##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088456_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1235369 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.497772730253065 31.0 31.0 34.0 30.0 34.0 2 31.61914618223381 31.0 31.0 34.0 30.0 34.0 3 31.77599486469225 31.0 31.0 34.0 30.0 34.0 4 35.47265230064863 37.0 35.0 37.0 33.0 37.0 5 35.34784991366952 37.0 35.0 37.0 33.0 37.0 6 35.42480910561945 37.0 35.0 37.0 33.0 37.0 7 35.26936000498637 37.0 35.0 37.0 32.0 37.0 8 35.309928450527735 37.0 35.0 37.0 32.0 37.0 9 36.87987475806824 39.0 37.0 39.0 33.0 39.0 10 36.72975119174919 39.0 35.0 39.0 32.0 39.0 11 36.75912460163725 39.0 35.0 39.0 32.0 39.0 12 36.62324050546841 39.0 35.0 39.0 32.0 39.0 13 36.63067957832842 39.0 35.0 39.0 32.0 39.0 14 37.61768912770192 39.0 36.0 41.0 32.0 41.0 15 37.6339385236314 39.0 36.0 41.0 32.0 41.0 16 37.51572283261115 39.0 36.0 41.0 32.0 41.0 17 37.57310730639995 39.0 36.0 41.0 32.0 41.0 18 37.45256599445186 39.0 36.0 41.0 32.0 41.0 19 37.532540479808056 39.0 36.0 41.0 32.0 41.0 20 37.431736590443826 39.0 36.0 41.0 32.0 41.0 21 37.28279647619456 39.0 36.0 41.0 31.0 41.0 22 37.18842710153808 39.0 36.0 40.0 31.0 41.0 23 36.989592583268646 39.0 36.0 40.0 31.0 41.0 24 37.19919068715501 39.0 36.0 41.0 31.0 41.0 25 37.1702114914653 39.0 36.0 41.0 31.0 41.0 26 36.99996600206092 39.0 36.0 41.0 31.0 41.0 27 36.928629421654584 39.0 36.0 41.0 31.0 41.0 28 36.73992628923018 39.0 35.0 40.0 30.0 41.0 29 36.58635355104426 39.0 35.0 40.0 30.0 41.0 30 36.41474085880413 38.0 35.0 40.0 30.0 41.0 31 36.15740236318056 38.0 35.0 40.0 30.0 41.0 32 36.01134964532864 38.0 35.0 40.0 29.0 41.0 33 35.812766873703325 38.0 35.0 40.0 28.0 41.0 34 35.71241062387028 38.0 34.0 40.0 28.0 41.0 35 35.47324321720878 38.0 34.0 40.0 27.0 41.0 36 35.31787263562547 38.0 34.0 40.0 26.0 41.0 37 35.1722707952037 38.0 34.0 40.0 25.0 41.0 38 35.08573956445402 38.0 34.0 40.0 25.0 41.0 39 34.98796715799085 38.0 34.0 40.0 24.0 41.0 40 34.86542077711194 38.0 33.0 40.0 24.0 41.0 41 34.6605054845961 38.0 33.0 40.0 23.0 41.0 42 34.436369214380484 38.0 33.0 40.0 23.0 41.0 43 34.09944882864958 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 3.0 15 2.0 16 17.0 17 37.0 18 106.0 19 239.0 20 497.0 21 1023.0 22 1911.0 23 3382.0 24 5079.0 25 7736.0 26 11154.0 27 15865.0 28 21254.0 29 27958.0 30 35596.0 31 43771.0 32 54255.0 33 66520.0 34 82682.0 35 100546.0 36 128878.0 37 172622.0 38 223625.0 39 230608.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.53795343739401 21.093292773252365 13.756294677946427 23.6124591114072 2 19.023223020814022 23.54009206965692 34.83218374429017 22.604501165238887 3 19.679140402584167 24.609327253638387 32.544850971653005 23.166681372124444 4 14.015650384621923 16.44002723073025 36.08897422551481 33.45534815913302 5 12.696692243370201 38.43669381375119 34.92810650097258 13.938507441906022 6 32.4412382049412 37.42833113021292 13.746580981067194 16.383849683778692 7 26.25231813328649 32.92295662267711 21.399759909792134 19.424965334244263 8 27.346485139257986 34.21512115003695 18.937094908484834 19.501298802220226 9 24.89790499842557 14.347130290625715 21.273400902888127 39.481563808060585 10 16.481877074784943 27.590541773348694 33.32065156240767 22.606929589458698 11 33.51557307978426 22.530434226534744 23.19849372940393 20.75549896427707 12 21.243774127406468 27.134240862446767 30.65731777307023 20.964667237076533 13 31.497552553123803 20.954629750301326 25.815606511091016 21.732211185483852 14 20.762784236936493 22.82532587429343 27.456249913993307 28.955639974776766 15 23.014581068490468 29.519924815986155 25.062956897898523 22.402537217624854 16 22.20275885180865 28.180082226444082 26.113897952757437 23.50326096898983 17 22.035683265485858 26.84987238630725 26.753302049832882 24.36114229837401 18 23.15138229953965 25.642540811692697 28.957097029308652 22.248979859458995 19 23.1052422393633 25.103835372265294 29.947246531198367 21.84367585717304 20 23.875376506938412 24.77284115110546 29.706832533437378 21.644949808518753 21 22.821440395541735 25.49732104334818 30.076681542114137 21.604557018995944 22 21.764590175081292 25.802088282934086 29.80858350824733 22.624738033737287 23 22.574712494809244 25.969973343996816 30.459563094103864 20.995751067090076 24 22.489231962272 26.132030186932003 28.561182934005952 22.817554916790044 25 22.46559529986587 26.188207733883562 29.428454170373385 21.91774279587718 26 22.14342435337134 26.900140767657277 29.39931307973569 21.55712179923569 27 21.33224971648147 26.905726143362834 29.13688136904844 22.625142771107257 28 21.706955573597845 26.511269102592017 29.260326266888683 22.521449056921455 29 22.020060403005093 26.550204837582942 28.690860787343702 22.738873972068266 30 21.84116648547924 26.745854882225473 30.166533238247034 21.246445394048255 31 22.403913324682748 26.448939547616945 30.026494108238104 21.120653019462203 32 22.054867816822345 26.390090734023598 29.01570300048002 22.53933844867404 33 21.75892385190174 26.333670344650063 29.659154471255146 22.248251332193053 34 21.129881031497472 26.751602152879016 30.125735711354256 21.992781104269252 35 20.865263739012395 28.464126912687625 29.17096025559974 21.49964909270024 36 22.701719081505203 26.408951495464105 29.059738426332537 21.829590996698155 37 21.77851314060819 27.06098339848256 29.07843729282506 22.08206616808419 38 21.6595203538376 25.787679632563226 30.32745681654631 22.22534319705286 39 21.077669910771597 25.69305203546471 31.00377296176284 22.22550509200085 40 20.304540586658725 26.161737909887655 30.738022404641853 22.795699098811774 41 21.318326750954572 25.192877593658253 30.861710144904077 22.627085510483102 42 20.18797622410794 26.836758895520283 30.356597907184007 22.618666973187768 43 20.45372678122893 26.55465694865259 29.890016667084897 23.101599603033588 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 63.0 1 147.0 2 231.0 3 523.0 4 815.0 5 815.0 6 1309.5 7 1804.0 8 2028.5 9 2253.0 10 3438.5 11 4624.0 12 4624.0 13 8826.0 14 13028.0 15 21025.0 16 29022.0 17 26477.0 18 23932.0 19 23932.0 20 25427.5 21 26923.0 22 21661.5 23 16400.0 24 18714.0 25 21028.0 26 21028.0 27 23416.5 28 25805.0 29 28340.5 30 30876.0 31 34042.0 32 37208.0 33 37208.0 34 41340.0 35 45472.0 36 50147.5 37 54823.0 38 58151.0 39 61479.0 40 61479.0 41 63776.0 42 66073.0 43 69742.0 44 73411.0 45 77762.0 46 82113.0 47 82113.0 48 102349.5 49 122586.0 50 115801.5 51 109017.0 52 101007.0 53 92997.0 54 92997.0 55 84499.0 56 76001.0 57 66436.0 58 56871.0 59 50862.0 60 44853.0 61 44853.0 62 39786.0 63 34719.0 64 30151.0 65 25583.0 66 22053.5 67 18524.0 68 18524.0 69 15953.0 70 13382.0 71 11405.5 72 9429.0 73 7733.0 74 6037.0 75 6037.0 76 4784.5 77 3532.0 78 2772.5 79 2013.0 80 1590.0 81 1167.0 82 1167.0 83 897.0 84 627.0 85 484.0 86 341.0 87 252.0 88 163.0 89 163.0 90 126.0 91 89.0 92 62.0 93 35.0 94 23.0 95 11.0 96 11.0 97 8.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1235369.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.80413513585192 #Duplication Level Percentage of deduplicated Percentage of total 1 85.34612342911204 51.040510988757134 2 8.899912513562825 10.645031413167413 3 2.294052111417022 4.1158140743961 4 0.9909960128734219 2.3706263789189026 5 0.5414716599354918 1.61911221615081 6 0.34180376755594366 1.2264767222915383 7 0.2464287459026503 1.031622061492443 8 0.17491261653112922 0.8368398204794477 9 0.1348287687836268 0.7256986117682893 >10 0.8871938270749221 10.124083974501447 >50 0.0866456632313384 3.6142116768118506 >100 0.048710952952513605 5.297730555591621 >500 0.004206232609446167 1.7163020118589254 >1k 0.002170958766165764 2.3118265953317 >5k 2.713698457707205E-4 1.206466753927403 >10k+ 2.713698457707205E-4 2.1176461445549797 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14249 1.1534205569348106 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11848 0.9590656718761763 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9853 0.7975754612589437 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5015 0.40595158207790544 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2969 0.24033305028699925 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2855 0.23110503825172884 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2667 0.215886913140932 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2510 0.2031781597239367 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2489 0.20147826277007114 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2361 0.1911169860988903 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1536 0.12433532005417004 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1512 0.12239258067832365 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1418 0.11478351812292521 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1341 0.10855056262541798 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1317 0.10660782324957159 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 8.094747399360029E-5 0.0 5 0.0 0.0 0.0 8.094747399360029E-5 0.0 6 8.094747399360029E-5 0.0 0.0 8.094747399360029E-5 0.0 7 8.094747399360029E-5 0.0 0.0 8.094747399360029E-5 0.0 8 8.094747399360029E-5 0.0 0.0 8.094747399360029E-5 0.0 9 8.094747399360029E-5 0.0 0.0 2.428424219808009E-4 0.0 10 8.094747399360029E-5 0.0 0.0 2.428424219808009E-4 0.0 11 8.094747399360029E-5 0.0 0.0 4.0473736996800145E-4 0.0 12 1.6189494798720059E-4 0.0 0.0 5.666323179552021E-4 0.0 13 1.6189494798720059E-4 0.0 0.0 5.666323179552021E-4 0.0 14 1.6189494798720059E-4 0.0 0.0 6.475797919488023E-4 0.0 15 1.6189494798720059E-4 0.0 0.0 8.094747399360029E-4 0.0 16 2.428424219808009E-4 0.0 0.0 0.0012951595838976047 0.0 17 2.428424219808009E-4 0.0 0.0 0.0017808444278592064 0.0 18 2.428424219808009E-4 0.0 0.0 0.002428424219808009 0.0 19 2.428424219808009E-4 0.0 0.0 0.0031569514857504115 0.0 20 2.428424219808009E-4 0.0 0.0 0.004694953491628817 0.0 21 2.428424219808009E-4 0.0 0.0 0.00849948476932803 0.0 22 2.428424219808009E-4 0.0 0.0 0.014408650370860853 0.0 23 2.428424219808009E-4 0.0 0.0 0.018456024070540866 0.0 24 2.428424219808009E-4 0.0 0.0 0.022665292718208083 0.0 25 2.428424219808009E-4 0.0 0.0 0.026307929047920096 0.0 26 2.428424219808009E-4 0.0 0.0 0.03326941181136972 0.0 27 2.428424219808009E-4 0.0 0.0 0.09058022339883873 0.0 28 2.428424219808009E-4 0.0 0.0 0.19726899412240392 0.0 29 2.428424219808009E-4 0.0 0.0 0.3360129645474348 0.0 30 2.428424219808009E-4 0.0 0.0 0.5258347910624275 0.0 31 2.428424219808009E-4 0.0 0.0 0.7509497162386299 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAACGC 40 0.0019312681 23.125002 3 GGTATCA 3750 0.0 22.397333 1 CTACGGA 45 0.0038259681 20.555555 25 GTCTAAT 60 9.237347E-4 18.5 1 AATATAC 105 4.797985E-7 17.619047 3 TTATGCG 140 1.869921E-9 17.178572 4 TGTTACG 145 2.9795046E-9 16.586206 16 TATACTG 135 2.2195309E-8 16.444445 5 GTATTGG 475 0.0 15.968421 1 TAGAGCT 155 7.208655E-9 15.516129 4 CGTTATT 155 7.208655E-9 15.516129 10 TTAACGG 145 5.345828E-8 15.310345 35 ACCGTTA 185 3.0559022E-10 15.0 8 CTAATAC 285 0.0 14.929826 3 CGTTTAC 175 2.237357E-9 14.8 28 TCTATGC 100 1.0934686E-4 14.8 3 GCTAGGT 75 0.0041046385 14.799999 17 CGAACTA 190 4.5474735E-10 14.605264 24 GTATCAA 5730 0.0 14.561081 2 TCTAATA 280 0.0 14.535714 2 >>END_MODULE