##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088458_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 936645 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.420849948486353 31.0 31.0 34.0 30.0 34.0 2 31.541191166343705 31.0 31.0 34.0 30.0 34.0 3 31.702041862178305 31.0 31.0 34.0 30.0 34.0 4 35.414457985682944 37.0 35.0 37.0 33.0 37.0 5 35.291423111210754 37.0 35.0 37.0 33.0 37.0 6 35.36422443935536 37.0 35.0 37.0 33.0 37.0 7 35.20101852889835 37.0 35.0 37.0 32.0 37.0 8 35.239152507086466 37.0 35.0 37.0 32.0 37.0 9 36.795307720641226 39.0 37.0 39.0 32.0 39.0 10 36.63832828873266 39.0 35.0 39.0 32.0 39.0 11 36.67293798611 39.0 35.0 39.0 32.0 39.0 12 36.521454766747276 38.0 35.0 39.0 32.0 39.0 13 36.52781149741898 38.0 35.0 39.0 32.0 39.0 14 37.47086889910265 39.0 36.0 41.0 32.0 41.0 15 37.499421872747945 39.0 36.0 41.0 32.0 41.0 16 37.362241831216735 39.0 36.0 41.0 32.0 41.0 17 37.43587805411869 39.0 36.0 41.0 32.0 41.0 18 37.31616567643024 39.0 36.0 41.0 32.0 41.0 19 37.401885452866345 39.0 36.0 41.0 32.0 41.0 20 37.29985960529336 39.0 36.0 41.0 31.0 41.0 21 37.14544464551671 39.0 36.0 40.0 31.0 41.0 22 37.046479722840566 39.0 36.0 40.0 31.0 41.0 23 36.828873265751696 39.0 35.0 40.0 30.0 41.0 24 37.026401678330636 39.0 36.0 40.0 31.0 41.0 25 37.00085838284515 39.0 36.0 41.0 31.0 41.0 26 36.81215508543792 39.0 36.0 40.0 30.0 41.0 27 36.73607610140448 39.0 35.0 40.0 30.0 41.0 28 36.531050718255045 39.0 35.0 40.0 30.0 41.0 29 36.359649600435596 39.0 35.0 40.0 30.0 41.0 30 36.16826011989601 38.0 35.0 40.0 30.0 41.0 31 35.89681149208078 38.0 35.0 40.0 29.0 41.0 32 35.751849420004376 38.0 34.0 40.0 28.0 41.0 33 35.52461071163568 38.0 34.0 40.0 27.0 41.0 34 35.4001718900971 38.0 34.0 40.0 27.0 41.0 35 35.161537188582656 38.0 34.0 40.0 26.0 41.0 36 35.009271388839956 38.0 33.0 40.0 25.0 41.0 37 34.83302852201208 38.0 33.0 40.0 25.0 41.0 38 34.72691895008248 38.0 33.0 40.0 24.0 41.0 39 34.61088459341586 38.0 33.0 40.0 24.0 41.0 40 34.487103438335765 38.0 33.0 40.0 23.0 41.0 41 34.26670083115802 38.0 33.0 40.0 22.0 41.0 42 34.0095436371304 38.0 33.0 40.0 21.0 41.0 43 33.65115385231331 37.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 2.0 15 10.0 16 15.0 17 50.0 18 95.0 19 209.0 20 496.0 21 935.0 22 1713.0 23 2849.0 24 4511.0 25 6696.0 26 9634.0 27 13356.0 28 17557.0 29 23327.0 30 28549.0 31 35334.0 32 43088.0 33 52841.0 34 64544.0 35 77815.0 36 99364.0 37 131122.0 38 164074.0 39 158455.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.89986601113549 20.940164096322516 13.704124828510267 23.45584506403173 2 19.238985955191133 23.75937521686445 34.49086900586668 22.510769822077734 3 19.83825248626748 24.750679286175657 32.35420036406536 23.056867863491505 4 13.947973885516927 16.425006272387083 35.93955020311858 33.68746963897741 5 12.897202248450586 38.36864553806405 34.594430120269685 14.139722093215678 6 32.64182267561349 37.20982869710509 13.477678309284736 16.67067031799668 7 26.355556267315794 32.76449455236509 21.246470114077372 19.633479066241748 8 27.616759818287612 33.911247057316274 18.68626854357841 19.785724580817707 9 25.10075855847199 14.184883280218225 21.213907083259933 39.50045107804985 10 16.70280629267225 27.379743659550844 32.84253906229148 23.07491098548543 11 33.6515969230605 22.46443423068505 23.05985725648458 20.82411158976987 12 21.574128938925632 27.12756700777776 30.33668038584522 20.96162366745138 13 31.95842608458915 20.824431881876272 25.600307480422146 21.616834553112437 14 20.96386571219619 22.81152410998831 27.253121513486967 28.971488664328533 15 23.239327600104627 29.364487078882608 24.873778219069123 22.52240710194364 16 22.25827287819825 28.104030876159058 26.00013879324611 23.637557452396585 17 22.386282956723196 26.492320996749037 26.436269878128854 24.685126168398913 18 23.594318018032446 25.334785324215687 28.726678731002675 22.344217926749195 19 23.365629454062102 24.707866907953388 29.868093034180504 22.058410603804003 20 24.234688702763588 24.509926386197545 29.511180863614285 21.744204047424585 21 23.10234934260045 25.17880306839838 30.03624639004105 21.682601198960118 22 21.86559475575058 25.67600318156826 29.682110084396967 22.776291978284195 23 22.830528108301436 25.782019868787 30.305825579595258 21.081626443316303 24 22.766576451056697 25.852270604124293 28.298341420709022 23.08281152410999 25 22.620843542644227 25.950600280789416 29.2897522540557 22.138803922510665 26 22.3454990951748 26.804178744348178 29.23434171964832 21.615980440828704 27 21.546904109881545 26.721329852825775 28.86579226921619 22.865973768076486 28 21.917268548916613 26.487303087082086 28.972449540647737 22.622978823353566 29 22.156419988362718 26.407550352588228 28.48357702224429 22.952452636804765 30 22.013996765049725 26.580401326009323 30.079379060369725 21.32622284857123 31 22.674545852484133 26.323206764569285 29.77947888474289 21.222768498203695 32 22.224428678955206 26.359613300663536 28.75817412146544 22.657783898915813 33 21.99456571059473 26.317655034725 29.409327973778755 22.278451280901514 34 21.2340854859632 26.875710648111077 29.854320473605263 22.035883392320464 35 20.887315898766342 28.720166124839185 28.933907723844143 21.458610252550326 36 22.97423250004004 26.449722146597697 28.814011712014693 21.762033641347575 37 21.83762257845822 27.276823129360643 28.682691948390264 22.202862343790873 38 21.796198132697022 25.854405884833636 30.08407667793027 22.265319304539073 39 21.35302062147345 25.66009534028367 30.81647796123398 22.1704060770089 40 20.32317473535865 26.261710680140286 30.511239583833788 22.903875000667277 41 21.57348835471283 25.17495956312157 30.557148119084605 22.694403963080997 42 20.31100363531541 26.82830741636372 30.18710397215594 22.67358497616493 43 20.695033870890253 26.63698626480684 29.49377832583316 23.174201538469752 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 57.0 1 115.0 2 173.0 3 388.5 4 604.0 5 604.0 6 995.0 7 1386.0 8 1552.5 9 1719.0 10 2735.0 11 3751.0 12 3751.0 13 7040.5 14 10330.0 15 16846.0 16 23362.0 17 21375.0 18 19388.0 19 19388.0 20 20143.5 21 20899.0 22 16782.5 23 12666.0 24 14111.0 25 15556.0 26 15556.0 27 17171.5 28 18787.0 29 20249.0 30 21711.0 31 23995.0 32 26279.0 33 26279.0 34 29091.0 35 31903.0 36 34948.5 37 37994.0 38 40771.5 39 43549.0 40 43549.0 41 44739.0 42 45929.0 43 49574.5 44 53220.0 45 56805.0 46 60390.0 47 60390.0 48 77933.0 49 95476.0 50 90863.5 51 86251.0 52 80147.0 53 74043.0 54 74043.0 55 66443.5 56 58844.0 57 51451.0 58 44058.0 59 39492.0 60 34926.0 61 34926.0 62 31072.0 63 27218.0 64 23710.5 65 20203.0 66 17515.5 67 14828.0 68 14828.0 69 12861.5 70 10895.0 71 9315.0 72 7735.0 73 6494.5 74 5254.0 75 5254.0 76 4231.0 77 3208.0 78 2504.5 79 1801.0 80 1448.5 81 1096.0 82 1096.0 83 814.5 84 533.0 85 417.5 86 302.0 87 219.5 88 137.0 89 137.0 90 118.5 91 100.0 92 71.5 93 43.0 94 37.0 95 31.0 96 31.0 97 18.5 98 6.0 99 5.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 936645.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.8308752288234 #Duplication Level Percentage of deduplicated Percentage of total 1 85.19961146503661 50.123677116438 2 8.542548143251318 10.051311679036704 3 2.378196697747053 4.197341795842701 4 1.0678276272769627 2.512849356248861 5 0.6033583952584426 1.7748051234856275 6 0.3800232689751504 1.3414260912676002 7 0.2965534718785578 1.2212550211933275 8 0.21727524122561195 1.0225994085485186 9 0.17152440276578682 0.9081837664031209 >10 1.0047607879879445 11.06267936384093 >50 0.08540362010152151 3.424036539968931 >100 0.04580047075918432 4.961603701202843 >500 0.004379327837475296 1.7601084794002637 >1k 0.002189663918737648 2.518213266026555 >5k 3.649439864562747E-4 1.8754022404929622 >10k+ 1.8247199322813734E-4 1.2445070506030287 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11593 1.2377154631690768 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9247 0.9872470359634653 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8223 0.8779206636452443 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3927 0.4192623672789584 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2480 0.2647748079581912 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2472 0.2639206956744551 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2241 0.23925820348157523 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2215 0.23648233855943288 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2117 0.22601946308366563 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2007 0.21427541918229426 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1314 0.14028794260365454 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1254 0.13388210047563376 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1230 0.13131976362442546 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1134 0.12107041621959226 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1067 0.11391722584330242 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 951 0.10153259772912897 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.0676403546701258E-4 0.0 10 1.0676403546701258E-4 0.0 0.0 1.0676403546701258E-4 0.0 11 2.1352807093402517E-4 0.0 0.0 2.1352807093402517E-4 0.0 12 2.1352807093402517E-4 0.0 0.0 7.473482482690881E-4 0.0 13 2.1352807093402517E-4 0.0 0.0 7.473482482690881E-4 0.0 14 2.1352807093402517E-4 0.0 0.0 8.541122837361007E-4 0.0 15 2.1352807093402517E-4 0.0 0.0 8.541122837361007E-4 0.0 16 2.1352807093402517E-4 0.0 0.0 0.0013879324610711636 0.0 17 2.1352807093402517E-4 0.0 0.0 0.002348808780274277 0.0 18 2.1352807093402517E-4 0.0 0.0 0.0026691008866753145 0.0 19 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.00373674124134544 0.0 20 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.007046426340822831 0.0 21 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.01281168425604151 0.0 22 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.01943105445499629 0.0 23 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.024128672015544844 0.0 24 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.02989392993076352 0.0 25 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.03448478345584506 0.0 26 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.04452060278974425 0.0 27 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.09971760912618975 0.0 28 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.21224690250842101 0.0 29 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.3522145530056745 0.0 30 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.5505821309033839 0.0 31 2.1352807093402517E-4 0.0 1.0676403546701258E-4 0.7695551676462267 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTTAGC 40 5.938975E-5 27.75 25 TCGTTCC 40 0.001930922 23.125 28 TATTGCG 40 0.001930922 23.125 9 GGTATCA 3580 0.0 20.722065 1 GTATTGG 360 0.0 20.555555 1 CGCCTAT 45 0.0038252869 20.555555 34 TCTATCG 45 0.0038252869 20.555555 29 GCTTTAT 85 1.2448054E-6 19.588236 1 TTGGACC 595 0.0 18.966387 4 TCTATGC 60 9.235072E-4 18.5 8 ATTGGAC 460 0.0 18.097826 3 TTAGAAC 75 2.0667512E-4 17.266666 3 CGAACAA 65 0.001579639 17.076923 14 CACCTAA 65 0.001579639 17.076923 1 GATACTG 255 0.0 16.686274 36 TGGACCC 620 0.0 16.411291 5 GGACCCT 635 0.0 16.31496 6 ATGTGAC 80 3.3817298E-4 16.1875 11 GATCATC 85 5.362835E-4 15.235294 11 CAATGCG 85 5.362835E-4 15.235294 19 >>END_MODULE