##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088467_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2800050 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.409477330761952 31.0 31.0 34.0 30.0 34.0 2 31.53179728933412 31.0 31.0 34.0 30.0 34.0 3 31.66728094141176 31.0 31.0 34.0 30.0 34.0 4 35.366168104140996 37.0 35.0 37.0 33.0 37.0 5 35.25006124890627 37.0 35.0 37.0 33.0 37.0 6 35.33602578525384 37.0 35.0 37.0 33.0 37.0 7 35.160826413814036 37.0 35.0 37.0 32.0 37.0 8 35.22448349136623 37.0 35.0 37.0 32.0 37.0 9 36.75584114569383 39.0 37.0 39.0 32.0 39.0 10 36.61704076712916 39.0 35.0 39.0 32.0 39.0 11 36.64795307226657 39.0 35.0 39.0 32.0 39.0 12 36.4951447295584 38.0 35.0 39.0 32.0 39.0 13 36.523293155479365 38.0 35.0 39.0 32.0 39.0 14 37.44486491312655 39.0 36.0 41.0 32.0 41.0 15 37.475769718397885 39.0 36.0 41.0 32.0 41.0 16 37.333117265763114 39.0 36.0 41.0 32.0 41.0 17 37.427238799307155 39.0 36.0 41.0 32.0 41.0 18 37.29891751933001 39.0 36.0 40.0 32.0 41.0 19 37.390411242656384 39.0 36.0 41.0 32.0 41.0 20 37.29914251531223 39.0 36.0 41.0 31.0 41.0 21 37.14902983875288 39.0 36.0 40.0 31.0 41.0 22 37.04700880341422 39.0 36.0 40.0 31.0 41.0 23 36.83973536186854 39.0 35.0 40.0 30.0 41.0 24 37.04188139497509 39.0 36.0 40.0 31.0 41.0 25 37.00217996107212 39.0 36.0 41.0 31.0 41.0 26 36.79551186585954 39.0 35.0 40.0 30.0 41.0 27 36.72937840395707 39.0 35.0 40.0 30.0 41.0 28 36.52378636095784 39.0 35.0 40.0 30.0 41.0 29 36.346142033177976 38.0 35.0 40.0 30.0 41.0 30 36.14946661666756 38.0 35.0 40.0 30.0 41.0 31 35.85378296816128 38.0 35.0 40.0 29.0 41.0 32 35.70673523687077 38.0 34.0 40.0 28.0 41.0 33 35.493244763486366 38.0 34.0 40.0 27.0 41.0 34 35.364942411742646 38.0 34.0 40.0 27.0 41.0 35 35.10128783414582 38.0 34.0 40.0 25.0 41.0 36 34.92612703344583 38.0 33.0 40.0 25.0 41.0 37 34.75780932483349 38.0 33.0 40.0 24.0 41.0 38 34.63665791682291 38.0 33.0 40.0 24.0 41.0 39 34.51424260281066 38.0 33.0 40.0 23.0 41.0 40 34.34372886198461 38.0 33.0 40.0 23.0 41.0 41 34.09745790253746 38.0 33.0 40.0 21.0 41.0 42 33.829215906858806 37.0 33.0 40.0 20.0 41.0 43 33.479341083194946 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 1.0 13 7.0 14 13.0 15 25.0 16 38.0 17 126.0 18 286.0 19 682.0 20 1354.0 21 2748.0 22 5180.0 23 8719.0 24 13758.0 25 20844.0 26 29529.0 27 40919.0 28 54811.0 29 70293.0 30 87545.0 31 107731.0 32 130686.0 33 159321.0 34 192711.0 35 233147.0 36 294952.0 37 389942.0 38 482760.0 39 471919.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.70257673970107 21.256477562900663 14.08299851788361 22.95794717951465 2 19.396475062945303 23.876252209781967 34.402492812628346 22.32477991464438 3 20.061106051677648 24.38767164872056 32.96326851306227 22.58795378653953 4 13.97192907269513 16.219996071498723 35.670970161247126 34.13710469455903 5 12.401099980357493 38.844413492616205 34.67059516794343 14.083891359082873 6 32.58423956715058 36.89659113230121 12.97716112212282 17.542008178425387 7 26.096569704112426 33.1809431974429 20.804092784057428 19.918394314387243 8 27.81936036856485 33.83211014089034 18.45392046570597 19.894609024838843 9 24.524562061391762 14.245888466277387 21.65607757004339 39.57347190228746 10 16.798200032142283 27.530686952018712 32.760914983661 22.910198032178 11 33.198300030356606 22.269495187585935 23.385082409242692 21.14712237281477 12 21.511008731986927 27.301548186639522 30.48406278459313 20.703380296780416 13 32.40406421313905 20.61688184139569 26.07367725576329 20.905376689701967 14 20.621060338208245 23.1239085016339 27.612042642095673 28.64298851806218 15 22.68491634077963 29.415689005553475 25.62554240102855 22.273852252638346 16 21.847217013981894 28.170925519187158 26.526276316494346 23.455581150336602 17 21.99314297958965 26.490741236763633 26.65052409778397 24.865591685862753 18 23.45486687737719 24.999517865752395 29.444009928394138 22.101605328476275 19 23.059873930822665 24.225245977750397 30.80005714183675 21.914822949590185 20 24.097819681791396 23.834145818824666 30.607239156443633 21.460795342940305 21 22.891484080641415 24.698201817824682 31.30683380653917 21.103480294994732 22 21.274084391350154 25.221835324369206 30.78937876109355 22.714701523187088 23 22.47081302119605 25.438152890126965 31.78318244317066 20.307851645506332 24 22.319387153800825 25.512580132497636 29.05198121462117 23.116051499080374 25 22.21353190121605 25.809074837949318 30.323279941429615 21.65411331940501 26 22.085177050409815 26.520704987410937 30.262316744343853 21.131801217835395 27 20.799735719005017 26.680952125854894 29.877180764629202 22.642131390510883 28 21.437581471759433 26.112497991107304 29.947965214906873 22.50195532222639 29 21.669434474384385 26.040856413278334 29.29861966750594 22.991089444831342 30 21.6509705183836 26.32352993696541 31.16647917001482 20.859020374636167 31 22.456241852824057 26.048463420296063 30.861591757290046 20.63370296958983 32 22.089391260870343 25.909930179818218 29.616256852556205 22.384421706755237 33 21.59293584043142 25.881037838610027 30.438420742486745 22.087605578471813 34 20.702737451116946 26.687487723433513 30.906948090212676 21.702826735236872 35 20.235138658238245 29.01898180389636 29.72975482580668 21.016124712058712 36 22.773664755986502 26.247709862323887 29.578293244763486 21.400332136926124 37 21.636899341083197 27.138801092837628 29.51283012803343 21.71146943804575 38 21.450295530436954 25.487116301494616 31.069623756718627 21.992964411349796 39 20.986339529651257 25.251870502312457 31.794182246745596 21.96760772129069 40 19.770075534365457 25.984250281244982 31.346225960250713 22.899448224138855 41 21.311333726183463 24.89355547222371 31.3525472759415 22.442563525651327 42 19.955536508276637 26.948590203746363 30.75237942179604 22.34349386618096 43 20.304887412724774 26.826806664166714 29.913715826503097 22.95459009660542 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 172.0 1 362.0 2 552.0 3 1286.0 4 2020.0 5 2020.0 6 3275.5 7 4531.0 8 5142.0 9 5753.0 10 8974.5 11 12196.0 12 12196.0 13 23910.5 14 35625.0 15 57555.5 16 79486.0 17 71783.0 18 64080.0 19 64080.0 20 67816.5 21 71553.0 22 54879.5 23 38206.0 24 41689.5 25 45173.0 26 45173.0 27 48965.0 28 52757.0 29 56792.5 30 60828.0 31 66585.0 32 72342.0 33 72342.0 34 81044.5 35 89747.0 36 98946.5 37 108146.0 38 116040.0 39 123934.0 40 123934.0 41 129249.5 42 134565.0 43 145542.0 44 156519.0 45 170964.0 46 185409.0 47 185409.0 48 249640.5 49 313872.0 50 294214.5 51 274557.0 52 251798.5 53 229040.0 54 229040.0 55 202717.0 56 176394.0 57 150218.0 58 124042.0 59 110017.0 60 95992.0 61 95992.0 62 84742.0 63 73492.0 64 64014.0 65 54536.0 66 46570.0 67 38604.0 68 38604.0 69 33108.5 70 27613.0 71 23312.0 72 19011.0 73 15808.5 74 12606.0 75 12606.0 76 10095.5 77 7585.0 78 5864.5 79 4144.0 80 3215.0 81 2286.0 82 2286.0 83 1780.0 84 1274.0 85 973.5 86 673.0 87 503.5 88 334.0 89 334.0 90 291.5 91 249.0 92 166.5 93 84.0 94 66.0 95 48.0 96 48.0 97 30.5 98 13.0 99 10.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2800050.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.03097422425367 #Duplication Level Percentage of deduplicated Percentage of total 1 78.7404166490909 36.24498089181298 2 11.691247917220108 10.763190630538363 3 3.7719882720291262 5.208848847718795 4 1.742029697392409 3.207492963942176 5 0.9382246412146272 2.1593697138155075 6 0.5771397974019957 1.593978428280135 7 0.38229647307898623 1.231823536882533 8 0.2933458496847749 1.0802396196505333 9 0.2316644103858074 0.9597364652831422 >10 1.388264929246491 12.25884798586971 >50 0.14015773547136964 4.425219571092998 >100 0.0904780525107647 7.958777723552004 >500 0.006839089170713111 2.1036458585243842 >1k 0.005129316878033016 4.826000565479164 >5k 4.663015343666378E-4 1.796205335631593 >10k+ 3.1086768957775855E-4 4.181641861926161 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39995 1.4283673505830252 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34613 1.236156497205407 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 27629 0.9867323797789325 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14654 0.5233477973607614 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9715 0.34695809003410655 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8922 0.318637167193443 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8624 0.3079945000982125 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8003 0.28581632470848733 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7984 0.2851377653970465 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 6962 0.24863841717112195 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4629 0.16531847645577757 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4429 0.1581757468616632 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4399 0.15710433742254604 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4258 0.15206871305869538 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4234 0.15121158550740166 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3703 0.13224763843502793 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3620 0.12928340565347046 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 3379 0.12067641649256262 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3370 0.12035499366082748 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3187 0.11381939608221282 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3146 0.11235513651541937 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3027 0.10810521240692131 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3003 0.10724808485562758 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2834 0.10121247834860092 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 3.5713647970571955E-5 0.0 0.0 0.0 0.0 3 3.5713647970571955E-5 0.0 0.0 0.0 0.0 4 3.5713647970571955E-5 0.0 0.0 3.5713647970571955E-5 0.0 5 3.5713647970571955E-5 0.0 0.0 7.142729594114391E-5 0.0 6 7.142729594114391E-5 0.0 0.0 7.142729594114391E-5 0.0 7 1.0714094391171586E-4 0.0 0.0 7.142729594114391E-5 0.0 8 1.0714094391171586E-4 0.0 0.0 7.142729594114391E-5 0.0 9 1.0714094391171586E-4 0.0 0.0 2.1428188782343172E-4 0.0 10 1.7856823985285976E-4 0.0 0.0 3.214228317351476E-4 0.0 11 1.7856823985285976E-4 0.0 0.0 4.999910715880073E-4 0.0 12 1.7856823985285976E-4 0.0 0.0 6.428456634702952E-4 0.0 13 1.7856823985285976E-4 0.0 0.0 8.571275512937269E-4 0.0 14 4.2856377564686344E-4 0.0 0.0 9.999821431760146E-4 0.0 15 4.2856377564686344E-4 0.0 0.0 0.0013214049749111622 0.0 16 4.999910715880073E-4 0.0 0.0 0.0018213960464991696 0.0 17 4.999910715880073E-4 0.0 0.0 0.0026428099498223244 0.0 18 4.999910715880073E-4 0.0 0.0 0.003178514669380904 0.0 19 4.999910715880073E-4 0.0 0.0 0.004107069516615775 0.0 20 4.999910715880073E-4 0.0 0.0 0.006749879466438099 0.0 21 4.999910715880073E-4 0.0 0.0 0.012106926662023893 0.0 22 5.357047195585793E-4 0.0 0.0 0.01942822449599114 0.0 23 5.357047195585793E-4 0.0 0.0 0.023892430492312638 0.0 24 5.357047195585793E-4 0.0 0.0 0.03003517794325101 0.0 25 5.357047195585793E-4 0.0 0.0 0.03503508865913109 0.0 26 5.357047195585793E-4 0.0 0.0 0.0445706326672738 0.0 27 5.357047195585793E-4 0.0 3.5713647970571955E-5 0.10335529722683523 0.0 28 5.357047195585793E-4 0.0 3.5713647970571955E-5 0.2174961161407832 0.0 29 5.714183675291513E-4 0.0 3.5713647970571955E-5 0.3633149408046285 0.0 30 6.071320154997232E-4 0.0 3.5713647970571955E-5 0.5703826717380047 0.0 31 6.071320154997232E-4 0.0 3.5713647970571955E-5 0.7909858752522276 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10455 0.0 23.392633 1 GTATTGG 1455 0.0 19.072165 1 ATTGGAC 1630 0.0 17.592024 3 ACCGTTA 470 0.0 16.531916 8 TTGGACC 2020 0.0 16.301981 4 TATACTG 320 0.0 16.1875 5 TTCGTTA 265 0.0 16.056604 30 TTAACGG 290 0.0 15.948276 35 TATTGGA 1765 0.0 15.407931 2 CGTTCGC 315 0.0 15.269841 23 GTATTAG 500 0.0 15.170001 1 ACGTTCG 305 0.0 15.163935 22 CCGTTTA 505 0.0 15.019802 27 GACCGTT 525 0.0 14.799999 7 TAGTACT 525 0.0 14.799999 4 GTATCAA 16595 0.0 14.74872 2 TGGACCC 2130 0.0 14.678404 5 CCGTTAT 525 0.0 14.4476185 9 ATTAGAG 490 0.0 14.346938 3 CGCCGTT 535 0.0 14.177571 25 >>END_MODULE