##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088472_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2404890 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.389751298396185 31.0 31.0 34.0 30.0 34.0 2 31.576014287555772 31.0 31.0 34.0 30.0 34.0 3 31.684049998128813 31.0 31.0 34.0 30.0 34.0 4 35.371028196715855 37.0 35.0 37.0 33.0 37.0 5 35.25415923389427 37.0 35.0 37.0 33.0 37.0 6 35.32185713275867 37.0 35.0 37.0 33.0 37.0 7 35.1461796589449 37.0 35.0 37.0 32.0 37.0 8 35.208427412480404 37.0 35.0 37.0 32.0 37.0 9 36.73447101530631 39.0 35.0 39.0 32.0 39.0 10 36.593855852034814 39.0 35.0 39.0 32.0 39.0 11 36.62632303348594 39.0 35.0 39.0 32.0 39.0 12 36.471626976701636 38.0 35.0 39.0 32.0 39.0 13 36.49621521150655 38.0 35.0 39.0 32.0 39.0 14 37.44074365147678 39.0 36.0 41.0 32.0 41.0 15 37.4712223843918 39.0 36.0 41.0 32.0 41.0 16 37.3239408039453 39.0 36.0 41.0 32.0 41.0 17 37.415293838803436 39.0 36.0 41.0 32.0 41.0 18 37.29543347096956 39.0 36.0 41.0 32.0 41.0 19 37.379806976618475 39.0 36.0 41.0 32.0 41.0 20 37.28541929152685 39.0 36.0 41.0 31.0 41.0 21 37.13825372470259 39.0 36.0 40.0 31.0 41.0 22 37.04040392699874 39.0 36.0 40.0 31.0 41.0 23 36.842777008511824 39.0 35.0 40.0 30.0 41.0 24 37.03742416493062 39.0 36.0 40.0 31.0 41.0 25 36.99193435042767 39.0 36.0 41.0 31.0 41.0 26 36.80951062210745 39.0 36.0 40.0 30.0 41.0 27 36.74378412318235 39.0 35.0 40.0 30.0 41.0 28 36.552804909995885 39.0 35.0 40.0 30.0 41.0 29 36.378883441654295 39.0 35.0 40.0 30.0 41.0 30 36.20575660425217 38.0 35.0 40.0 30.0 41.0 31 35.919374690734294 38.0 35.0 40.0 29.0 41.0 32 35.77135918898578 38.0 34.0 40.0 28.0 41.0 33 35.55840183958518 38.0 34.0 40.0 27.0 41.0 34 35.44784792651639 38.0 34.0 40.0 27.0 41.0 35 35.20174103597254 38.0 34.0 40.0 26.0 41.0 36 35.0361380354195 38.0 34.0 40.0 25.0 41.0 37 34.87054917272724 38.0 33.0 40.0 25.0 41.0 38 34.76816153753394 38.0 33.0 40.0 24.0 41.0 39 34.66330435071875 38.0 33.0 40.0 24.0 41.0 40 34.518568001031234 38.0 33.0 40.0 23.0 41.0 41 34.29444881054851 38.0 33.0 40.0 22.0 41.0 42 34.05062975853365 38.0 33.0 40.0 21.0 41.0 43 33.70950646391311 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 5.0 14 7.0 15 18.0 16 41.0 17 87.0 18 220.0 19 556.0 20 1166.0 21 2257.0 22 4095.0 23 7240.0 24 11530.0 25 17399.0 26 24946.0 27 34694.0 28 46363.0 29 59891.0 30 74769.0 31 91937.0 32 111807.0 33 136122.0 34 163908.0 35 198087.0 36 249821.0 37 332459.0 38 418748.0 39 416711.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.54506027302704 21.42551218558853 13.915272632012273 23.114154909372154 2 19.336476928258673 23.80537155545576 34.49721193069122 22.360939585594352 3 19.991933102969366 24.686243445646163 32.72482317278545 22.597000278599022 4 14.054780052310084 16.43630269991559 36.0643106337504 33.444606614023925 5 12.37611699495611 38.978206903434256 34.800302716548366 13.845373385061272 6 32.35062726361705 37.26814947877034 13.381152568308737 17.000070689303875 7 25.944180399103494 33.16579968314559 21.240805192753097 19.64921472499782 8 27.430194312421776 34.17865266186811 18.6799396230181 19.711213402692014 9 24.65796772409549 14.281401644150044 21.63512676255463 39.425503869199844 10 16.678392774721505 27.618394188507583 33.1060048484546 22.597208188316305 11 33.18954297285946 22.534211543979143 23.330256269517523 20.945989213643866 12 21.229952305510853 27.446161778709214 30.598488912174776 20.725397003605153 13 31.608015335420745 21.016512189746724 26.120862076851747 21.25461039798078 14 20.557322788152472 23.227964688613618 27.5631317856534 28.651580737580513 15 22.78781981712261 29.597902606772035 25.595183147669953 22.019094428435395 16 21.793429221294943 28.413191455742258 26.570653959224742 23.22272536373805 17 21.78977001027074 26.82671556703217 26.903558998540472 24.479955424156614 18 22.945748038371818 25.546906511316525 29.49153599540935 22.015809454902303 19 22.86566121527388 24.806415262236527 30.543808656528988 21.784114865960603 20 23.759298762105544 24.60765357251267 30.365713192703204 21.267334472678584 21 22.60082581739705 25.469397768712916 30.8663182099805 21.063458203909533 22 21.27606668080453 25.887296300454494 30.471331329083657 22.365305689657323 23 22.242139973138066 26.077907929260796 31.419815459334938 20.2601366382662 24 22.305552436909796 26.05383198399927 28.896623130371868 22.74399244871907 25 22.07784971453996 26.357879154555924 29.99035298911801 21.573918141786113 26 21.851436032417283 26.945265687827717 30.056676188931718 21.146622090823282 27 20.93131078760359 27.01620448336514 29.581935140484596 22.47054958854667 28 21.279601145998363 26.593981429504055 29.790718078581556 22.33569934591603 29 21.73313540328248 26.552981633255573 29.26578762438199 22.448095339079956 30 21.612298275596807 26.614065508193725 30.96869295477132 20.80494326143815 31 22.17319711088657 26.547076997284698 30.672837427075667 20.606888464753066 32 21.766733613595633 26.353221976888758 29.58750712090782 22.292537288607793 33 21.40343217361293 26.31534082639955 30.258473360527926 22.0227536394596 34 20.665851660574912 26.88189480599944 30.862035269804437 21.590218263621207 35 20.331241761577452 28.746886551983668 29.711961877674238 21.209909808764642 36 22.544939685391014 26.428069475111126 29.642270540440517 21.384720299057335 37 21.456989716785383 27.05080066032126 29.638486583585944 21.85372303930741 38 21.23814394837186 25.679802402604697 31.100507715529606 21.98154593349384 39 20.718619146821684 25.563664034529648 31.73034941307087 21.9873674055778 40 19.757036704381488 26.23092948118209 31.33977021818046 22.672263596255963 41 21.10038296969924 25.074993035024473 31.40438855831244 22.420235436963853 42 19.75699512243803 27.070053100141795 30.851722947827138 22.321228829593036 43 20.16341703778551 26.691698996627704 30.122001422102468 23.022882543484318 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 138.0 1 288.5 2 439.0 3 1070.5 4 1702.0 5 1702.0 6 2778.0 7 3854.0 8 4434.5 9 5015.0 10 7929.0 11 10843.0 12 10843.0 13 20579.5 14 30316.0 15 46743.0 16 63170.0 17 57323.0 18 51476.0 19 51476.0 20 55224.5 21 58973.0 22 46573.0 23 34173.0 24 37836.0 25 41499.0 26 41499.0 27 45017.0 28 48535.0 29 52283.0 30 56031.0 31 61599.0 32 67167.0 33 67167.0 34 75255.5 35 83344.0 36 92762.0 37 102180.0 38 109770.5 39 117361.0 40 117361.0 41 121089.5 42 124818.0 43 134173.0 44 143528.0 45 152080.5 46 160633.0 47 160633.0 48 207238.5 49 253844.0 50 238616.0 51 223388.0 52 204927.0 53 186466.0 54 186466.0 55 166518.0 56 146570.0 57 125893.0 58 105216.0 59 93666.5 60 82117.0 61 82117.0 62 72621.5 63 63126.0 64 54523.0 65 45920.0 66 39093.0 67 32266.0 68 32266.0 69 27369.0 70 22472.0 71 18889.0 72 15306.0 73 12624.0 74 9942.0 75 9942.0 76 7899.5 77 5857.0 78 4627.5 79 3398.0 80 2604.0 81 1810.0 82 1810.0 83 1386.0 84 962.0 85 743.0 86 524.0 87 392.5 88 261.0 89 261.0 90 203.0 91 145.0 92 101.0 93 57.0 94 44.0 95 31.0 96 31.0 97 22.5 98 14.0 99 8.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2404890.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.311225203533446 #Duplication Level Percentage of deduplicated Percentage of total 1 80.72789965186828 39.80791639941527 2 11.126450623109301 10.973178247842757 3 3.400069726677884 5.029848119997886 4 1.454505490053856 2.8689379111928592 5 0.7567768214135564 1.8658796134769045 6 0.4744480696593063 1.403736936621107 7 0.3143785845448505 1.0851675227161441 8 0.22213716527440422 0.876308462633654 9 0.17081496031004076 0.7580785478382942 >10 1.1196231594717097 10.726036042747339 >50 0.12835934062155094 4.347432253322914 >100 0.09209761875442324 8.838539956830509 >500 0.0070232613876747355 2.3369051680716417 >1k 0.004569350782342573 3.81955437239062 >5k 5.077056424825081E-4 1.513025716877574 >10k+ 3.384704283216721E-4 3.749454728024653 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30458 1.2665028338094466 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26635 1.10753506397382 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 20998 0.8731376487074253 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11768 0.4893363106004849 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7171 0.2981841165292383 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 6496 0.27011630469584885 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6023 0.25044804544074784 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 5728 0.23818137212097018 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5686 0.23643493049578151 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5157 0.21443808240709555 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3490 0.14512098266448778 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3203 0.13318696489236515 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3145 0.13077521217186647 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3145 0.13077521217186647 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3143 0.13069204828495273 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3102 0.12898718860322095 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2770 0.11518198337553902 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2634 0.10952683906540425 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 4.158194345687329E-5 0.0 0.0 0.0 0.0 6 4.158194345687329E-5 0.0 0.0 0.0 0.0 7 4.158194345687329E-5 0.0 0.0 0.0 0.0 8 4.158194345687329E-5 0.0 0.0 0.0 0.0 9 4.158194345687329E-5 0.0 0.0 3.326555476549863E-4 0.0 10 4.158194345687329E-5 0.0 0.0 3.326555476549863E-4 0.0 11 1.2474583037061987E-4 0.0 0.0 4.989833214824795E-4 0.0 12 1.2474583037061987E-4 0.0 0.0 7.900569256805924E-4 0.0 13 1.2474583037061987E-4 0.0 0.0 9.148027560512123E-4 0.0 14 1.2474583037061987E-4 0.0 0.0 0.001164294416792452 0.0 15 1.2474583037061987E-4 0.0 0.0 0.0014137860775336917 0.0 16 1.2474583037061987E-4 0.0 0.0 0.001995933285929918 0.0 17 1.6632777382749315E-4 0.0 0.0 0.002869154098524257 0.0 18 1.6632777382749315E-4 0.0 0.0 0.0031186457592654966 0.0 19 2.0790971728436644E-4 0.0 0.0 0.0043661040629716956 0.0 20 2.4949166074123973E-4 0.0 0.0 0.007651077596064685 0.0 21 2.91073604198113E-4 0.0 0.0 0.012183509432863874 0.0 22 2.91073604198113E-4 0.0 0.0 0.019959332859299177 0.0 23 2.91073604198113E-4 0.0 4.158194345687329E-5 0.024616510526468988 0.0 24 3.326555476549863E-4 0.0 4.158194345687329E-5 0.031810186744508064 0.0 25 3.326555476549863E-4 0.0 4.158194345687329E-5 0.036758438015875985 0.0 26 3.326555476549863E-4 0.0 4.158194345687329E-5 0.04628070306749997 0.0 27 3.326555476549863E-4 0.0 4.158194345687329E-5 0.112229665390101 0.0 28 3.742374911118596E-4 0.0 4.158194345687329E-5 0.23672600409997963 0.0 29 3.742374911118596E-4 0.0 4.158194345687329E-5 0.3927414559501682 0.0 30 3.742374911118596E-4 0.0 4.158194345687329E-5 0.6150801076140696 0.0 31 3.742374911118596E-4 0.0 4.158194345687329E-5 0.8658608086024725 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9420 0.0 23.213375 1 GTATTGG 990 0.0 18.313131 1 GTATTAG 445 0.0 17.876404 1 ACCGTTA 425 0.0 16.97647 8 TAGGTCG 90 4.4492073E-5 16.444445 21 CGTTTAC 455 0.0 16.263737 28 CTAATAC 670 0.0 16.014925 3 ATTGGAC 1255 0.0 15.772909 3 TTGGACC 1585 0.0 15.757099 4 TAAACGT 155 7.219569E-9 15.5161295 4 CCGTTTA 465 0.0 15.516129 27 TATACCG 215 0.0 15.488372 5 GTATCAA 14325 0.0 15.226177 2 TGTTACG 225 1.8189894E-12 14.8 16 CGCCGTT 475 0.0 14.8 25 ATACTGG 640 0.0 14.742188 6 CGAACTA 465 0.0 14.720429 24 TGGACCC 1585 0.0 14.706626 5 TATACTG 265 0.0 14.6603775 5 GACCGTT 505 0.0 14.653466 7 >>END_MODULE