##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088462_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2550522 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.406074129139053 31.0 31.0 34.0 30.0 34.0 2 31.536587020225664 31.0 31.0 34.0 30.0 34.0 3 31.675198645610585 31.0 31.0 34.0 30.0 34.0 4 35.3802790173933 37.0 35.0 37.0 33.0 37.0 5 35.25443811110039 37.0 35.0 37.0 33.0 37.0 6 35.3327957963115 37.0 35.0 37.0 33.0 37.0 7 35.164789403894574 37.0 35.0 37.0 32.0 37.0 8 35.21848272628113 37.0 35.0 37.0 32.0 37.0 9 36.75484626284345 39.0 35.0 39.0 32.0 39.0 10 36.611918266143164 39.0 35.0 39.0 32.0 39.0 11 36.63896096563762 39.0 35.0 39.0 32.0 39.0 12 36.48805969915178 38.0 35.0 39.0 32.0 39.0 13 36.521860230964485 38.0 35.0 39.0 32.0 39.0 14 37.45000003920766 39.0 36.0 41.0 32.0 41.0 15 37.48363158600475 39.0 36.0 41.0 32.0 41.0 16 37.347983667657054 39.0 36.0 41.0 32.0 41.0 17 37.433753168959136 39.0 36.0 41.0 32.0 41.0 18 37.30434593389118 39.0 36.0 41.0 32.0 41.0 19 37.38571751194461 39.0 36.0 41.0 32.0 41.0 20 37.29481886453048 39.0 36.0 41.0 31.0 41.0 21 37.14509657238793 39.0 36.0 40.0 31.0 41.0 22 37.041224502278354 39.0 36.0 40.0 31.0 41.0 23 36.83346193445891 39.0 35.0 40.0 30.0 41.0 24 37.037039868701385 39.0 36.0 40.0 31.0 41.0 25 37.00040462305363 39.0 36.0 41.0 31.0 41.0 26 36.8001091541261 39.0 36.0 40.0 30.0 41.0 27 36.729231898411385 39.0 35.0 40.0 30.0 41.0 28 36.528997985510415 39.0 35.0 40.0 30.0 41.0 29 36.355630337632846 38.0 35.0 40.0 30.0 41.0 30 36.160960775872546 38.0 35.0 40.0 30.0 41.0 31 35.87178467780321 38.0 35.0 40.0 29.0 41.0 32 35.73008740955773 38.0 34.0 40.0 28.0 41.0 33 35.511053423573685 38.0 34.0 40.0 27.0 41.0 34 35.388768259987565 38.0 34.0 40.0 27.0 41.0 35 35.13162207579468 38.0 34.0 40.0 26.0 41.0 36 34.96177331542327 38.0 33.0 40.0 25.0 41.0 37 34.794484815265264 38.0 33.0 40.0 24.0 41.0 38 34.6880862035301 38.0 33.0 40.0 24.0 41.0 39 34.56676398007937 38.0 33.0 40.0 23.0 41.0 40 34.411964295936286 38.0 33.0 40.0 23.0 41.0 41 34.17899433919801 38.0 33.0 40.0 22.0 41.0 42 33.919134984916816 37.0 33.0 40.0 20.0 41.0 43 33.57091254260892 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 5.0 14 11.0 15 26.0 16 58.0 17 92.0 18 282.0 19 602.0 20 1245.0 21 2555.0 22 4588.0 23 7951.0 24 12555.0 25 18696.0 26 27272.0 27 36439.0 28 49301.0 29 63654.0 30 79431.0 31 97673.0 32 119050.0 33 144558.0 34 174879.0 35 211681.0 36 268081.0 37 353265.0 38 442710.0 39 433860.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.44030124029513 21.266430950213326 14.026462034046364 23.266805775445185 2 19.319417750562433 23.82128050650024 34.371081684455184 22.48822005848215 3 19.989476663992704 24.55391484566689 32.75925477216037 22.697353718180043 4 14.122560009284374 16.42800963881119 35.62286465280441 33.82656569910002 5 12.63423722673241 38.69023674369404 34.55237790538565 14.123148124187912 6 32.55106209630813 37.01140394005619 13.25807030874464 17.179463654891038 7 26.12453450705385 33.04703899829133 21.03251804924639 19.79590844540843 8 27.78866443810326 33.88890587887499 18.525305800146008 19.79712388287574 9 24.777241678370153 14.294877676020832 21.48360218025957 39.44427846534945 10 16.792327217722487 27.556633504827637 32.88518977683784 22.76584950061203 11 33.40861204098612 22.3858488576064 23.18831203965306 21.01722706175442 12 21.388405981206983 27.229955279742736 30.51269504830776 20.868943690742523 13 32.19748741630145 20.768807326500223 25.82138087811044 21.21232437908789 14 20.691176159233287 23.181685945073205 27.434619266173748 28.69251862951976 15 22.94067645760358 29.51137061354499 25.219425670509803 22.328527258341627 16 21.977030584327444 28.14815947480555 26.386324054448462 23.488485886418545 17 22.096339494425063 26.710257743316856 26.637370702938455 24.55603205931962 18 23.382233127179454 25.22279752929008 29.131840462462193 22.263128881068265 19 23.150476647525487 24.619509261241422 30.391739416480235 21.838274674752856 20 24.04805761330426 24.17238510391206 30.156493455065274 21.623063827718404 21 22.851282992265897 25.061183553798006 30.750881584240403 21.336651869695693 22 21.540022003338922 25.498937080331007 30.34708189147163 22.613959024858442 23 22.6002363437759 25.697876748367587 31.100653121204207 20.6012337866523 24 22.41611717130846 25.703483443781312 28.813356638366578 23.06704274654365 25 22.371381230979384 25.95931342682008 29.87466879329016 21.79463654891038 26 22.145819561642675 26.633253898613695 29.820013314921418 21.40091322482221 27 21.040359581293554 26.706415392613746 29.5550479470477 22.698177079044996 28 21.676307830318656 26.379423506246958 29.430955702401313 22.513312961033076 29 21.84141128757172 26.279287142004655 28.979126625843648 22.900174944579973 30 21.748763586434464 26.572717271209576 30.684032523538317 20.994486618817636 31 22.477516367237765 26.20173439005819 30.476663208551035 20.84408603415301 32 22.217099087951407 26.13845322643757 29.225938847028175 22.418508838582845 33 21.69516671489209 26.243568963529817 29.89599776045845 22.165266561119644 34 20.89658509120878 26.746367998394057 30.43945513898724 21.91759177140993 35 20.47894509437676 28.796771798086823 29.540149036158088 21.18413407137833 36 22.666536497234684 26.37558115554385 29.386023723771054 21.571858623450417 37 21.727434619266173 27.14460020340934 29.28263312372918 21.845332053595303 38 21.56468362162726 25.693955982344008 30.637571446158862 22.10378894986987 39 21.13641834887133 25.4511037348433 31.37322477516367 22.0392531411217 40 20.04664143261654 26.062468780900538 31.0381561107883 22.852733675694623 41 21.30830473134519 25.023622615292084 31.110062959660805 22.558009693701916 42 20.08392791750081 26.8922989097918 30.540218825793307 22.483554346914083 43 20.39821652195119 26.772597923091823 29.801468091629868 23.027717463327114 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 171.0 1 337.5 2 504.0 3 1083.5 4 1663.0 5 1663.0 6 2849.5 7 4036.0 8 4524.5 9 5013.0 10 7893.5 11 10774.0 12 10774.0 13 21074.0 14 31374.0 15 49566.0 16 67758.0 17 61481.0 18 55204.0 19 55204.0 20 58587.0 21 61970.0 22 48749.0 23 35528.0 24 39216.0 25 42904.0 26 42904.0 27 46621.0 28 50338.0 29 54339.0 30 58340.0 31 63801.0 32 69262.0 33 69262.0 34 77110.5 35 84959.0 36 93575.0 37 102191.0 38 109377.5 39 116564.0 40 116564.0 41 121320.5 42 126077.0 43 134488.0 44 142899.0 45 155275.5 46 167652.0 47 167652.0 48 219591.0 49 271530.0 50 256064.0 51 240598.0 52 221828.5 53 203059.0 54 203059.0 55 180614.0 56 158169.0 57 137042.5 58 115916.0 59 103033.0 60 90150.0 61 90150.0 62 79967.5 63 69785.0 64 61002.0 65 52219.0 66 45008.5 67 37798.0 68 37798.0 69 32741.5 70 27685.0 71 23535.5 72 19386.0 73 15896.0 74 12406.0 75 12406.0 76 9862.0 77 7318.0 78 5761.5 79 4205.0 80 3340.5 81 2476.0 82 2476.0 83 1865.5 84 1255.0 85 978.0 86 701.0 87 512.0 88 323.0 89 323.0 90 266.0 91 209.0 92 153.0 93 97.0 94 64.5 95 32.0 96 32.0 97 24.5 98 17.0 99 12.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2550522.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.99256894060688 #Duplication Level Percentage of deduplicated Percentage of total 1 79.5311449268134 38.96435100752302 2 11.437537872509504 11.20708725459448 3 3.7454183242362062 5.504929963846639 4 1.5990939686457748 3.1337488600554715 5 0.8591264147206642 2.1045405050949277 6 0.5521547262813101 1.6230887095931406 7 0.38132217672947527 1.307736712240077 8 0.25146693043828605 0.985600874062442 9 0.19816058142277282 0.8737556351999347 >10 1.2317013172706048 11.588831301759777 >50 0.12331289022646476 4.233424538874308 >100 0.07916701903112087 7.392995224632566 >500 0.00523670820798404 1.7488299265463976 >1k 0.004350496049709543 3.890472623738099 >5k 4.833884499677269E-4 1.5787505225359302 >10k+ 3.222589666451513E-4 3.861856339702934 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 33959 1.3314529339484231 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 28730 1.1264360785752876 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22617 0.886759651553682 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12535 0.49146802105608184 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7696 0.3017421531749187 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 7102 0.27845280299483793 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6990 0.2740615450484254 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 6422 0.2517915940344761 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6015 0.2358340763184948 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 5773 0.22634582254142482 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3792 0.14867544761425308 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 3634 0.14248063729699253 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3582 0.14044183896472956 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 3463 0.13577612739666625 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3243 0.1271504421447845 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3183 0.1247979825306349 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2859 0.1120947006142272 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2792 0.10946778737842686 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2551 0.10001874126159274 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.9207660235826235E-5 0.0 3 0.0 0.0 0.0 3.9207660235826235E-5 0.0 4 0.0 0.0 0.0 3.9207660235826235E-5 0.0 5 0.0 0.0 0.0 3.9207660235826235E-5 0.0 6 0.0 0.0 0.0 3.9207660235826235E-5 0.0 7 0.0 0.0 0.0 7.841532047165247E-5 0.0 8 0.0 0.0 0.0 7.841532047165247E-5 0.0 9 0.0 0.0 0.0 7.841532047165247E-5 0.0 10 0.0 0.0 0.0 1.9603830117913116E-4 0.0 11 0.0 0.0 0.0 3.528689421224361E-4 0.0 12 0.0 0.0 0.0 5.489072433015673E-4 0.0 13 0.0 0.0 0.0 5.881149035373935E-4 0.0 14 3.9207660235826235E-5 0.0 0.0 6.66530224009046E-4 0.0 15 3.9207660235826235E-5 0.0 0.0 9.017761854240034E-4 0.0 16 7.841532047165247E-5 0.0 0.0 0.0013722681082539183 0.0 17 7.841532047165247E-5 0.0 0.0 0.0021956289732062693 0.0 18 7.841532047165247E-5 0.0 0.0 0.002666120896036184 0.0 19 1.5683064094330494E-4 0.0 0.0 0.0036855200621676663 0.0 20 1.5683064094330494E-4 0.0 0.0 0.00666530224009046 0.0 21 1.5683064094330494E-4 0.0 0.0 0.011174183167210477 0.0 22 1.5683064094330494E-4 0.0 0.0 0.01736899348447102 0.0 23 1.5683064094330494E-4 0.0 0.0 0.021015305886402862 0.0 24 1.5683064094330494E-4 0.0 0.0 0.02666120896036184 0.0 25 1.5683064094330494E-4 0.0 0.0 0.030778013285123595 0.0 26 1.5683064094330494E-4 0.0 0.0 0.039442906197241195 0.0 27 1.5683064094330494E-4 0.0 0.0 0.09707816674390576 0.0 28 1.5683064094330494E-4 0.0 0.0 0.21187819591440496 0.0 29 1.5683064094330494E-4 0.0 0.0 0.3647880708341273 0.0 30 1.5683064094330494E-4 0.0 0.0 0.5725886700840064 0.0 31 1.5683064094330494E-4 0.0 0.0 0.7896030694893046 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 9795 0.0 23.080143 1 GTATTGG 1130 0.0 18.172567 1 ATTGGAC 1235 0.0 16.327934 3 TATACTG 330 0.0 16.257576 5 TTGGACC 1525 0.0 15.64918 4 TATTGGA 1330 0.0 15.022557 2 TTCGTTA 260 0.0 14.942307 30 ACCGTTA 520 0.0 14.942307 8 GTATCAA 15205 0.0 14.831634 2 CGAACTA 275 0.0 14.8 24 GCGCGTA 75 0.0041062315 14.799999 11 CTAATAC 430 0.0 14.627907 3 CCGTTTA 510 0.0 14.509804 27 TGGACCC 1575 0.0 14.4476185 5 ACGTTCG 275 0.0 14.127274 22 TACACCG 265 0.0 13.962264 5 TTGCGAC 120 3.3034605E-5 13.875001 15 GGTCTAG 120 3.3034605E-5 13.875001 1 GTATACT 215 1.9826984E-10 13.767442 4 TAGTACC 230 4.0017767E-11 13.673913 4 >>END_MODULE