##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088453_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 987318 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.46346567164784 31.0 31.0 34.0 30.0 34.0 2 31.588184353977137 31.0 31.0 34.0 30.0 34.0 3 31.74435997317987 31.0 31.0 34.0 30.0 34.0 4 35.44722065231263 37.0 35.0 37.0 33.0 37.0 5 35.32861145041415 37.0 35.0 37.0 33.0 37.0 6 35.40302010091987 37.0 35.0 37.0 33.0 37.0 7 35.238831865721075 37.0 35.0 37.0 32.0 37.0 8 35.28451826058068 37.0 35.0 37.0 32.0 37.0 9 36.84314982609453 39.0 37.0 39.0 33.0 39.0 10 36.6918824532724 39.0 35.0 39.0 32.0 39.0 11 36.72783946003213 39.0 35.0 39.0 32.0 39.0 12 36.577912081011384 38.0 35.0 39.0 32.0 39.0 13 36.58489767227985 39.0 35.0 39.0 32.0 39.0 14 37.55335666927981 39.0 36.0 41.0 32.0 41.0 15 37.57150988840475 39.0 36.0 41.0 32.0 41.0 16 37.445549458229266 39.0 36.0 41.0 32.0 41.0 17 37.51240329863327 39.0 36.0 41.0 32.0 41.0 18 37.38971638317138 39.0 36.0 41.0 32.0 41.0 19 37.46684350938603 39.0 36.0 41.0 32.0 41.0 20 37.37152568878518 39.0 36.0 41.0 32.0 41.0 21 37.209122086298436 39.0 36.0 41.0 31.0 41.0 22 37.12089114145594 39.0 36.0 40.0 31.0 41.0 23 36.90837197336623 39.0 36.0 40.0 31.0 41.0 24 37.11342748739514 39.0 36.0 41.0 31.0 41.0 25 37.08509720272496 39.0 36.0 41.0 31.0 41.0 26 36.90342929025906 39.0 36.0 41.0 31.0 41.0 27 36.84248742553058 39.0 35.0 40.0 30.0 41.0 28 36.652827153966605 39.0 35.0 40.0 30.0 41.0 29 36.48951097822586 39.0 35.0 40.0 30.0 41.0 30 36.30352530795549 38.0 35.0 40.0 30.0 41.0 31 36.04173731259837 38.0 35.0 40.0 29.0 41.0 32 35.89467831033163 38.0 35.0 40.0 29.0 41.0 33 35.698342378038284 38.0 34.0 40.0 27.0 41.0 34 35.58461610139793 38.0 34.0 40.0 27.0 41.0 35 35.32464818832433 38.0 34.0 40.0 26.0 41.0 36 35.17697337635899 38.0 34.0 40.0 25.0 41.0 37 35.01541549936292 38.0 33.0 40.0 25.0 41.0 38 34.92818423243575 38.0 33.0 40.0 25.0 41.0 39 34.830641191591766 38.0 33.0 40.0 24.0 41.0 40 34.71116398161484 38.0 33.0 40.0 24.0 41.0 41 34.50931310884639 38.0 33.0 40.0 23.0 41.0 42 34.2626256180886 38.0 33.0 40.0 22.0 41.0 43 33.92924974526951 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 2.0 15 4.0 16 15.0 17 28.0 18 97.0 19 226.0 20 455.0 21 865.0 22 1647.0 23 2699.0 24 4201.0 25 6516.0 26 9546.0 27 13327.0 28 17863.0 29 23300.0 30 29241.0 31 36443.0 32 43971.0 33 54299.0 34 66361.0 35 81155.0 36 103460.0 37 138721.0 38 176999.0 39 175873.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.7852201620957 20.926287173939905 13.64778116067974 23.640711503284656 2 19.276666686923566 23.26687045106035 34.73298369927419 22.723479162741892 3 19.63713818648095 24.582353405893542 32.4303821058666 23.350126301758905 4 13.922869835250648 16.32270453896313 35.967945484636154 33.786480141150065 5 12.596954577957659 38.49073955908836 35.00280558037026 13.909500282583725 6 32.85354870467266 37.138287765441326 13.441363370261659 16.566800159624357 7 26.552539303446306 32.65958890651239 21.213023564849422 19.574848225191886 8 27.443437676614828 34.18736415217792 18.614266122971525 19.754932048235727 9 24.904032945818873 14.146100850992285 21.17240848439915 39.77745771878969 10 16.6486380274643 27.371930826744777 33.157300889885526 22.822130255905392 11 33.802989513003915 22.289171270046733 23.01619133855556 20.89164787839379 12 21.476363238591823 27.024423741894708 30.452498587081365 21.046714432432104 13 31.630538489119008 20.814165243619584 25.783081033668992 21.77221523359242 14 20.921830656384266 22.627360181825917 27.232259515171403 29.218549646618413 15 23.176423401578823 29.353460587166445 24.945053164228746 22.525062847025985 16 22.42509505549377 27.9780172143119 25.953542830172243 23.643344900022083 17 22.27144648431407 26.50179577400594 26.519723128718407 24.70703461296158 18 23.427203798573508 25.40458089490924 28.841163637247575 22.32705166926968 19 23.264439623302724 24.63583161656123 29.93898622328368 22.16074253685236 20 24.1168498903089 24.326103646444206 29.776829754952306 21.780216708294592 21 23.04141117654089 25.124529280333185 30.104181226312086 21.72987831681383 22 21.930522891307564 25.636015954332848 29.52179540938178 22.911665744977807 23 22.669190676154997 25.861171375382604 30.50121642672371 20.96842152173869 24 22.8122043758951 25.883251394181006 28.149998278163675 23.154545951760223 25 22.632930828770466 25.85843669415528 29.321859826317358 22.1867726507569 26 22.40159705383676 26.57806299490134 29.336546077352992 21.683793873908915 27 21.520219422718924 26.61634853208389 28.8222234376361 23.04120860756109 28 21.960300531338433 26.18538302755546 29.131546269793525 22.722770171312586 29 22.31074486639563 26.240177936591856 28.5038862858775 22.945190911135015 30 22.06725695267381 26.367289971417517 30.10063626916556 21.464816806743116 31 22.71456612763061 26.153984835686174 29.87274616688848 21.25870286979474 32 22.26152060430378 25.930855104434436 28.957438231653832 22.85018605960795 33 21.981468989727727 26.00104525593578 29.621763200913993 22.3957225534225 34 21.475350393692814 26.405676793089967 29.984564243739097 22.134408569478122 35 20.961534176425427 28.45486459276545 29.03836453908467 21.545236691724448 36 23.089318740264027 26.17333017325725 28.81888104946937 21.918470037009353 37 22.022894346097203 26.86469810132095 28.841163637247575 22.271243915334267 38 21.769480552365096 25.616062909822368 30.154823471262553 22.459633066549987 39 21.397158767489298 25.394148592449444 30.813071371128654 22.395621268932604 40 20.507475808199587 26.015731506971413 30.486023753238573 22.99076893159043 41 21.702531504540584 24.934114439319448 30.600272657846812 22.763081398293153 42 20.559637320498563 26.680968036640678 30.17680220557105 22.58259243728971 43 20.82905406363502 26.368100247336724 29.396405210884435 23.40644047814382 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 64.0 1 120.5 2 177.0 3 398.5 4 620.0 5 620.0 6 1001.5 7 1383.0 8 1576.5 9 1770.0 10 2679.0 11 3588.0 12 3588.0 13 6883.5 14 10179.0 15 16509.0 16 22839.0 17 21034.0 18 19229.0 19 19229.0 20 20071.5 21 20914.0 22 16673.0 23 12432.0 24 14020.0 25 15608.0 26 15608.0 27 17362.0 28 19116.0 29 20847.0 30 22578.0 31 25170.0 32 27762.0 33 27762.0 34 31137.5 35 34513.0 36 38169.0 37 41825.0 38 45145.0 39 48465.0 40 48465.0 41 49913.0 42 51361.0 43 55043.0 44 58725.0 45 62024.0 46 65323.0 47 65323.0 48 82717.0 49 100111.0 50 94729.0 51 89347.0 52 83031.0 53 76715.0 54 76715.0 55 69481.5 56 62248.0 57 54236.5 58 46225.0 59 41745.5 60 37266.0 61 37266.0 62 33135.5 63 29005.0 64 25489.5 65 21974.0 66 18863.0 67 15752.0 68 15752.0 69 13434.0 70 11116.0 71 9375.5 72 7635.0 73 6286.5 74 4938.0 75 4938.0 76 3906.0 77 2874.0 78 2266.5 79 1659.0 80 1305.5 81 952.0 82 952.0 83 719.5 84 487.0 85 370.5 86 254.0 87 192.0 88 130.0 89 130.0 90 114.5 91 99.0 92 68.0 93 37.0 94 26.5 95 16.0 96 16.0 97 11.0 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 987318.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.333569335406956 #Duplication Level Percentage of deduplicated Percentage of total 1 85.51842513442013 49.88594982033506 2 8.442851903778747 9.850033738353005 3 2.3258339357618603 4.070225854632207 4 1.0251589078944283 2.3920471293387884 5 0.5666335126037465 1.652687764761792 6 0.3690629081086184 1.2917254043568611 7 0.26551034990096906 1.084171648365144 8 0.19897113522106163 0.9285357209729946 9 0.1576576034726596 0.8277057669083838 >10 0.9738460949720464 10.78400504083085 >50 0.09311017665327256 3.7819967065292475 >100 0.05526718272324492 6.019599714987575 >500 0.005055988186138384 2.0031092626647746 >1k 0.002092133042540021 2.4344245745535495 >5k 3.486888404233368E-4 1.8222843099323434 >10k+ 1.743444202116684E-4 1.1714975424774339 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11519 1.166696039168738 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9647 0.9770914740742092 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8271 0.8377240159705384 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4045 0.40969576164923566 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2557 0.25898444067666143 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2463 0.2494636986259746 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2369 0.2399429565752878 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2256 0.22849780921648344 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2130 0.2157359634889671 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1940 0.19649191040779163 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1357 0.1374430527955532 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1301 0.13177112136110147 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1274 0.12903644013377655 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1152 0.11667973236586388 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1093 0.1107039474617094 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.0256897980184703E-4 0.0 10 1.0128448990092351E-4 0.0 0.0 3.038534697027705E-4 0.0 11 1.0128448990092351E-4 0.0 0.0 5.064224495046175E-4 0.0 12 1.0128448990092351E-4 0.0 0.0 7.089914293064646E-4 0.0 13 1.0128448990092351E-4 0.0 0.0 7.089914293064646E-4 0.0 14 1.0128448990092351E-4 0.0 0.0 7.089914293064646E-4 0.0 15 1.0128448990092351E-4 0.0 0.0 9.115604091083116E-4 0.0 16 1.0128448990092351E-4 0.0 0.0 0.0014179828586129292 0.0 17 1.0128448990092351E-4 0.0 0.0 0.0019244053081175468 0.0 18 1.0128448990092351E-4 0.0 0.0 0.002430827757622164 0.0 19 1.0128448990092351E-4 0.0 0.0 0.0030385346970277054 0.0 20 1.0128448990092351E-4 0.0 0.0 0.004962940005145252 0.0 21 1.0128448990092351E-4 0.0 0.0 0.008507897151677575 1.0128448990092351E-4 22 2.0256897980184703E-4 0.0 0.0 0.014382397565931139 1.0128448990092351E-4 23 2.0256897980184703E-4 0.0 0.0 0.017724785732661615 1.0128448990092351E-4 24 2.0256897980184703E-4 0.0 0.0 0.024308277576221643 1.0128448990092351E-4 25 2.0256897980184703E-4 0.0 0.0 0.029575071051069664 1.0128448990092351E-4 26 2.0256897980184703E-4 0.0 0.0 0.038386821672450014 1.0128448990092351E-4 27 2.0256897980184703E-4 0.0 0.0 0.08973805805221823 1.0128448990092351E-4 28 2.0256897980184703E-4 0.0 0.0 0.1900097030541325 1.0128448990092351E-4 29 2.0256897980184703E-4 0.0 0.0 0.32552835054156815 1.0128448990092351E-4 30 2.0256897980184703E-4 0.0 0.0 0.5031813458277881 1.0128448990092351E-4 31 2.0256897980184703E-4 0.0 0.0 0.7129415244126006 1.0128448990092351E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3240 0.0 22.839506 1 GACCGTG 60 3.7256028E-5 21.583332 7 GTTATCG 45 0.0038254312 20.555557 11 AGTGTCG 45 0.0038254312 20.555557 8 CGCAATA 60 9.235561E-4 18.5 28 AGTACCG 110 3.849891E-8 18.5 5 ACCGTTA 195 0.0 18.025642 8 CGCCGTT 190 0.0 17.526316 25 TAATACT 205 0.0 17.146343 4 ATACTGA 130 1.3922545E-8 17.076923 6 GGGTTAG 65 0.0015797205 17.076923 7 TAGGCGA 65 0.0015797205 17.076923 4 CTAATAC 195 0.0 17.076923 3 CCGTTTA 185 1.8189894E-12 17.0 27 GGACCGT 240 0.0 16.958332 6 GTATTGG 395 0.0 16.86076 1 ATAGAAC 110 7.804865E-7 16.818182 3 GACCGTT 210 0.0 16.738094 7 ATAGTAC 155 4.0017767E-10 16.709679 3 TCGTATA 90 4.444934E-5 16.444445 30 >>END_MODULE