##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088470_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 579102 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.450347261794985 31.0 31.0 34.0 30.0 34.0 2 31.583738270632807 31.0 31.0 34.0 30.0 34.0 3 31.741442785554185 31.0 31.0 34.0 30.0 34.0 4 35.448520295215694 37.0 35.0 37.0 33.0 37.0 5 35.30482885571109 37.0 35.0 37.0 33.0 37.0 6 35.38245075996975 37.0 35.0 37.0 33.0 37.0 7 35.22371706538745 37.0 35.0 37.0 32.0 37.0 8 35.256913289886754 37.0 35.0 37.0 32.0 37.0 9 36.82119212159516 39.0 37.0 39.0 32.0 39.0 10 36.6658101681569 39.0 35.0 39.0 32.0 39.0 11 36.69852115862145 39.0 35.0 39.0 32.0 39.0 12 36.5584059457574 38.0 35.0 39.0 32.0 39.0 13 36.576815483282736 38.0 35.0 39.0 32.0 39.0 14 37.55167483448512 39.0 36.0 41.0 32.0 41.0 15 37.579276189686794 39.0 36.0 41.0 32.0 41.0 16 37.44271302810213 39.0 36.0 41.0 32.0 41.0 17 37.49243483876761 39.0 36.0 41.0 32.0 41.0 18 37.373656108941084 39.0 36.0 41.0 32.0 41.0 19 37.449950095147315 39.0 36.0 41.0 32.0 41.0 20 37.35034588034578 39.0 36.0 41.0 31.0 41.0 21 37.19541807833508 39.0 36.0 40.0 31.0 41.0 22 37.08537010751129 39.0 36.0 40.0 31.0 41.0 23 36.882319522294864 39.0 36.0 40.0 30.0 41.0 24 37.10851628901299 39.0 36.0 41.0 31.0 41.0 25 37.07031576475301 39.0 36.0 41.0 31.0 41.0 26 36.89687308971477 39.0 36.0 40.0 31.0 41.0 27 36.827622767664415 39.0 35.0 40.0 30.0 41.0 28 36.634836350073044 39.0 35.0 40.0 30.0 41.0 29 36.47695397356597 39.0 35.0 40.0 30.0 41.0 30 36.30401034705458 38.0 35.0 40.0 30.0 41.0 31 36.0631926672676 38.0 35.0 40.0 29.0 41.0 32 35.92580754340341 38.0 35.0 40.0 29.0 41.0 33 35.739306719714314 38.0 34.0 40.0 28.0 41.0 34 35.62077665074546 38.0 34.0 40.0 27.0 41.0 35 35.39303438772444 38.0 34.0 40.0 26.0 41.0 36 35.23845540163909 38.0 34.0 40.0 26.0 41.0 37 35.084038735835826 38.0 34.0 40.0 25.0 41.0 38 35.00420133240776 38.0 33.0 40.0 25.0 41.0 39 34.914735227990924 38.0 33.0 40.0 24.0 41.0 40 34.78846904345003 38.0 33.0 40.0 24.0 41.0 41 34.58977693048893 38.0 33.0 40.0 23.0 41.0 42 34.370566843146804 38.0 33.0 40.0 22.0 41.0 43 34.04201159726611 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 6.0 16 8.0 17 21.0 18 34.0 19 120.0 20 236.0 21 485.0 22 1004.0 23 1573.0 24 2535.0 25 3837.0 26 5501.0 27 7623.0 28 10384.0 29 13354.0 30 16960.0 31 21229.0 32 26380.0 33 32127.0 34 39296.0 35 47654.0 36 60278.0 37 80337.0 38 103851.0 39 104267.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.41222099043001 21.323013907739917 13.372601027107486 23.892164074722587 2 19.099571405382818 23.52953365728317 34.636903343452445 22.733991593881562 3 19.49397515463597 24.913055040390123 32.34335229372373 23.249617511250175 4 13.958853535301207 16.446498198935593 36.4541997782774 33.1404484874858 5 12.581375992484917 38.532935475961054 35.29619997858754 13.58948855296649 6 32.53261083539687 37.69854015354808 13.791698180976752 15.977150830078294 7 26.31056359674116 32.732230246139714 21.692378890074632 19.264827267044492 8 27.019247041108475 34.39808531139592 19.195754806579842 19.386912840915763 9 24.80322982825133 14.462909815541995 21.240472317484656 39.493388038722024 10 16.332183276866598 27.505171800477292 33.85327627948099 22.309368643175123 11 33.47234166001844 22.6343545696613 23.159823312646132 20.733480457674123 12 20.970571678219034 27.16015486045636 30.906299753756677 20.962973707567926 13 31.047898297709214 21.176407610403693 25.85157709695356 21.924116994933534 14 20.68547509765119 22.998193755158848 27.280340941664853 29.03599020552511 15 23.022023754019152 29.694423434904387 25.063287641900732 22.220265169175725 16 22.241850313070927 28.499815231168256 26.074163100800895 23.184171354959922 17 21.86816830195717 27.118538703026413 26.835514296272507 24.177778698743918 18 22.815324416078685 25.98661375716195 29.002144699897425 22.195917126861932 19 22.88785049956657 25.426436102793637 29.752962345148177 21.932751052491618 20 23.65041046309631 25.1719040859814 29.61309061270726 21.56459483821503 21 22.734682318486207 25.794246954767896 29.96225190035607 21.508818826389824 22 21.780964320620548 26.189686790928025 29.477017865591897 22.55233102285953 23 22.48204979433675 26.412963519380007 30.083301387320365 21.02168529896288 24 22.399853566383815 26.46304105321688 28.233022852623545 22.904082527775763 25 22.38465762508159 26.50914692057703 29.20625382057047 21.899941633770908 26 22.15861799821102 27.117675297270598 29.114042085850162 21.609664618668216 27 21.434047887936842 27.25754702971152 28.742950292003826 22.565454790347815 28 21.80911134825989 26.883865018597756 28.954312021025657 22.35271161211669 29 22.162416983536577 26.92427240796958 28.465279000935933 22.44803160755791 30 21.952782066026366 26.975040666411097 29.889898498019345 21.18227876954319 31 22.514341169603973 26.83499625281902 29.634848437753625 21.015814139823384 32 22.00873075900273 26.65765271057603 28.847940431910096 22.485676098511142 33 21.72035323656282 26.718436475784923 29.406391274766797 22.15481901288547 34 21.087649498706618 27.038241967736255 29.89007117917051 21.98403735438662 35 20.913586898335698 28.601006385748974 28.978487382188284 21.506919333727044 36 22.684777465800497 26.834305528214376 28.728445075306254 21.75247193067888 37 21.778546784504286 27.36357325652476 28.892837531212116 21.965042427758842 38 21.63815700860988 26.152733024579433 30.039267693774153 22.16984227303653 39 21.184005581054805 26.09471215778913 30.663164692921107 22.058117568234955 40 20.39019032916481 26.482208660995816 30.467344267503826 22.660256742335548 41 21.401929193820777 25.540751024862633 30.421238400143668 22.63608138117292 42 20.364115475339407 27.03547906931767 30.107476748483 22.49292870685993 43 20.646794519790987 26.639175827401733 29.50136590790569 23.212663744901587 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 19.0 1 52.5 2 86.0 3 200.0 4 314.0 5 314.0 6 518.0 7 722.0 8 852.0 9 982.0 10 1519.5 11 2057.0 12 2057.0 13 3911.5 14 5766.0 15 9021.5 16 12277.0 17 11345.5 18 10414.0 19 10414.0 20 11150.5 21 11887.0 22 9939.5 23 7992.0 24 9079.0 25 10166.0 26 10166.0 27 11428.0 28 12690.0 29 13977.0 30 15264.0 31 17169.0 32 19074.0 33 19074.0 34 21084.5 35 23095.0 36 25091.5 37 27088.0 38 28915.5 39 30743.0 40 30743.0 41 31409.0 42 32075.0 43 33801.5 44 35528.0 45 36963.5 46 38399.0 47 38399.0 48 46679.5 49 54960.0 50 52460.0 51 49960.0 52 46461.0 53 42962.0 54 42962.0 55 38940.5 56 34919.0 57 30422.0 58 25925.0 59 23300.0 60 20675.0 61 20675.0 62 18287.5 63 15900.0 64 13856.0 65 11812.0 66 10196.0 67 8580.0 68 8580.0 69 7265.5 70 5951.0 71 5071.5 72 4192.0 73 3455.0 74 2718.0 75 2718.0 76 2217.0 77 1716.0 78 1370.0 79 1024.0 80 800.0 81 576.0 82 576.0 83 440.5 84 305.0 85 219.5 86 134.0 87 110.5 88 87.0 89 87.0 90 66.0 91 45.0 92 30.0 93 15.0 94 10.0 95 5.0 96 5.0 97 4.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 579102.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 66.9971267103896 #Duplication Level Percentage of deduplicated Percentage of total 1 89.12718282229132 59.7126516088511 2 6.510053290919668 8.723097304462675 3 1.6129532769777448 3.241897052268483 4 0.7366281645036423 1.9740788190276894 5 0.4298973525200031 1.4400943699621833 6 0.2648021347558999 1.0644589305253613 7 0.2016199411651314 0.9455569721907121 8 0.14929879183381622 0.8002072059358613 9 0.13098089401286245 0.7897809197537871 >10 0.7351747899318748 9.227540372376072 >50 0.06389773737010578 2.9741437181400934 >100 0.033112985351061934 4.2073029373823845 >500 0.002069561584440975 0.8993489162543715 >1k 0.002069561584440975 2.9791691118705708 >5k 2.5869519805512187E-4 1.0206717609986498 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5889 1.0169192991908163 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4991 0.8618516254476759 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4092 0.706611270553374 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2192 0.3785170833462844 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1277 0.22051383003339653 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1199 0.20704470024278968 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1179 0.2035910772195572 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1159 0.20013745419632467 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1100 0.18994926627778871 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 964 0.16646462971980758 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 640 0.1105159367434407 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 639 0.11034325559227907 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 636 0.1098252121387942 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 617 0.10654427026672329 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 604 0.10429941530162216 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 582 0.10050042997606638 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 1.726811511616261E-4 0.0 9 0.0 0.0 0.0 0.0010360869069697565 0.0 10 0.0 0.0 0.0 0.0010360869069697565 0.0 11 0.0 0.0 0.0 0.0010360869069697565 0.0 12 0.0 0.0 0.0 0.0010360869069697565 0.0 13 0.0 0.0 0.0 0.0010360869069697565 0.0 14 0.0 0.0 0.0 0.0012087680581313828 0.0 15 0.0 0.0 0.0 0.0012087680581313828 0.0 16 0.0 0.0 0.0 0.002072173813939513 0.0 17 0.0 0.0 0.0 0.0027628984185860176 0.0 18 0.0 0.0 0.0 0.0027628984185860176 0.0 19 0.0 0.0 0.0 0.00310826072090927 0.0 20 0.0 0.0 0.0 0.004835072232525531 0.0 21 0.0 0.0 0.0 0.0079433329534348 0.0 22 0.0 0.0 0.0 0.012951086337121958 0.0 23 0.0 0.0 0.0 0.015713984755707976 0.0 24 0.0 0.0 0.0 0.020203694685910253 0.0 25 0.0 0.0 0.0 0.025384129220759038 0.0 26 0.0 0.0 0.0 0.03263673756954733 0.0 27 0.0 0.0 0.0 0.078051880325055 0.0 28 0.0 0.0 0.0 0.16491049935935292 0.0 29 0.0 0.0 0.0 0.2818156386957738 0.0 30 0.0 0.0 0.0 0.4413730223691163 0.0 31 0.0 0.0 0.0 0.604556710216853 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTACCG 35 8.864059E-4 26.428572 5 GTCCGTG 40 0.0019300367 23.125 7 GGTATCA 1635 0.0 21.272171 1 CTAGTGA 45 0.0038235495 20.555557 29 GACCTAG 45 0.0038235495 20.555557 6 GTAAGAC 55 5.1388604E-4 20.181818 3 ACGGGCG 70 1.2178719E-4 18.5 5 CGTGTTT 50 0.0070307706 18.5 18 GAATTAG 60 9.229272E-4 18.5 1 TAGTACC 50 0.0070307706 18.5 4 TTATACC 85 2.71934E-5 17.411764 4 TTACACT 75 2.0650354E-4 17.266666 4 ACTGAGC 65 0.0015786545 17.076923 8 GGACCGT 120 1.0385338E-7 16.958334 6 CGGGTAA 80 3.3789416E-4 16.1875 26 CGTTATT 80 3.3789416E-4 16.1875 10 TTGGACC 275 0.0 16.145454 4 TGGACCC 255 0.0 15.960784 5 ATTATAC 70 0.0025904109 15.857143 3 TACACTT 70 0.0025904109 15.857143 5 >>END_MODULE