##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088459_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1301387 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.388774438349238 31.0 31.0 34.0 30.0 34.0 2 31.52446274628531 31.0 31.0 34.0 30.0 34.0 3 31.665231018905214 31.0 31.0 34.0 30.0 34.0 4 35.38369293684354 37.0 35.0 37.0 33.0 37.0 5 35.24742985752893 37.0 35.0 37.0 33.0 37.0 6 35.32117271803084 37.0 35.0 37.0 33.0 37.0 7 35.155467973784894 37.0 35.0 37.0 32.0 37.0 8 35.19568737047473 37.0 35.0 37.0 32.0 37.0 9 36.743409147317436 39.0 35.0 39.0 32.0 39.0 10 36.584373441566576 38.0 35.0 39.0 32.0 39.0 11 36.61542262217158 38.0 35.0 39.0 32.0 39.0 12 36.469139464279266 38.0 35.0 39.0 32.0 39.0 13 36.48773193523525 38.0 35.0 39.0 32.0 39.0 14 37.438987787645026 39.0 36.0 41.0 32.0 41.0 15 37.45829718600232 39.0 36.0 41.0 32.0 41.0 16 37.326130505376184 39.0 36.0 41.0 32.0 41.0 17 37.38581067737729 39.0 36.0 41.0 32.0 41.0 18 37.25863636258853 39.0 36.0 40.0 31.0 41.0 19 37.336404159562065 39.0 36.0 40.0 31.0 41.0 20 37.243282743718815 39.0 36.0 40.0 31.0 41.0 21 37.08259418604919 39.0 36.0 40.0 31.0 41.0 22 36.97584884434838 39.0 36.0 40.0 31.0 41.0 23 36.775056151628995 39.0 35.0 40.0 30.0 41.0 24 36.9934008868999 39.0 36.0 40.0 31.0 41.0 25 36.95322836327703 39.0 36.0 40.0 31.0 41.0 26 36.75508976192324 39.0 35.0 40.0 30.0 41.0 27 36.69306824180663 39.0 35.0 40.0 30.0 41.0 28 36.50673243239713 39.0 35.0 40.0 30.0 41.0 29 36.3261036109935 38.0 35.0 40.0 30.0 41.0 30 36.14050701290239 38.0 35.0 40.0 29.0 41.0 31 35.879986506704 38.0 35.0 40.0 28.0 41.0 32 35.738164742693755 38.0 34.0 40.0 28.0 41.0 33 35.55200413097718 38.0 34.0 40.0 27.0 41.0 34 35.42609154694184 38.0 34.0 40.0 27.0 41.0 35 35.18574490140135 38.0 34.0 40.0 26.0 41.0 36 35.02335123986946 38.0 33.0 40.0 25.0 41.0 37 34.85943228263383 38.0 33.0 40.0 25.0 41.0 38 34.762485717161766 38.0 33.0 40.0 24.0 41.0 39 34.660288599778546 38.0 33.0 40.0 24.0 41.0 40 34.53112871113666 38.0 33.0 40.0 23.0 41.0 41 34.31939461512986 38.0 33.0 40.0 22.0 41.0 42 34.09178053876364 38.0 33.0 40.0 21.0 41.0 43 33.74720202368704 37.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 2.0 14 5.0 15 14.0 16 22.0 17 43.0 18 152.0 19 289.0 20 638.0 21 1390.0 22 2362.0 23 3923.0 24 6170.0 25 9550.0 26 13317.0 27 18736.0 28 24981.0 29 32417.0 30 40227.0 31 49519.0 32 61205.0 33 74565.0 34 89439.0 35 108867.0 36 137412.0 37 178530.0 38 227781.0 39 219829.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.270506006284066 21.3673565203894 13.772613373270213 23.589524100056323 2 19.35826929268542 23.713776148063566 34.227481909685594 22.700472649565427 3 19.831687269044487 24.60836015727835 32.41533840433322 23.14461416934394 4 14.098112244858754 16.57631434769212 35.986144014040406 33.33942939340873 5 12.656573332913268 38.66259613781297 34.80678691273234 13.874043616541428 6 32.65615839100898 37.31103814622399 13.562452982855982 16.47035047991105 7 26.39184193479726 32.796393386440776 21.264158931970275 19.547605746791692 8 27.358656571796093 34.13527259762085 18.83236884954283 19.673701981040228 9 25.02545361218454 14.2833761210155 21.122771320137666 39.56839894666229 10 16.625800011833526 27.61715000995092 33.171531604357504 22.585518373858047 11 33.70327197059753 22.5658470539509 23.043337608259495 20.68754336719208 12 21.295817462445836 27.287117513852525 30.389192453897262 21.02787256980437 13 31.60727746627252 20.928593877147996 25.68674806187552 21.777380594703956 14 20.84330026348811 22.953126164622823 27.101238908948684 29.102334662940386 15 23.06784991705004 29.616478418794717 24.90873199132925 22.40693967282599 16 22.249184908101892 28.220352593041113 26.115137157509643 23.415325341347348 17 22.19547298382418 26.829144597264303 26.616141086394745 24.359241332516767 18 23.165591787838668 25.62673516794005 28.918069720997675 22.289603323223606 19 23.15867608943381 25.042666017103294 29.8843464703428 21.914311423120104 20 23.97980001337035 24.799002909972206 29.584819888319153 21.636377188338287 21 22.937757945945364 25.45829949123512 29.921383877355467 21.68255868546405 22 21.939438460657744 25.906744112243324 29.524960676570462 22.628856750528474 23 22.71699348464369 26.035452943667025 30.297521029486234 20.95003254220305 24 22.63062409567638 26.047824359702382 28.216664220558528 23.104887324062712 25 22.58536469167127 26.173075341923656 29.300892048253136 21.94066791815194 26 22.282841307005526 26.763138098044625 29.331090597954336 21.622929996995513 27 21.494835894318907 26.846894889836765 28.944042010562576 22.71422720528175 28 21.987310461838025 26.529003286493563 28.927982222044633 22.555704029623776 29 22.132002240686283 26.646185953909175 28.511887701352478 22.709924104052064 30 22.024732074317633 26.782502053578224 29.99177031889822 21.200995553205924 31 22.5972750611463 26.550134587175066 29.7749247533593 21.07766559831933 32 22.14168421845308 26.44793593296998 28.85260110943171 22.557778739145235 33 21.893103281345212 26.39122720605016 29.39548343421288 22.320186078391746 34 21.328935973695756 26.705737801284325 29.89187689749475 22.07344932752517 35 20.97608167286134 28.424673060357907 29.06998456262434 21.52926070415641 36 22.90448575250867 26.41958156951007 28.84084442214345 21.83508825583781 37 21.919382935283664 27.001499169731986 28.872195588245464 22.20692230673889 38 21.777534276890734 25.728011729024498 30.191326638425004 22.30312735565977 39 21.283215523130323 25.620280516095516 30.897496286654164 22.199007674119997 40 20.496362726844513 26.067726202889684 30.552787141718795 22.883123928547004 41 21.50351893787167 25.018922119246618 30.721453341703892 22.75610560117782 42 20.33622588822541 26.702510475362057 30.26839825509245 22.692865381320086 43 20.638211385237444 26.44163496331222 29.71521922379738 23.204934427652958 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 94.0 1 154.5 2 215.0 3 508.5 4 802.0 5 802.0 6 1258.5 7 1715.0 8 1980.0 9 2245.0 10 3544.0 11 4843.0 12 4843.0 13 9368.5 14 13894.0 15 21956.5 16 30019.0 17 27259.0 18 24499.0 19 24499.0 20 26226.0 21 27953.0 22 22920.0 23 17887.0 24 20037.0 25 22187.0 26 22187.0 27 24376.0 28 26565.0 29 29024.0 30 31483.0 31 34929.5 32 38376.0 33 38376.0 34 42837.5 35 47299.0 36 51877.0 37 56455.0 38 60366.0 39 64277.0 40 64277.0 41 66730.0 42 69183.0 43 73674.5 44 78166.0 45 82071.0 46 85976.0 47 85976.0 48 107375.0 49 128774.0 50 122305.5 51 115837.0 52 107574.0 53 99311.0 54 99311.0 55 89795.0 56 80279.0 57 69856.5 58 59434.0 59 53509.0 60 47584.0 61 47584.0 62 42122.0 63 36660.0 64 32360.0 65 28060.0 66 24358.5 67 20657.0 68 20657.0 69 17634.0 70 14611.0 71 12441.0 72 10271.0 73 8452.5 74 6634.0 75 6634.0 76 5353.0 77 4072.0 78 3228.5 79 2385.0 80 1852.0 81 1319.0 82 1319.0 83 985.5 84 652.0 85 505.5 86 359.0 87 271.0 88 183.0 89 183.0 90 140.0 91 97.0 92 70.0 93 43.0 94 32.5 95 22.0 96 22.0 97 14.5 98 7.0 99 5.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1301387.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.51452344692876 #Duplication Level Percentage of deduplicated Percentage of total 1 83.83124013351731 47.376825861107804 2 9.471280348390714 10.705297906431255 3 2.620810756172253 4.443416127889797 4 1.145256764225142 2.588945610182223 5 0.6323481053335275 1.7868425912746309 6 0.40130937040265 1.3607884693855672 7 0.287698480300109 1.13813997573964 8 0.21809244834612224 0.9860312628524021 9 0.1620914188076753 0.8244467359877087 >10 1.0683960344029466 11.493412627319314 >50 0.09490816079646934 3.7119094307419123 >100 0.058792632609002346 6.119893384363424 >500 0.004910745281828891 1.8604426627861055 >1k 0.002318963049752532 2.3616898427237536 >5k 2.728191823238273E-4 1.1691655999591462 >10k+ 2.728191823238273E-4 2.072751911255543 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14756 1.1338671740227926 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12131 0.9321593038811669 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9810 0.7538111261292759 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5356 0.41156089618230396 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3188 0.24496940571866788 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2962 0.2276033186131412 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2848 0.21884343396699057 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2603 0.20001736608710555 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2461 0.1891059308261109 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2361 0.18142182148738228 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1559 0.11979526459077892 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1520 0.11679846194867477 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1512 0.11618373320157648 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1435 0.11026696901075546 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1390 0.1068091198083276 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1336 0.10265970076541414 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 7.684109338728603E-5 0.0 5 0.0 0.0 0.0 7.684109338728603E-5 0.0 6 7.684109338728603E-5 0.0 0.0 7.684109338728603E-5 0.0 7 7.684109338728603E-5 0.0 0.0 7.684109338728603E-5 0.0 8 7.684109338728603E-5 0.0 0.0 7.684109338728603E-5 0.0 9 7.684109338728603E-5 0.0 0.0 3.073643735491441E-4 0.0 10 7.684109338728603E-5 0.0 0.0 4.6104656032371614E-4 0.0 11 7.684109338728603E-5 0.0 0.0 5.378876537110022E-4 0.0 12 7.684109338728603E-5 0.0 0.0 6.915698404855742E-4 0.0 13 7.684109338728603E-5 0.0 0.0 6.915698404855742E-4 0.0 14 7.684109338728603E-5 0.0 0.0 7.684109338728603E-4 0.0 15 7.684109338728603E-5 0.0 0.0 9.989342140347183E-4 0.0 16 1.5368218677457206E-4 0.0 0.0 0.0019210273346821508 0.0 17 2.3052328016185807E-4 0.0 0.0 0.002612597175167725 0.0 18 2.3052328016185807E-4 0.0 0.0 0.0029968026421041552 0.0 19 2.3052328016185807E-4 0.0 0.0 0.004149419042913445 0.0 20 2.3052328016185807E-4 0.0 0.0 0.006454651844532026 0.0 21 2.3052328016185807E-4 0.0 0.0 0.010757753074220043 0.0 22 2.3052328016185807E-4 0.0 0.0 0.016290311798104636 0.0 23 2.3052328016185807E-4 0.0 0.0 0.019978684280694367 0.0 24 2.3052328016185807E-4 0.0 0.0 0.025357560817804388 0.0 25 2.3052328016185807E-4 0.0 0.0 0.03127432500862541 0.0 26 2.3052328016185807E-4 0.0 0.0 0.038497387787030296 0.0 27 2.3052328016185807E-4 0.0 0.0 0.09044196691683565 0.0 28 2.3052328016185807E-4 0.0 0.0 0.19156484581450406 0.0 29 2.3052328016185807E-4 0.0 0.0 0.3193515841175607 0.0 30 2.3052328016185807E-4 0.0 0.0 0.4965471454686423 0.0 31 2.3052328016185807E-4 0.0 0.0 0.7060928071357713 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4120 0.0 22.99029 1 GAGTCGC 45 0.0038260752 20.555557 26 TATACCG 45 0.0038260752 20.555557 5 CTTACTC 125 4.129106E-10 19.24 3 ATAGACG 70 1.2193544E-4 18.5 3 TCTATAC 100 2.8756403E-7 18.5 3 GTATTGG 420 0.0 18.059523 1 AGACGCG 65 0.0015800861 17.076923 21 TGTTACG 155 4.0017767E-10 16.709679 16 ACCGTTA 255 0.0 16.686274 8 CCTAGAC 80 3.382994E-4 16.1875 2 TAGCGCA 80 3.382994E-4 16.1875 4 GGACCGT 310 0.0 15.5161295 6 ACCGTTC 85 5.364826E-4 15.235294 8 TTTAGAC 110 1.4520825E-5 15.136364 3 GTATCAA 6370 0.0 14.811618 2 ATTAGAC 125 2.9592902E-6 14.799999 3 TTGGACC 675 0.0 14.525926 4 GACCGTT 295 0.0 14.423729 7 ATTGGAC 475 0.0 14.410526 3 >>END_MODULE