##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088452_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1290241 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.448663466747686 31.0 31.0 34.0 30.0 34.0 2 31.558488685447138 31.0 31.0 34.0 30.0 34.0 3 31.70779025003856 31.0 31.0 34.0 30.0 34.0 4 35.415079043372515 37.0 35.0 37.0 33.0 37.0 5 35.30287287413747 37.0 35.0 37.0 33.0 37.0 6 35.38933114046136 37.0 35.0 37.0 33.0 37.0 7 35.213326812587724 37.0 35.0 37.0 32.0 37.0 8 35.273469840130645 37.0 35.0 37.0 32.0 37.0 9 36.825759683656 39.0 37.0 39.0 32.0 39.0 10 36.68893020761238 39.0 35.0 39.0 32.0 39.0 11 36.71649792558134 39.0 35.0 39.0 32.0 39.0 12 36.56489911574659 38.0 35.0 39.0 32.0 39.0 13 36.57575135187922 39.0 35.0 39.0 32.0 39.0 14 37.50055919785528 39.0 36.0 41.0 32.0 41.0 15 37.5365718497552 39.0 36.0 41.0 32.0 41.0 16 37.41093408130729 39.0 36.0 41.0 32.0 41.0 17 37.51169355182481 39.0 36.0 41.0 32.0 41.0 18 37.39377139619653 39.0 36.0 41.0 32.0 41.0 19 37.483811163960844 39.0 36.0 41.0 32.0 41.0 20 37.392987046606024 39.0 36.0 41.0 32.0 41.0 21 37.23982031263927 39.0 36.0 41.0 31.0 41.0 22 37.13726427853401 39.0 36.0 40.0 31.0 41.0 23 36.93340158931549 39.0 36.0 40.0 31.0 41.0 24 37.11349895097118 39.0 36.0 41.0 31.0 41.0 25 37.08561888825421 39.0 36.0 41.0 31.0 41.0 26 36.896703794097384 39.0 36.0 40.0 31.0 41.0 27 36.83596242872456 39.0 35.0 40.0 30.0 41.0 28 36.64409749806431 39.0 35.0 40.0 30.0 41.0 29 36.46656089831279 39.0 35.0 40.0 30.0 41.0 30 36.24818386642495 38.0 35.0 40.0 30.0 41.0 31 35.9612987031105 38.0 35.0 40.0 29.0 41.0 32 35.81590183539354 38.0 35.0 40.0 29.0 41.0 33 35.59183051848453 38.0 34.0 40.0 27.0 41.0 34 35.464595374042524 38.0 34.0 40.0 27.0 41.0 35 35.19773592685397 38.0 34.0 40.0 26.0 41.0 36 35.04028859724656 38.0 34.0 40.0 25.0 41.0 37 34.8628643796004 38.0 33.0 40.0 25.0 41.0 38 34.74511195970365 38.0 33.0 40.0 24.0 41.0 39 34.62351452170564 38.0 33.0 40.0 24.0 41.0 40 34.46488369227144 38.0 33.0 40.0 23.0 41.0 41 34.22457897400563 38.0 33.0 40.0 22.0 41.0 42 33.943626810805114 38.0 33.0 40.0 20.0 41.0 43 33.59127558339876 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 2.0 14 1.0 15 6.0 16 28.0 17 51.0 18 99.0 19 257.0 20 547.0 21 1123.0 22 2161.0 23 3597.0 24 5746.0 25 8786.0 26 12864.0 27 17642.0 28 24278.0 29 31119.0 30 38973.0 31 48164.0 32 59147.0 33 72215.0 34 87996.0 35 107966.0 36 137264.0 37 184174.0 38 226090.0 39 219944.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.82017158034817 21.13023845932659 14.197812656705219 22.851777303620022 2 19.127976866337374 23.885460158218503 35.006173265304696 21.980389710139423 3 19.926122329084254 24.57478874101815 33.09645252321078 22.402636406686813 4 13.777581087564261 16.281531899854368 36.001336184480266 33.939550828101105 5 12.411479715805033 38.71594531564258 34.80125030905079 14.071324659501597 6 32.2966794575587 37.242809676641805 13.032991510888275 17.427519354911215 7 26.051644615230796 33.1796927860764 20.923532890366996 19.84512970832581 8 27.563687714155726 34.00426741980762 18.52925151192684 19.902793354109814 9 24.51611753153093 14.420329225315271 21.656884256507116 39.40666898664668 10 16.852355490175867 27.3882166199958 32.71946868840783 23.03995920142051 11 33.11373611596593 22.408371769305113 23.503593514699965 20.974298600028987 12 21.611311375161694 27.436114648348642 30.41160527374343 20.54096870274623 13 32.209253930079726 20.752789595122152 26.100162682785623 20.9377937920125 14 20.632346980137818 23.149396120569723 27.662583966871306 28.55567293242115 15 22.697542552127857 29.462170245713786 25.654121981862303 22.186165220296054 16 21.663007143626658 28.431122557723715 26.48590457131652 23.41996572733311 17 21.995115641186413 26.524269496938945 26.6758690818227 24.80474578005194 18 23.388266223131957 25.11569543984418 29.538667582257887 21.95737075476597 19 23.05670025987393 24.289570708108023 30.792309343758262 21.86141968825979 20 24.04651534093243 24.033649527491377 30.54723884917624 21.372596282399954 21 22.73389235034385 24.99587286406183 31.19308718293714 21.077147602657178 22 21.185809472803918 25.479503441605093 30.741156109595032 22.593530975995957 23 22.4058916124972 25.780687483966176 31.684855775006376 20.12856512853025 24 22.324588972137764 25.768209195026355 28.983189962185357 22.92401187065052 25 22.11772839337767 26.028005620655364 30.23427406197757 21.619991923989392 26 21.891104065054513 26.87474665585732 30.21001502820016 21.024134250888014 27 20.763330261555787 26.950933972800428 29.744443092414517 22.541292673229265 28 21.300594230070196 26.441416758574558 29.824893178871235 22.43309583248401 29 21.700984544747843 26.3956113625284 29.116420885710497 22.786983207013265 30 21.443048236724767 26.646494724628965 31.23059955465684 20.679857483989426 31 22.26522021854832 26.297102634314058 30.946389085449926 20.4912880616877 32 21.914433040028953 26.137830064305817 29.601059026956978 22.346677868708248 33 21.501564436411492 26.20944459213434 30.304571006501885 21.984419964952284 34 20.60188755434062 27.004722373572072 30.89422828758348 21.499161784503826 35 20.142361000774272 29.261975088374964 29.676393789997373 20.91927012085339 36 22.638328808338905 26.486989639919983 29.56184154743184 21.312840004309273 37 21.48916365237192 27.45440580480701 29.43651612373192 21.61991441908915 38 21.354692650442825 25.653269427959586 31.05528347029741 21.93675445130018 39 20.796037329460155 25.655517070066754 31.723608225130036 21.824837375343055 40 19.540922974855086 26.380575411880415 31.386849433555437 22.691652179709063 41 21.286410833324936 25.05276146084336 31.440482824526583 22.22034488130512 42 19.73298011766794 27.26188363259267 30.843927607322975 22.161208642416415 43 20.043697262759437 27.14624632142367 29.941925578244682 22.868130837572206 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 142.0 2 203.0 3 580.0 4 957.0 5 957.0 6 1556.0 7 2155.0 8 2392.0 9 2629.0 10 4149.5 11 5670.0 12 5670.0 13 10941.5 14 16213.0 15 26807.0 16 37401.0 17 33839.0 18 30277.0 19 30277.0 20 31290.5 21 32304.0 22 24958.5 23 17613.0 24 19651.0 25 21689.0 26 21689.0 27 23374.5 28 25060.0 29 26982.5 30 28905.0 31 31862.0 32 34819.0 33 34819.0 34 38829.0 35 42839.0 36 47269.0 37 51699.0 38 55097.0 39 58495.0 40 58495.0 41 60618.0 42 62741.0 43 68001.5 44 73262.0 45 78937.5 46 84613.0 47 84613.0 48 114265.0 49 143917.0 50 135042.5 51 126168.0 52 115493.5 53 104819.0 54 104819.0 55 92472.5 56 80126.0 57 67808.0 58 55490.0 59 48718.0 60 41946.0 61 41946.0 62 37047.0 63 32148.0 64 27711.0 65 23274.0 66 20439.0 67 17604.0 68 17604.0 69 15191.0 70 12778.0 71 10827.0 72 8876.0 73 7332.0 74 5788.0 75 5788.0 76 4631.5 77 3475.0 78 2736.5 79 1998.0 80 1540.5 81 1083.0 82 1083.0 83 813.5 84 544.0 85 420.0 86 296.0 87 222.0 88 148.0 89 148.0 90 116.0 91 84.0 92 57.5 93 31.0 94 24.0 95 17.0 96 17.0 97 11.0 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1290241.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.42869836727485 #Duplication Level Percentage of deduplicated Percentage of total 1 83.18557329161851 42.781257573234825 2 9.525241315883504 9.797415250201539 3 2.72837810158146 4.209508032543327 4 1.2386189365552067 2.5480223872036984 5 0.6716410606356935 1.727081275925482 6 0.45355926292689464 1.3995577514850464 7 0.3128253146054863 1.1261739122545391 8 0.23853565069222016 0.9814062423433462 9 0.1929462157436812 0.8930675457530026 >10 1.2483403983343238 12.24962235270765 >50 0.1131119465004369 4.057913723154365 >100 0.08001437579847989 7.44977056125656 >500 0.006970945131233466 2.5986275464712385 >1k 0.0036370148510783303 4.025873632862019 >5k 1.5154228546159708E-4 0.5024548418588631 >10k+ 4.546268563847913E-4 3.6522473707445395 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18656 1.4459314190139672 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15152 1.1743542485473646 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13054 1.011748967828491 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6447 0.49967409189446005 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4504 0.3490820707139209 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4189 0.32466802713601567 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3912 0.30319916976750855 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3782 0.2931235327353572 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3547 0.2749098811772374 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3297 0.2555336561154079 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2229 0.17275842265127211 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2224 0.17237089815003553 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2026 0.15702492790106654 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1995 0.1546222759933997 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1972 0.15283966328771137 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1607 0.12455037469744025 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 1582 0.1226127521912573 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1511 0.1171099042736977 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1499 0.11617984547072989 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 1488 0.11532729156800939 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1467 0.11369968866281571 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1366 0.10587169373783659 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 1316 0.10199644872547066 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 7.750490024731813E-5 0.0 0.0 0.0 0.0 7 7.750490024731813E-5 0.0 0.0 0.0 0.0 8 7.750490024731813E-5 0.0 0.0 0.0 0.0 9 1.5500980049463627E-4 0.0 0.0 1.5500980049463627E-4 0.0 10 2.3251470074195442E-4 0.0 0.0 3.1001960098927254E-4 0.0 11 2.3251470074195442E-4 0.0 0.0 6.200392019785451E-4 0.0 12 2.3251470074195442E-4 0.0 0.0 8.525539027204995E-4 0.0 13 2.3251470074195442E-4 0.0 0.0 9.300588029678177E-4 0.0 14 2.3251470074195442E-4 0.0 0.0 0.0010850686034624538 0.0 15 2.3251470074195442E-4 0.0 0.0 0.0013175833042044084 0.0 16 2.3251470074195442E-4 0.0 0.0 0.0018601176059356353 0.0 17 2.3251470074195442E-4 0.0 0.0 0.003565225411376634 0.0 18 2.3251470074195442E-4 0.0 0.0 0.004495284214344452 0.0 19 2.3251470074195442E-4 0.0 0.0 0.005347838117064951 0.0 20 2.3251470074195442E-4 0.0 0.0 0.008990568428688905 0.0 21 2.3251470074195442E-4 0.0 0.0 0.015423475149216308 0.0 22 2.3251470074195442E-4 0.0 0.0 0.025111587680131078 0.0 23 2.3251470074195442E-4 0.0 0.0 0.03177700910140044 0.0 24 2.3251470074195442E-4 0.0 0.0 0.04131011183182057 0.0 25 2.3251470074195442E-4 0.0 0.0 0.047200484250616744 0.0 26 2.3251470074195442E-4 0.0 0.0 0.059213743788951057 0.0 27 2.3251470074195442E-4 0.0 0.0 0.1174974287749343 0.0 28 2.3251470074195442E-4 0.0 0.0 0.24987579839735366 0.0 29 2.3251470074195442E-4 0.0 0.0 0.42030907404120627 0.0 30 2.3251470074195442E-4 0.0 0.0 0.6615818285111076 0.0 31 3.1001960098927254E-4 0.0 0.0 0.9256410236537205 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5450 0.0 22.811008 1 GTATTGG 715 0.0 20.6993 1 CAATGCG 55 5.143565E-4 20.181818 19 ATTGGAC 835 0.0 19.053892 3 TATTGGA 780 0.0 18.73718 2 TGCGACG 60 9.237654E-4 18.5 22 TATACTG 175 0.0 17.97143 5 TAGGGGT 125 8.580173E-9 17.76 4 TTGGACC 990 0.0 17.565657 4 TGGACCC 930 0.0 17.505377 5 ACCGTTA 270 0.0 17.12963 8 CCGTTTA 270 0.0 16.444445 27 GGACCCT 980 0.0 16.42347 6 TGTTACG 160 6.2937033E-10 16.1875 16 CGAACTA 195 1.8189894E-12 16.128206 24 CCTAGAT 70 0.002592724 15.857143 3 TATACAG 140 3.473724E-8 15.857143 5 TCTATAC 130 2.589477E-7 15.653846 3 GACCGTT 320 0.0 15.609375 7 GTTTAGG 155 7.208655E-9 15.5161295 1 >>END_MODULE