##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088465_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2221879 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.125810181382516 31.0 31.0 33.0 30.0 34.0 2 31.273536497712072 31.0 31.0 34.0 30.0 34.0 3 31.400870614466406 31.0 31.0 34.0 28.0 34.0 4 35.15371089064706 35.0 35.0 37.0 33.0 37.0 5 34.98913532195048 35.0 35.0 37.0 32.0 37.0 6 35.086292727911825 36.0 35.0 37.0 32.0 37.0 7 34.91836774189774 36.0 35.0 37.0 32.0 37.0 8 34.965414408255356 36.0 35.0 37.0 32.0 37.0 9 36.470741205979266 38.0 35.0 39.0 32.0 39.0 10 36.27248063463402 38.0 35.0 39.0 32.0 39.0 11 36.32036037966064 38.0 35.0 39.0 32.0 39.0 12 36.15017694482913 38.0 35.0 39.0 31.0 39.0 13 36.19223639091057 38.0 35.0 39.0 32.0 39.0 14 37.07845386719979 39.0 36.0 40.0 31.0 41.0 15 37.10382113517433 39.0 36.0 40.0 31.0 41.0 16 36.94716138907654 38.0 36.0 40.0 31.0 41.0 17 37.01127424130657 38.0 36.0 40.0 31.0 41.0 18 36.87516691953072 38.0 36.0 40.0 31.0 41.0 19 36.958715573620346 39.0 36.0 40.0 31.0 41.0 20 36.85713353427437 39.0 36.0 40.0 31.0 41.0 21 36.69411340581553 39.0 35.0 40.0 30.0 41.0 22 36.581332736841205 38.0 35.0 40.0 30.0 41.0 23 36.37843824978768 38.0 35.0 40.0 30.0 41.0 24 36.5996294127628 38.0 35.0 40.0 30.0 41.0 25 36.56230109740449 38.0 35.0 40.0 30.0 41.0 26 36.336877030657384 38.0 35.0 40.0 30.0 41.0 27 36.26778911002804 38.0 35.0 40.0 30.0 41.0 28 36.06140658424694 38.0 35.0 40.0 29.0 41.0 29 35.89096750993191 38.0 34.0 40.0 28.0 41.0 30 35.72182508588452 38.0 34.0 40.0 27.0 41.0 31 35.44562777721019 38.0 34.0 40.0 27.0 41.0 32 35.30545182703469 38.0 34.0 40.0 26.0 41.0 33 35.11313307340319 38.0 33.0 40.0 26.0 41.0 34 34.991325360201884 38.0 33.0 40.0 25.0 41.0 35 34.73669268218476 38.0 33.0 40.0 25.0 41.0 36 34.595748913419676 38.0 33.0 40.0 24.0 41.0 37 34.4442442635265 37.0 33.0 40.0 24.0 41.0 38 34.348209781000676 37.0 33.0 40.0 24.0 41.0 39 34.25494727660687 37.0 33.0 40.0 23.0 41.0 40 34.12681023584093 37.0 33.0 40.0 23.0 41.0 41 33.90427471522977 37.0 33.0 40.0 21.0 41.0 42 33.6835885302485 37.0 32.0 40.0 20.0 41.0 43 33.34357676543142 37.0 31.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 3.0 13 3.0 14 13.0 15 16.0 16 41.0 17 135.0 18 331.0 19 707.0 20 1435.0 21 2905.0 22 5115.0 23 8551.0 24 13006.0 25 19554.0 26 27432.0 27 37468.0 28 49502.0 29 62239.0 30 77705.0 31 94416.0 32 112995.0 33 136428.0 34 162524.0 35 195276.0 36 241247.0 37 307704.0 38 387230.0 39 277896.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.01248492829718 22.581247673703203 14.077319241956921 23.3289481560427 2 19.959007668734436 24.16778771481255 33.56757951265573 22.30562510379728 3 20.36983112041655 25.00284668967122 32.18856652409965 22.438755665812586 4 14.798645650820768 17.209172956763172 35.58564620305606 32.40653518936 5 12.641237439122472 39.04852604484763 34.77084035629303 13.53939615973687 6 32.665010110811615 37.709119173456344 13.434980032666044 16.190890683066 7 26.44986518167731 32.75263864503873 21.293958851944684 19.50353732133928 8 27.396721423623877 34.51790128985422 18.68999166921331 19.395385617308595 9 24.859319521900158 14.144154564672515 21.111545678230005 39.884980235197325 10 16.47677483787371 27.827257919985744 33.512130948625014 22.183836293515533 11 33.998296036822886 22.395548992541897 22.94206840246476 20.664086568170454 12 21.056457169809878 27.21331809698008 30.595275440291754 21.134949292918293 13 31.609192039710532 20.79190630992957 25.79100842125066 21.807893229109236 14 20.739293183832245 22.727025189040447 27.24257261534044 29.29110901178687 15 23.15184580258421 29.622900256944686 24.812872348134167 22.412381592336935 16 22.351847242806652 28.082672368747353 26.155609733923402 23.409870654522592 17 22.18302616839171 26.88683767207845 26.783501711839392 24.146634447690445 18 23.034782722191444 25.69334333687838 28.88996205463934 22.381911886290837 19 23.0699331511752 24.988084409637068 29.909324495168278 22.032657944019455 20 23.827895218416483 24.76593009790362 29.696531629310147 21.70964305436975 21 23.048959911858386 25.451475980465183 29.96045239187192 21.539111715804506 22 21.872163155599385 25.84857231199359 29.66457669387037 22.61468783853666 23 22.733146134420462 26.027519950456345 30.347827221914425 20.89150669320877 24 22.60573145522326 26.053173912710818 28.207071582205874 23.13402304986005 25 22.687104023216385 26.053849016980674 29.249972658277073 22.00907430152587 26 22.44019588825494 26.77801086377791 29.201680199506814 21.580113048460333 27 21.70406219240562 26.763833674110966 28.800578249310604 22.73152588417281 28 22.014700170441326 26.513324983043628 29.103114976108056 22.368859870406986 29 22.339110275582065 26.448424959234956 28.532021770762494 22.68044299442049 30 22.16443829749505 26.54676514787709 29.90995459248681 21.378841962141053 31 22.667661020244577 26.44414929885921 29.757471041402344 21.13071863949387 32 22.248556289518916 26.243058240345224 28.897433208559065 22.6109522615768 33 22.027212102909292 26.37191314198478 29.3822030812659 22.218671673840024 34 21.535511159698615 26.836519900498633 29.732132127807137 21.89583681199561 35 21.1633486792035 28.53530727820912 28.872319329720476 21.4290247128669 36 23.01804013629905 26.523811602702036 28.69728729602287 21.76086096497604 37 22.116550901286704 27.128164945075767 28.672758507551492 22.082525646086037 38 22.035493381952843 25.898845076622084 29.884345637183664 22.181315904241412 39 21.502566071329717 25.97630203985005 30.474431775987803 22.046700112832426 40 20.73470247479723 26.478714637475758 30.090432467294576 22.69615042043244 41 21.84511397785388 25.41403019696392 30.198764199130558 22.542091626051644 42 20.81670514010889 27.018753046408015 29.631046515134262 22.53349529834883 43 21.153357136009657 26.596362808235728 29.121477812248102 23.12880224350651 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 131.0 1 238.0 2 345.0 3 667.0 4 989.0 5 989.0 6 1694.0 7 2399.0 8 2928.0 9 3457.0 10 5391.5 11 7326.0 12 7326.0 13 14743.0 14 22160.0 15 35857.5 16 49555.0 17 44869.5 18 40184.0 19 40184.0 20 44318.5 21 48453.0 22 39479.0 23 30505.0 24 34292.0 25 38079.0 26 38079.0 27 42061.0 28 46043.0 29 50365.5 30 54688.0 31 61248.0 32 67808.0 33 67808.0 34 76272.5 35 84737.0 36 92777.5 37 100818.0 38 107090.0 39 113362.0 40 113362.0 41 117347.5 42 121333.0 43 127673.0 44 134013.0 45 140286.0 46 146559.0 47 146559.0 48 179923.0 49 213287.0 50 203638.0 51 193989.0 52 180787.5 53 167586.0 54 167586.0 55 151370.5 56 135155.0 57 118310.5 58 101466.0 59 91104.5 60 80743.0 61 80743.0 62 72509.5 63 64276.0 64 56154.0 65 48032.0 66 41403.5 67 34775.0 68 34775.0 69 30070.0 70 25365.0 71 21337.5 72 17310.0 73 14281.5 74 11253.0 75 11253.0 76 9093.5 77 6934.0 78 5467.5 79 4001.0 80 3149.0 81 2297.0 82 2297.0 83 1739.5 84 1182.0 85 918.0 86 654.0 87 491.5 88 329.0 89 329.0 90 257.5 91 186.0 92 130.0 93 74.0 94 51.5 95 29.0 96 29.0 97 19.0 98 9.0 99 6.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2221879.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.144615651830385 #Duplication Level Percentage of deduplicated Percentage of total 1 81.8700815790537 43.50954018902809 2 10.492823419218386 11.152741354337717 3 3.1709718339055053 5.055602380670634 4 1.2955613549850007 2.7540844105616977 5 0.73648756773327 1.9570174359768013 6 0.43209063523150365 1.3777974441680103 7 0.31533061252303946 1.1730686944055229 8 0.24169099877727696 1.0275660189220313 9 0.15382916858351603 0.7357672836370424 >10 1.105746598104442 11.225169429008867 >50 0.10408878076088846 3.790443600676844 >100 0.07176588061159024 7.317299406803988 >500 0.0058721282617863356 2.1846849080202753 >1k 0.003233925709389573 3.3174610384913676 >5k 1.7020661628366172E-4 0.6574769068377507 >10k+ 2.553099244254926E-4 2.7642794984533596 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24732 1.113111920136065 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 21006 0.9454160195042125 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15381 0.6922519183087829 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8973 0.40384737422694933 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5564 0.2504186771646881 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4941 0.22237934649006538 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 4908 0.22089411709638554 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4575 0.2059068023056161 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 4436 0.19965083607163125 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3545 0.1595496424422752 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2656 0.11953846271556642 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2581 0.11616294136629403 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2472 0.11125718367201813 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2247 0.10113061962420096 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.500695132363193E-5 2 0.0 0.0 0.0 0.0 4.500695132363193E-5 3 0.0 0.0 0.0 0.0 4.500695132363193E-5 4 0.0 0.0 0.0 0.0 4.500695132363193E-5 5 0.0 0.0 0.0 0.0 9.001390264726387E-5 6 0.0 0.0 0.0 0.0 9.001390264726387E-5 7 0.0 0.0 0.0 4.500695132363193E-5 9.001390264726387E-5 8 0.0 0.0 0.0 4.500695132363193E-5 9.001390264726387E-5 9 0.0 0.0 0.0 9.001390264726387E-5 9.001390264726387E-5 10 9.001390264726387E-5 0.0 0.0 9.001390264726387E-5 9.001390264726387E-5 11 9.001390264726387E-5 0.0 0.0 1.350208539708958E-4 9.001390264726387E-5 12 9.001390264726387E-5 0.0 0.0 2.700417079417916E-4 9.001390264726387E-5 13 9.001390264726387E-5 0.0 0.0 3.1504865926542357E-4 9.001390264726387E-5 14 9.001390264726387E-5 0.0 0.0 4.950764645599513E-4 9.001390264726387E-5 15 9.001390264726387E-5 0.0 0.0 5.850903672072152E-4 1.350208539708958E-4 16 9.001390264726387E-5 0.0 0.0 6.300973185308471E-4 1.350208539708958E-4 17 9.001390264726387E-5 0.0 0.0 0.0010351598804435346 1.350208539708958E-4 18 9.001390264726387E-5 0.0 0.0 0.001350208539708958 1.350208539708958E-4 19 1.350208539708958E-4 0.0 0.0 0.0019352989069161732 1.350208539708958E-4 20 1.350208539708958E-4 0.0 0.0 0.0030604726900069715 1.350208539708958E-4 21 1.350208539708958E-4 0.0 0.0 0.006210959282661207 1.350208539708958E-4 22 2.250347566181597E-4 0.0 0.0 0.01021657795046445 1.350208539708958E-4 23 2.250347566181597E-4 0.0 0.0 0.01210686990605699 1.350208539708958E-4 24 2.250347566181597E-4 0.0 0.0 0.015932460768565707 1.350208539708958E-4 25 2.250347566181597E-4 0.0 0.0 0.01836283614004183 1.350208539708958E-4 26 2.250347566181597E-4 0.0 0.0 0.023808677250201294 1.350208539708958E-4 27 2.250347566181597E-4 0.0 0.0 0.058959106233957836 1.350208539708958E-4 28 2.250347566181597E-4 0.0 0.0 0.1320503951835361 1.350208539708958E-4 29 2.250347566181597E-4 0.0 0.0 0.22440465929962883 1.350208539708958E-4 30 2.250347566181597E-4 0.0 0.0 0.35361961654977614 1.350208539708958E-4 31 2.250347566181597E-4 0.0 0.0 0.49359123516627146 1.8002780529452773E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6445 0.0 23.82467 1 TTCGTTA 170 5.456968E-12 17.411764 30 CGTTAAC 65 0.001580561 17.076923 10 GTATCAA 9555 0.0 16.012035 2 CTAATAC 555 0.0 15.999999 3 TAATACT 635 0.0 15.732285 4 GTATTAG 550 0.0 15.136363 1 GTATTGG 820 0.0 14.890244 1 ACGTTCG 175 2.240995E-9 14.8 22 TTAACGG 315 0.0 14.682539 35 TTAGACT 255 0.0 14.509804 4 ACGGGTA 195 6.730261E-10 14.23077 5 TTGGACC 1300 0.0 14.230769 4 CTCTAAT 445 0.0 14.134832 1 ATTGGAC 1105 0.0 14.063348 3 GTACACT 135 6.5731E-6 13.703704 4 TCTATAC 205 1.4260877E-9 13.536585 3 TGCGGTA 165 2.5980626E-7 13.454545 36 CGTTCGC 220 2.8558134E-10 13.454545 23 TACCCCG 400 0.0 13.4125 5 >>END_MODULE