##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088466_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1461484 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.392736424073064 31.0 31.0 34.0 30.0 34.0 2 31.52266873944566 31.0 31.0 34.0 30.0 34.0 3 31.66196619326657 31.0 31.0 34.0 30.0 34.0 4 35.368176456259526 37.0 35.0 37.0 33.0 37.0 5 35.235765153775205 37.0 35.0 37.0 33.0 37.0 6 35.32164430127186 37.0 35.0 37.0 33.0 37.0 7 35.15333524007105 37.0 35.0 37.0 32.0 37.0 8 35.20281918926242 37.0 35.0 37.0 32.0 37.0 9 36.73813397888721 39.0 35.0 39.0 32.0 39.0 10 36.59056548001894 39.0 35.0 39.0 32.0 39.0 11 36.62713379003807 39.0 35.0 39.0 32.0 39.0 12 36.47766722044169 38.0 35.0 39.0 32.0 39.0 13 36.50708457978329 38.0 35.0 39.0 32.0 39.0 14 37.442733550281766 39.0 36.0 41.0 32.0 41.0 15 37.47475921734347 39.0 36.0 41.0 32.0 41.0 16 37.331077863322484 39.0 36.0 41.0 32.0 41.0 17 37.41672300209924 39.0 36.0 41.0 32.0 41.0 18 37.29433302040939 39.0 36.0 40.0 32.0 41.0 19 37.386916312460485 39.0 36.0 41.0 32.0 41.0 20 37.28935725604933 39.0 36.0 41.0 31.0 41.0 21 37.14138642639947 39.0 36.0 40.0 31.0 41.0 22 37.030848096865924 39.0 36.0 40.0 31.0 41.0 23 36.833118939379425 39.0 35.0 40.0 30.0 41.0 24 37.039452364856544 39.0 36.0 40.0 31.0 41.0 25 36.9992124443374 39.0 36.0 41.0 31.0 41.0 26 36.79059572325116 39.0 35.0 40.0 30.0 41.0 27 36.722978835211336 39.0 35.0 40.0 30.0 41.0 28 36.519264665230686 39.0 35.0 40.0 30.0 41.0 29 36.33632047973156 38.0 35.0 40.0 30.0 41.0 30 36.136630301802825 38.0 35.0 40.0 30.0 41.0 31 35.864267415859494 38.0 35.0 40.0 29.0 41.0 32 35.71514228003865 38.0 34.0 40.0 28.0 41.0 33 35.5091010233434 38.0 34.0 40.0 27.0 41.0 34 35.38925366271543 38.0 34.0 40.0 27.0 41.0 35 35.13174622506986 38.0 34.0 40.0 26.0 41.0 36 34.95231490731339 38.0 33.0 40.0 25.0 41.0 37 34.785192995612675 38.0 33.0 40.0 24.0 41.0 38 34.6668612177759 38.0 33.0 40.0 24.0 41.0 39 34.54592729034324 38.0 33.0 40.0 23.0 41.0 40 34.39464886375766 38.0 33.0 40.0 23.0 41.0 41 34.16176365940373 38.0 33.0 40.0 21.0 41.0 42 33.91735181500447 38.0 33.0 40.0 20.0 41.0 43 33.55281754709596 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 5.0 15 7.0 16 26.0 17 56.0 18 141.0 19 295.0 20 742.0 21 1436.0 22 2703.0 23 4407.0 24 7062.0 25 10747.0 26 15363.0 27 21277.0 28 28395.0 29 36596.0 30 45817.0 31 56742.0 32 68071.0 33 83782.0 34 101003.0 35 121919.0 36 153654.0 37 202027.0 38 251531.0 39 247678.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.1600811230229 21.611047401134737 14.233067211136078 22.995804264706283 2 19.25631755120138 23.84788338428611 34.553440201876995 22.342358862635514 3 19.817459513754514 24.726852979574186 32.80268548954351 22.653002017127797 4 14.143774410120125 16.557348558041003 35.743326646066606 33.55555038577227 5 12.421278645541108 39.00877464276037 34.61454247874079 13.955404232957733 6 32.410891942710286 37.34669691902204 13.36607174625244 16.87633939201524 7 25.9131129728413 33.19468430718366 21.268860965977048 19.62334175399799 8 27.329413117078253 34.34700619370448 18.719602814673305 19.603977874543958 9 24.634823234465788 14.442306587003348 21.656891214683156 39.2659789638477 10 16.779998959961244 27.83910053069346 32.87952519493884 22.501375314406452 11 33.11948676824378 22.788959714919905 23.07887051791193 21.012682998924383 12 21.13536651786814 27.703827068924465 30.496946938864877 20.663859474342516 13 31.622515196882073 21.092328072014475 25.978115395036827 21.30704133606663 14 20.488489781619233 23.376239493555865 27.773003330860963 28.36226739396394 15 22.72642054240758 29.850959709446016 25.554436449526648 21.86818329861976 16 21.610978977532426 28.41173765843485 26.72400108382986 23.25328228020286 17 21.775811435499808 27.033960002299036 27.02410700356624 24.16612155863492 18 22.861694004176577 25.70147877089315 29.486535603537227 21.95029162139305 19 22.87264178054635 25.09743520969097 30.607930021813445 21.421992987949235 20 23.59984782590846 24.76010685029737 30.46779848428036 21.172246839513807 21 22.505343883340494 25.55156265822958 30.9431372495354 20.99995620889452 22 21.21439577853743 26.038465012275193 30.49509950160248 22.252039707584892 23 22.117176787429763 26.162517003265172 31.375779686948334 20.34452652235673 24 22.140440812215527 26.287595348289823 28.973427009806468 22.59853682968818 25 21.907937411562493 26.512914270700193 30.098926844221353 21.48022147351596 26 21.658122839524758 27.149732737409373 30.18404580549633 21.00809861756954 27 20.893831201710043 27.131395211990007 29.692080104879697 22.282693481420253 28 21.208100807124815 26.765807904841925 29.91206198630981 22.114029301723452 29 21.57998308568551 26.750891559538115 29.321497874762915 22.347627480013465 30 21.49801161011684 26.87466985611885 30.960653691727043 20.66666484203727 31 21.99983030946627 26.686162831751837 30.686275046459627 20.62773181232227 32 21.532360258477002 26.522561998626053 29.739360814076647 22.205716928820294 33 21.166704527726612 26.53049913649414 30.407517290644304 21.895279045134945 34 20.595572719236063 26.93454050814104 30.92931568186857 21.54057109075433 35 20.282534738662893 28.770482605351823 29.853491382731523 21.09349127325376 36 22.338869258917647 26.583527428285226 29.76987774070739 21.30772557208974 37 21.269818896409404 27.256952522230826 29.67559001672273 21.79763856463704 38 21.112239340286994 25.836341691048275 31.052546589630815 21.998872379033912 39 20.612747043416142 25.792345314762255 31.782900120699235 21.812007521122368 40 19.589472070854008 26.41370004734913 31.442561122803948 22.554266758992913 41 20.843060888795225 25.36394514069261 31.504279212088537 22.28871475842363 42 19.780647615711153 27.12865826789756 30.87170300872264 22.218991107668643 43 20.065563495734473 26.96300472670245 30.119248654107743 22.85218312345534 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 121.0 1 204.0 2 287.0 3 678.5 4 1070.0 5 1070.0 6 1691.5 7 2313.0 8 2721.5 9 3130.0 10 4811.5 11 6493.0 12 6493.0 13 12687.5 14 18882.0 15 29845.5 16 40809.0 17 36597.0 18 32385.0 19 32385.0 20 33943.5 21 35502.0 22 28103.5 23 20705.0 24 22757.5 25 24810.0 26 24810.0 27 27261.5 28 29713.0 29 32074.0 30 34435.0 31 38558.5 32 42682.0 33 42682.0 34 47693.0 35 52704.0 36 57972.0 37 63240.0 38 67547.5 39 71855.0 40 71855.0 41 74242.5 42 76630.0 43 82358.0 44 88086.0 45 93522.5 46 98959.0 47 98959.0 48 125780.0 49 152601.0 50 142711.0 51 132821.0 52 121776.0 53 110731.0 54 110731.0 55 98916.0 56 87101.0 57 74997.0 58 62893.0 59 55820.0 60 48747.0 61 48747.0 62 43084.5 63 37422.0 64 32246.0 65 27070.0 66 23333.5 67 19597.0 68 19597.0 69 16803.0 70 14009.0 71 11739.5 72 9470.0 73 7746.5 74 6023.0 75 6023.0 76 4867.0 77 3711.0 78 2909.0 79 2107.0 80 1641.0 81 1175.0 82 1175.0 83 867.5 84 560.0 85 445.5 86 331.0 87 245.0 88 159.0 89 159.0 90 123.5 91 88.0 92 63.0 93 38.0 94 26.5 95 15.0 96 15.0 97 8.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1461484.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.625820977952635 #Duplication Level Percentage of deduplicated Percentage of total 1 83.50605167399434 45.61586629319277 2 9.646567768763633 10.539033679763406 3 2.7269452172769726 4.468848637669682 4 1.149805215367942 2.5123621541682186 5 0.634496543269948 1.7329947291896977 6 0.41382934922969433 1.3563460767866353 7 0.2904740731545233 1.1107169303212994 8 0.2133300740661946 0.9322664348122659 9 0.16650596590348277 0.8185972576684261 >10 1.0795754974799205 11.1524910768424 >50 0.0968059514527733 3.720129894859503 >100 0.06668010004029806 6.837697991189495 >500 0.005284055493148774 2.0355719061775144 >1k 0.0031452711268742696 3.288226254193907 >5k 1.258108450749708E-4 0.5100784863651544 >10k+ 3.774325352249124E-4 3.368772196799669 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19849 1.3581400822725394 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16008 1.095325025795698 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13161 0.9005230300160658 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7422 0.5078399763528031 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3835 0.2624045148629749 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3736 0.25563057823417845 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3418 0.23387187269925638 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3248 0.22223986030637352 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3195 0.21861340938388651 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3070 0.21006045909500204 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2153 0.14731601577574577 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2057 0.1407473499538825 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1892 0.129457455572555 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1830 0.12521519222926833 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1787 0.12227297732989209 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1722 0.11782544317967217 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1631 0.11159889536936429 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1505 0.10297752147816876 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 6.842360231107559E-5 0.0 0.0 0.0 0.0 3 6.842360231107559E-5 0.0 0.0 0.0 0.0 4 6.842360231107559E-5 0.0 0.0 6.842360231107559E-5 0.0 5 6.842360231107559E-5 0.0 0.0 1.3684720462215117E-4 0.0 6 6.842360231107559E-5 0.0 0.0 1.3684720462215117E-4 0.0 7 6.842360231107559E-5 0.0 0.0 1.3684720462215117E-4 0.0 8 6.842360231107559E-5 0.0 0.0 1.3684720462215117E-4 0.0 9 6.842360231107559E-5 0.0 0.0 4.1054161386645354E-4 0.0 10 6.842360231107559E-5 0.0 0.0 4.7896521617752914E-4 0.0 11 6.842360231107559E-5 0.0 0.0 5.473888184886047E-4 0.0 12 6.842360231107559E-5 0.0 0.0 7.526596254218315E-4 0.0 13 1.3684720462215117E-4 0.0 0.0 0.0010263540346661338 0.0 14 1.3684720462215117E-4 0.0 0.0 0.0012316248415993607 0.0 15 2.0527080693322677E-4 0.0 0.0 0.0013684720462215118 0.0 16 2.0527080693322677E-4 0.0 0.0 0.0024632496831987214 0.0 17 2.7369440924430234E-4 0.0 0.0 0.0036264509224870063 0.0 18 2.7369440924430234E-4 0.0 0.0 0.004105416138664535 0.0 19 2.7369440924430234E-4 0.0 0.0 0.005131770173330669 0.0 20 2.7369440924430234E-4 0.0 0.0 0.008005561470395843 0.0 21 2.7369440924430234E-4 0.0 0.0 0.01286363723448221 0.0 22 2.7369440924430234E-4 0.0 0.0 0.02080077510256698 0.0 23 2.7369440924430234E-4 0.0 0.0 0.026890475708252707 0.0 24 2.7369440924430234E-4 0.0 0.0 0.03523815519020393 0.0 25 2.7369440924430234E-4 0.0 0.0 0.04002780735197922 0.0 26 2.7369440924430234E-4 0.0 0.0 0.049949229687085185 0.0 27 2.7369440924430234E-4 0.0 0.0 0.10653554879834469 0.0 28 2.7369440924430234E-4 0.0 0.0 0.23195601183454626 0.0 29 2.7369440924430234E-4 0.0 0.0 0.39035665118468627 0.0 30 2.7369440924430234E-4 0.0 0.0 0.6123912406841265 0.0 31 2.7369440924430234E-4 0.0 0.0 0.8747273319447904 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5705 0.0 22.537249 1 TAAGCGA 45 0.0038262974 20.555557 5 CCGTATA 70 1.2194851E-4 18.5 2 TAAGAGT 110 3.853711E-8 18.5 4 CGTATAC 50 0.0070357746 18.499998 3 TAGCGAA 250 0.0 17.02 10 GGACCCT 915 0.0 16.983606 6 GTTATCG 90 4.447285E-5 16.444445 11 GTCGGGT 180 1.0913936E-11 16.444445 24 TTCGTTA 135 2.2206223E-8 16.444443 30 GTATTGG 680 0.0 16.32353 1 GTTCCGA 170 8.54925E-11 16.32353 33 TTGGACC 900 0.0 16.033333 4 TCGGGTA 185 1.8189894E-11 16.0 25 GTATTAG 315 0.0 15.857143 1 TAATACT 365 0.0 15.712329 4 CTTAGAC 95 7.061772E-5 15.578948 3 CTCTAAT 380 0.0 15.578948 1 ACCGTTA 275 0.0 15.472727 8 TGGACCC 970 0.0 15.257732 5 >>END_MODULE