##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088455_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1222594 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.466187466975953 31.0 31.0 34.0 30.0 34.0 2 31.581717234012274 31.0 31.0 34.0 30.0 34.0 3 31.7428892993095 31.0 31.0 34.0 30.0 34.0 4 35.44700530184182 37.0 35.0 37.0 33.0 37.0 5 35.32302219706624 37.0 35.0 37.0 33.0 37.0 6 35.394195456545674 37.0 35.0 37.0 33.0 37.0 7 35.242944100821695 37.0 35.0 37.0 32.0 37.0 8 35.28113748308923 37.0 35.0 37.0 32.0 37.0 9 36.83929088479086 39.0 37.0 39.0 33.0 39.0 10 36.68876830738577 39.0 35.0 39.0 32.0 39.0 11 36.72305851329223 39.0 35.0 39.0 32.0 39.0 12 36.57941393463406 38.0 35.0 39.0 32.0 39.0 13 36.592041184563314 39.0 35.0 39.0 32.0 39.0 14 37.5586016289954 39.0 36.0 41.0 32.0 41.0 15 37.58825088295869 39.0 36.0 41.0 32.0 41.0 16 37.464967110913356 39.0 36.0 41.0 32.0 41.0 17 37.527271522680465 39.0 36.0 41.0 32.0 41.0 18 37.40375300385901 39.0 36.0 41.0 32.0 41.0 19 37.48209790003877 39.0 36.0 41.0 32.0 41.0 20 37.38542885046058 39.0 36.0 41.0 32.0 41.0 21 37.22999458528342 39.0 36.0 41.0 31.0 41.0 22 37.135390816575246 39.0 36.0 40.0 31.0 41.0 23 36.92823864668075 39.0 36.0 40.0 31.0 41.0 24 37.13374022774527 39.0 36.0 41.0 31.0 41.0 25 37.09737737957163 39.0 36.0 41.0 31.0 41.0 26 36.929444279949024 39.0 36.0 41.0 31.0 41.0 27 36.8659236017844 39.0 35.0 40.0 30.0 41.0 28 36.675519428362975 39.0 35.0 40.0 30.0 41.0 29 36.5077114724921 39.0 35.0 40.0 30.0 41.0 30 36.33037950456161 38.0 35.0 40.0 30.0 41.0 31 36.08075779858236 38.0 35.0 40.0 29.0 41.0 32 35.9394762284127 38.0 35.0 40.0 29.0 41.0 33 35.730946659316174 38.0 34.0 40.0 28.0 41.0 34 35.618349182148776 38.0 34.0 40.0 27.0 41.0 35 35.38598586284572 38.0 34.0 40.0 26.0 41.0 36 35.22686762735626 38.0 34.0 40.0 26.0 41.0 37 35.066699983804924 38.0 34.0 40.0 25.0 41.0 38 34.97924822140465 38.0 33.0 40.0 25.0 41.0 39 34.88095393892004 38.0 33.0 40.0 24.0 41.0 40 34.78025738716205 38.0 33.0 40.0 24.0 41.0 41 34.5601385251359 38.0 33.0 40.0 23.0 41.0 42 34.32375261125116 38.0 33.0 40.0 22.0 41.0 43 33.98782588496263 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 2.0 15 9.0 16 19.0 17 49.0 18 109.0 19 224.0 20 496.0 21 1039.0 22 1918.0 23 3246.0 24 5264.0 25 8074.0 26 11508.0 27 16161.0 28 21723.0 29 28377.0 30 36151.0 31 44564.0 32 54678.0 33 67400.0 34 82200.0 35 100330.0 36 127907.0 37 171436.0 38 219048.0 39 220660.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.69871600874861 21.21121157146199 13.760168952244161 23.329903467545236 2 19.046224666569607 23.62305066113526 34.85531582847617 22.47540884381896 3 19.648223367691973 24.89051966556355 32.53827517556932 22.922981791175157 4 13.990008130254198 16.500980701688377 36.27148505554583 33.237526112511595 5 12.641481963759023 38.517692709108665 34.935227884318095 13.905597442814214 6 32.422210480339345 37.41569155418725 13.68107482942007 16.48102313605334 7 26.13017894738564 32.87248260665437 21.564804015069598 19.432534430890385 8 27.196845395936837 34.44062378843672 18.94316510632311 19.419365709303335 9 24.911131577612846 14.41713275216466 21.502722899016355 39.16901277120614 10 16.62391603426812 27.5118314011029 33.20268216595206 22.66157039867691 11 33.40610210748621 22.66901358913916 23.080024930598384 20.844859372776245 12 21.08222353455031 27.31094705192402 30.72728968079346 20.87953973273221 13 31.51569531667913 21.076825176632635 25.888725120522434 21.51875438616581 14 20.73705580102634 22.96355126885949 27.427747886870048 28.871645043244122 15 23.053278520915367 29.563698169629493 25.0733276950484 22.309695614406742 16 22.113718863334846 28.327719586387634 26.17622857628943 23.382332973988092 17 21.83562163727288 26.910159873187666 26.805219067000163 24.448999422539288 18 23.140960940426666 25.67688046890464 29.0006330801558 22.18152551051289 19 23.166235070677594 25.084124410883746 29.91524578069253 21.834394737746138 20 23.996109910567203 24.753679471680705 29.71706061047249 21.533150007279602 21 22.976801783748325 25.430600837236238 30.08243128953684 21.5101660894786 22 21.75971745321832 25.825826071451356 29.87762086187238 22.536835613457942 23 22.493076197004076 26.160769642252458 30.558877272422407 20.787276888321063 24 22.570452660490727 26.132550953137347 28.54120010404108 22.75579628233085 25 22.388953323834404 26.28525904756608 29.42980253461084 21.89598509398868 26 22.270762002758072 26.890284100854412 29.356106769704414 21.4828471266831 27 21.294149979469882 27.043319368490277 29.076619057512143 22.5859115945277 28 21.686676034726165 26.684573946870344 29.199309010186536 22.429441008216955 29 21.893449501633413 26.551741624774866 28.8242867215118 22.73052215207992 30 21.8422468947173 26.795976423898693 30.082349496235057 21.279427185148954 31 22.42126167803866 26.517143058120684 30.057484332493047 21.00411093134761 32 21.937045331483716 26.489496922118054 29.154486280809493 22.41897146558874 33 21.652404641279116 26.476082820625653 29.806051722812317 22.065460815282915 34 21.1277824036434 26.777818310902884 30.189171548363564 21.905227737090154 35 20.7794247313499 28.52549579009876 29.292798754124426 21.402280724426916 36 22.700667596929154 26.600326846033923 29.025252863992463 21.673752693044463 37 21.629257136874546 27.180650322183812 29.11473473614299 22.07535780479865 38 21.568811886856963 25.863941750082205 30.35161304570446 22.215633317356374 39 21.07551648380411 25.78942805215795 30.962854389928303 22.17220107410964 40 20.207362378680084 26.213526321902446 30.7390679162502 22.840043383167266 41 21.299548337387556 25.29973155438355 30.842536443005606 22.55818366522329 42 20.09595990165173 26.861247478721474 30.500558648251175 22.542233971375616 43 20.342239533320136 26.650138966819732 29.849811139266187 23.15781036059395 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 74.0 1 151.0 2 228.0 3 531.5 4 835.0 5 835.0 6 1308.5 7 1782.0 8 2078.5 9 2375.0 10 3565.5 11 4756.0 12 4756.0 13 8898.0 14 13040.0 15 20909.5 16 28779.0 17 26522.0 18 24265.0 19 24265.0 20 25699.0 21 27133.0 22 22251.0 23 17369.0 24 19666.5 25 21964.0 26 21964.0 27 24126.5 28 26289.0 29 28583.5 30 30878.0 31 33958.0 32 37038.0 33 37038.0 34 40834.5 35 44631.0 36 48966.0 37 53301.0 38 56659.0 39 60017.0 40 60017.0 41 61986.0 42 63955.0 43 68194.0 44 72433.0 45 76062.5 46 79692.0 47 79692.0 48 100199.0 49 120706.0 50 114648.5 51 108591.0 52 101334.5 53 94078.0 54 94078.0 55 84501.0 56 74924.0 57 65632.5 58 56341.0 59 50343.5 60 44346.0 61 44346.0 62 39382.0 63 34418.0 64 29894.0 65 25370.0 66 21771.0 67 18172.0 68 18172.0 69 15620.5 70 13069.0 71 10906.5 72 8744.0 73 7126.5 74 5509.0 75 5509.0 76 4429.5 77 3350.0 78 2645.5 79 1941.0 80 1492.5 81 1044.0 82 1044.0 83 812.5 84 581.0 85 422.5 86 264.0 87 205.0 88 146.0 89 146.0 90 126.5 91 107.0 92 71.0 93 35.0 94 26.5 95 18.0 96 18.0 97 11.5 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1222594.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.1717864600501 #Duplication Level Percentage of deduplicated Percentage of total 1 85.69501370152776 51.56422065139395 2 8.67547280607959 10.440373942547854 3 2.2371003595386654 4.038309753715857 4 0.9317929561115077 2.242705871204819 5 0.534641188899338 1.6085157725599135 6 0.35194648826511143 1.270634936235169 7 0.24465476800345168 1.0304920119715755 8 0.17115070490146136 0.8238754934254227 9 0.13479772297129985 0.7299917821737041 >10 0.8824172932147242 10.181715532267031 >50 0.08679437447818267 3.6128282456407104 >100 0.04752579306709118 5.2040159263267185 >500 0.003960478475795343 1.594945050005055 >1k 0.002185091572852603 2.3290191461303142 >5k 2.731364466065754E-4 1.2249907702831344 >10k+ 2.731364466065754E-4 2.1033651141186764 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14031 1.1476418173162963 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 11565 0.94593953511959 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9840 0.804846089544035 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5067 0.4144466601341083 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2798 0.22885765838863925 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2769 0.22648565263693426 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2630 0.21511638368910693 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2581 0.21110851190174335 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2435 0.1991666898414355 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2221 0.18166292325988842 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1545 0.12637065125462746 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1483 0.12129946654408578 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1455 0.11900925409416371 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1376 0.11254758325331223 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1316 0.10763998514633641 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1239 0.10134190090905076 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 8.179330178293039E-5 0.0 4 0.0 0.0 0.0 8.179330178293039E-5 0.0 5 0.0 0.0 0.0 8.179330178293039E-5 0.0 6 8.179330178293039E-5 0.0 0.0 8.179330178293039E-5 0.0 7 8.179330178293039E-5 0.0 0.0 8.179330178293039E-5 0.0 8 8.179330178293039E-5 0.0 0.0 8.179330178293039E-5 0.0 9 8.179330178293039E-5 0.0 0.0 3.2717320713172154E-4 0.0 10 8.179330178293039E-5 0.0 0.0 4.907598106975823E-4 0.0 11 8.179330178293039E-5 0.0 0.0 5.725531124805127E-4 0.0 12 8.179330178293039E-5 0.0 0.0 8.997263196122344E-4 0.0 13 8.179330178293039E-5 0.0 0.0 8.997263196122344E-4 0.0 14 8.179330178293039E-5 0.0 0.0 0.0012268995267439558 0.0 15 8.179330178293039E-5 0.0 0.0 0.0013904861303098166 0.0 16 8.179330178293039E-5 0.0 0.0 0.0017176593374415383 0.0 17 8.179330178293039E-5 0.0 0.0 0.002372005751704981 0.0 18 1.6358660356586077E-4 0.0 0.0 0.0026991789588367027 0.0 19 1.6358660356586077E-4 0.0 0.0 0.0039260784855806585 0.0 20 1.6358660356586077E-4 0.0 0.0 0.006052704331936849 0.0 21 1.6358660356586077E-4 0.0 0.0 0.011369268947827325 0.0 22 1.6358660356586077E-4 0.0 0.0 0.01873066610829106 0.0 23 1.6358660356586077E-4 0.0 0.0 0.023474677611701023 0.0 24 3.2717320713172154E-4 0.0 0.0 0.030508901565033036 0.0 25 3.2717320713172154E-4 0.0 0.0 0.03541649967200886 0.0 26 3.2717320713172154E-4 0.0 0.0 0.045068109282394644 0.0 27 3.2717320713172154E-4 0.0 0.0 0.10297776694470936 0.0 28 3.2717320713172154E-4 0.0 0.0 0.21806094255329242 0.0 29 3.2717320713172154E-4 0.0 0.0 0.3643891594429549 0.0 30 4.08966508914652E-4 0.0 0.0 0.5570941784435389 0.0 31 4.08966508914652E-4 0.0 0.0 0.7817803784412487 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3995 0.0 22.505632 1 GTATAAC 60 3.7265367E-5 21.583332 1 CGTATAC 65 6.90259E-5 19.923077 3 GTATTGG 580 0.0 18.818966 1 CTCTTAG 80 1.616807E-5 18.5 1 CCGTATA 60 9.237275E-4 18.5 2 CTAATAC 260 0.0 17.076923 3 TGTTACG 100 5.8784044E-6 16.650002 16 TCTAATA 270 0.0 16.444445 2 GACCGTT 215 0.0 16.348837 7 TAATACT 285 0.0 16.22807 4 ACCGTTA 210 0.0 15.857144 8 TTGGACC 745 0.0 15.395973 4 ATTGGAC 640 0.0 15.320313 3 CGCCGTT 195 4.1836756E-11 15.179486 25 CGTTATT 110 1.451939E-5 15.136364 10 ATACCGT 75 0.0041046035 14.8 6 TTATACC 115 2.2099615E-5 14.47826 4 CCGTTTA 220 1.8189894E-11 14.295454 27 TCTTAGA 130 4.4442295E-6 14.230769 2 >>END_MODULE