.0 21.0 41.0 42 33.60814880264069 37.0 32.0 40.0 19.0 41.0 43 33.26426851280714 37.0 31.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 4.0 15 16.0 16 33.0 17 87.0 18 170.0 19 367.0 20 823.0 21 1716.0 22 2983.0 23 5100.0 24 7706.0 25 11494.0 26 16193.0 27 22159.0 28 28985.0 29 36870.0 30 45788.0 31 55260.0 32 66967.0 33 79827.0 34 95303.0 35 113912.0 36 143098.0 37 183985.0 38 229352.0 39 171453.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.419837320994745 22.356238832299983 14.236837837796875 22.987086008908395 2 19.98781498786803 24.206799661123295 33.771427965209064 22.03395738579961 3 20.285544544251753 24.967680922423604 32.72554775721515 22.021226776109497 4 14.59337068655875 17.194734377344364 35.73141141541647 32.48048352068042 5 12.321259966627617 39.33394662540333 34.81859638965971 13.526197018309343 6 32.458356508599984 37.734512228205276 13.289695632339992 16.517435630854756 7 26.0130306883471 33.20226362364681 21.229049432654318 19.55565625535178 8 27.336559431487345 34.661509759376315 18.672091320906844 19.329839488229492 9 24.666238271546938 14.304885977688093 21.499271778814748 39.52960397195022 10 16.614051865110095 28.01544950418822 33.26750799830865 22.102990632393034 11 33.54955162489562 22.48551514260556 23.14197509347147 20.82295813902735 12 21.054458214047013 27.619133500144734 30.556418576384413 20.769989709423832 13 31.784316191971534 21.06309684205102 26.006059163992983 21.146527801984462 14 20.512043308321726 23.22684582473891 27.444390726660174 28.816720140279195 15 22.85008039986239 29.82994027222287 25.231765296054874 22.088214031859867 16 21.9120314870413 28.383424746183465 26.477849496913585 23.226694269861646 17 21.869293011653053 27.037314326330993 26.903264037391622 24.190128624624332 18 23.001407944809777 25.68961258026725 29.272369878771254 22.036609596151717 19 22.935405795761614 24.976016440673085 30.42502049779715 21.663557265768148 20 23.71583763622889 24.805138316558732 30.210191459276448 21.26883258793593 21 22.76096613203158 25.44765521871642 30.640379978388278 21.15099867086373 22 21.440923151068386 25.98976701468718 30.17389406617189 22.395415768072542 23 22.414587460046345 26.108510261022964 31.146876378202165 20.330025900728526 24 22.348888420752715 26.19042567218377 28.709646619492684 22.751039287570833 25 22.252954183445052 26.30901736364229 29.770454982897032 21.667573470015626 26 21.98273183728462 27.065579310940596 29.79341554680242 21.158273304972365 27 21.117959707620333 26.962825104156092 29.39490199703862 22.524313191184962 28 21.59588801307009 26.627055273579288 29.619051660511015 22.15800505283961 29 21.91294081630488 26.49300498463991 29.011922822194304 22.582131376860904 30 21.827615420405653 26.62955592905413 30.57286228056748 20.969966369972735 31 22.355935722545457 26.471559969507158 30.43797843980316 20.734525868144228 32 21.888919368258648 26.384188582764878 29.39603865861809 22.33085339035838 33 21.632336961051912 26.411544238110903 29.952245058174338 22.00387374266285 34 21.012174403290558 26.91432754343184 30.47867092434835 21.59482712892925 35 20.63874318571383 28.83369428653268 29.473407423460994 21.054155104292487 36 22.830529820695425 26.55180827701807 29.25509262276324 21.36256927952327 37 21.726300984955145 27.277907693986453 29.205609955336776 21.79018136572162 38 21.636580497615284 25.825102640540624 30.590821533523183 21.947495328320908 39 21.093332040065047 25.79676187849239 31.25107035632067 21.85883572512189 40 20.137172319410997 26.43844522882513 30.816638300645472 22.6077441511184 41 21.393183364730454 25.37937974650931 30.94583883351242 22.281598055247816 42 20.318507730056513 27.108999783276527 30.343029309197718 22.229463177469245 43 20.573347256174724 26.876059936922857 29.624810745847018 22.925782061055397 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 94.0 1 152.0 2 210.0 3 432.5 4 655.0 5 655.0 6 1139.5 7 1624.0 8 1940.0 9 2256.0 10 3518.0 11 4780.0 12 4780.0 13 9784.0 14 14788.0 15 23874.0 16 32960.0 17 29742.5 18 26525.0 19 26525.0 20 28978.0 21 31431.0 22 24993.5 23 18556.0 24 20776.0 25 22996.0 26 22996.0 27 25261.0 28 27526.0 29 30134.0 30 32742.0 31 36407.0 32 40072.0 33 40072.0 34 44924.0 35 49776.0 36 54432.5 37 59089.0 38 62757.5 39 66426.0 40 66426.0 41 68537.5 42 70649.0 43 74786.5 44 78924.0 45 83356.5 46 87789.0 47 87789.0 48 111898.0 49 136007.0 50 128056.0 51 120105.0 52 110406.5 53 100708.0 54 100708.0 55 89547.5 56 78387.0 57 67630.5 58 56874.0 59 50667.5 60 44461.0 61 44461.0 62 39363.0 63 34265.0 64 29637.5 65 25010.0 66 21482.0 67 17954.0 68 17954.0 69 15403.0 70 12852.0 71 10963.0 72 9074.0 73 7508.5 74 5943.0 75 5943.0 76 4798.0 77 3653.0 78 2877.0 79 2101.0 80 1624.0 81 1147.0 82 1147.0 83 876.5 84 606.0 85 453.0 86 300.0 87 236.0 88 172.0 89 172.0 90 139.0 91 106.0 92 71.5 93 37.0 94 26.0 95 15.0 96 15.0 97 10.0 98 5.0 99 4.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1319654.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.35915878051549 #Duplication Level Percentage of deduplicated Percentage of total 1 84.71295071427932 47.74350640072052 2 9.029375782111453 10.177760467859214 3 2.4608046820133076 4.160666454042718 4 1.0321547638384847 2.3268549688495455 5 0.5642891453773456 1.5901430771221605 6 0.39185535603204713 1.3250782937763348 7 0.2751053080221385 1.0853292615327628 8 0.18778567640810628 0.8466754202712772 9 0.1498117580848875 0.7598938194984917 >10 1.0277620079024905 11.019060651633726 >50 0.09718090186980718 3.8329435659692894 >100 0.06229439392211528 6.49569318459929 >500 0.005123771644716098 1.9307411779160688 >1k 0.0029663941100987936 3.127242923351913 >5k 1.3483609591358154E-4 0.45337119169706247 >10k+ 4.0450828774074457E-4 3.125039141159621 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16241 1.2307013808164866 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14222 1.0777067322192029 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10660 0.8077874958132966 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5966 0.4520881988763721 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3678 0.2787094192871768 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3468 0.2627961571745321 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3236 0.24521579141199135 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3152 0.23885048656693345 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3127 0.23695605060114244 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2696 0.20429597455090498 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1883 0.14268891694338062 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1667 0.1263209901989461 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1622 0.12291100546052224 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1609 0.12192589875831088 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1561 0.1182885817039921 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1510 0.11442393233377841 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1403 0.10631574640019277 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 7.577743863164132E-5 0.0 0.0 0.0 0.0 6 7.577743863164132E-5 0.0 0.0 0.0 0.0 7 7.577743863164132E-5 0.0 0.0 0.0 0.0 8 7.577743863164132E-5 0.0 0.0 0.0 0.0 9 7.577743863164132E-5 0.0 0.0 7.577743863164132E-5 0.0 10 7.577743863164132E-5 0.0 0.0 7.577743863164132E-5 0.0 11 7.577743863164132E-5 0.0 0.0 2.2733231589492397E-4 0.0 12 7.577743863164132E-5 0.0 0.0 2.2733231589492397E-4 0.0 13 1.5155487726328264E-4 0.0 0.0 3.788871931582066E-4 0.0 14 1.5155487726328264E-4 0.0 0.0 5.304420704214893E-4 0.0 15 1.5155487726328264E-4 0.0 0.0 9.851067022113372E-4 0.0 16 2.2733231589492397E-4 0.0 0.0 0.001363993895369544 0.0 17 2.2733231589492397E-4 0.0 0.0 0.0019702134044226743 0.0 18 2.2733231589492397E-4 0.0 0.0 0.0024248780362125222 0.0 19 2.2733231589492397E-4 0.0 0.0 0.003485762177055501 0.0 20 2.2733231589492397E-4 0.0 0.0 0.005304420704214893 0.0 21 2.2733231589492397E-4 0.0 0.0 0.00909329263579696 0.0 22 3.031097545265653E-4 0.0 0.0 0.016367926744434526 0.0 23 3.031097545265653E-4 0.0 0.0 0.020914573062333006 0.0 24 3.031097545265653E-4 0.0 0.0 0.026143216327916257 0.0 25 3.031097545265653E-4 0.0 0.0 0.03038675289128817 0.0 26 3.031097545265653E-4 0.0 0.0 0.037055167490872606 0.0 27 4.5466463178984795E-4 0.0 0.0 0.08532539589922813 0.0 28 4.5466463178984795E-4 0.0 0.0 0.18035030394330634 0.0 29 4.5466463178984795E-4 0.0 0.0 0.30038176673582623 0.0 30 4.5466463178984795E-4 0.0 0.0 0.4692139000071231 0.0 31 4.5466463178984795E-4 0.0 0.0 0.6553232892864341 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4615 0.0 24.09209 1 TATCGCG 40 0.0019313386 23.125 16 CTATATC 170 0.0 19.588236 2 GTATTGG 525 0.0 19.02857 1 CTATCCT 70 1.2193712E-4 18.5 4 AATCGAC 60 9.2378026E-4 18.5 19 TCGCGCA 75 2.0675584E-4 17.266666 18 TACTGGT 335 0.0 16.014925 7 AATACTG 305 0.0 15.770491 5 CTCTAAT 235 0.0 15.744681 1 GTATCAA 7055 0.0 15.707299 2 GTTTAGG 225 0.0 15.622222 1 ATACTGG 285 0.0 15.578947 6 ATTGGAC 620 0.0 15.5161295 3 CTAATAC 275 0.0 15.472727 3 TATCCTC 120 1.9359304E-6 15.416667 5 TAATACT 315 0.0 15.269841 4 TCTATCG 110 1.4521136E-5 15.136364 29 TCTAATA 345 0.0 15.014493 2 TACCCCG 185 3.0559022E-10 15.000001 5 >>END_MODULE