##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088451_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1624290 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.479538752316397 31.0 31.0 34.0 30.0 34.0 2 31.586471627603444 31.0 31.0 34.0 30.0 34.0 3 31.747494597639584 31.0 31.0 34.0 30.0 34.0 4 35.44537367095777 37.0 35.0 37.0 33.0 37.0 5 35.33043791441184 37.0 35.0 37.0 33.0 37.0 6 35.40677403665602 37.0 35.0 37.0 33.0 37.0 7 35.26701943618443 37.0 35.0 37.0 32.0 37.0 8 35.297062716633114 37.0 35.0 37.0 32.0 37.0 9 36.864515572958034 39.0 37.0 39.0 33.0 39.0 10 36.707715371023646 39.0 35.0 39.0 32.0 39.0 11 36.74711720197748 39.0 35.0 39.0 32.0 39.0 12 36.614859415498465 39.0 35.0 39.0 32.0 39.0 13 36.62141120120175 39.0 35.0 39.0 32.0 39.0 14 37.61444384931262 39.0 36.0 41.0 32.0 41.0 15 37.63005251525282 39.0 36.0 41.0 32.0 41.0 16 37.50800903779498 39.0 36.0 41.0 32.0 41.0 17 37.57243103140449 39.0 36.0 41.0 32.0 41.0 18 37.456359393950585 39.0 36.0 41.0 32.0 41.0 19 37.53625584101361 39.0 36.0 41.0 32.0 41.0 20 37.433762443898566 39.0 36.0 41.0 32.0 41.0 21 37.27746769357689 39.0 36.0 41.0 31.0 41.0 22 37.16960579699438 39.0 36.0 40.0 31.0 41.0 23 36.9806272278965 39.0 36.0 40.0 31.0 41.0 24 37.173032524980144 39.0 36.0 41.0 31.0 41.0 25 37.15041895228069 39.0 36.0 41.0 31.0 41.0 26 36.9829328506609 39.0 36.0 41.0 31.0 41.0 27 36.90601801402459 39.0 36.0 41.0 31.0 41.0 28 36.713726612858544 39.0 35.0 40.0 30.0 41.0 29 36.565804135960946 39.0 35.0 40.0 30.0 41.0 30 36.396134310991265 38.0 35.0 40.0 30.0 41.0 31 36.16731002468771 38.0 35.0 40.0 30.0 41.0 32 36.00725978735324 38.0 35.0 40.0 29.0 41.0 33 35.80410702522333 38.0 35.0 40.0 28.0 41.0 34 35.69863324898879 38.0 34.0 40.0 27.0 41.0 35 35.46158998700971 38.0 34.0 40.0 27.0 41.0 36 35.301305801303954 38.0 34.0 40.0 26.0 41.0 37 35.14985809184321 38.0 34.0 40.0 25.0 41.0 38 35.0648831181624 38.0 34.0 40.0 25.0 41.0 39 34.964957612249044 38.0 33.0 40.0 24.0 41.0 40 34.85386907510358 38.0 33.0 40.0 24.0 41.0 41 34.640118451754304 38.0 33.0 40.0 23.0 41.0 42 34.43166368074667 38.0 33.0 40.0 23.0 41.0 43 34.08287497922169 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 1.0 14 6.0 15 12.0 16 24.0 17 63.0 18 154.0 19 323.0 20 732.0 21 1362.0 22 2585.0 23 4355.0 24 6939.0 25 10396.0 26 14726.0 27 20956.0 28 28060.0 29 36597.0 30 46454.0 31 57799.0 32 71263.0 33 88215.0 34 108667.0 35 132859.0 36 170154.0 37 228467.0 38 293933.0 39 299186.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.29971248976476 21.249592129484267 13.47862758497559 22.972067795775388 2 18.668587505925665 24.00341072099194 35.10684668378184 22.221155089300556 3 19.542446238048626 26.10746849392658 32.07493735724532 22.27514791077948 4 13.726982250706463 17.115293451292565 37.19766790413042 31.960056393870552 5 12.598981708931287 39.07251783856331 34.76780624149629 13.560694211009118 6 31.095863423403458 38.29291567392522 14.360859206176238 16.250361696495084 7 26.050520535126115 32.82775858990698 22.451717365741338 18.67000350922557 8 27.096516016228627 34.76497423489648 19.346729955857636 18.79177979301726 9 25.396142314488173 14.33771063049086 21.475290742416686 38.79085631260428 10 16.67694808193118 27.76696279605243 33.28143373412383 22.274655387892555 11 33.334256813746315 23.24098529203529 23.125550240412736 20.299207653805663 12 20.658133707650727 27.646109992673722 30.92046371029804 20.77529258937751 13 30.619409095666416 21.697418564418918 26.25239335340364 21.43077898651103 14 20.85163363685056 22.80645697504756 28.172740089516036 28.169169298585846 15 23.49364953302674 29.41845360126578 25.329405463310124 21.758491402397357 16 21.734727173103323 28.50667060684976 26.764001502194805 22.994600717852105 17 21.609380098381447 27.59642674645538 27.576787396339324 23.217405758823855 18 22.469571320392294 26.125137752494936 29.35276336122244 22.05252756589033 19 23.235444409557406 25.532386458083224 30.25580407439558 20.976365057963786 20 23.190193869321366 25.588903459357624 30.221265906950112 20.999636764370894 21 22.37685388692906 26.037530243983525 30.481625818049736 21.103990051037684 22 21.50748942614927 26.533131398949696 30.238996730879336 21.720382444021695 23 21.80903656366782 26.683227748739448 30.813709374557497 20.694026313035234 24 21.874234280824236 26.866877220200823 29.271989607767086 21.98689889120785 25 21.732079862586115 26.75433574053894 30.02702719341989 21.48655720345505 26 21.665343011408062 27.19994582248244 29.990642065148464 21.144069100961037 27 21.355299854090095 27.318951665035186 29.597916628188315 21.727831852686403 28 21.267138257330895 27.137333850482364 29.87994754631254 21.715580345874198 29 21.677717648942 27.199576430317247 29.514187737411422 21.60851818332933 30 21.396979603395945 27.36537194712767 30.332452948672962 20.905195500803426 31 21.657647341299892 27.13819576553448 30.266701143268754 20.937455749896877 32 21.235370531124367 27.109383176649487 29.830879953702848 21.824366338523294 33 21.168510549224585 27.17802855401437 30.160439330415134 21.49302156634591 34 20.928713468654 27.31488835121807 30.377888184991598 21.378509995136337 35 20.61959379174901 28.394560084713937 29.767221370568066 21.21862475296899 36 21.77025038632264 27.14730743894255 29.646368567189356 21.43607360754545 37 21.08324252442606 27.20881123444705 29.752260987877783 21.955685253249115 38 20.96411355115158 26.6257257016912 30.52349026343818 21.88667048371904 39 20.678696538179757 26.580044203929106 30.784527393507314 21.956731864383823 40 20.137044493286297 27.009770422769336 30.74161633698416 22.111568746960213 41 20.752821232661656 26.059262816369 30.88998885666968 22.297927094299663 42 19.784336540888635 27.208995930529646 30.633199736500256 22.373467792081463 43 20.120114019048323 26.79127495705816 30.242013433561745 22.846597590331776 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 75.0 1 215.5 2 356.0 3 848.0 4 1340.0 5 1340.0 6 2110.5 7 2881.0 8 3325.5 9 3770.0 10 5601.5 11 7433.0 12 7433.0 13 13017.0 14 18601.0 15 28390.0 16 38179.0 17 36588.5 18 34998.0 19 34998.0 20 37336.0 21 39674.0 22 33546.5 23 27419.0 24 30223.0 25 33027.0 26 33027.0 27 36603.5 28 40180.0 29 44130.5 30 48081.0 31 52826.0 32 57571.0 33 57571.0 34 63143.5 35 68716.0 36 74205.5 37 79695.0 38 83654.0 39 87613.0 40 87613.0 41 89683.5 42 91754.0 43 96332.0 44 100910.0 45 101856.0 46 102802.0 47 102802.0 48 117272.0 49 131742.0 50 127120.0 51 122498.0 52 114982.0 53 107466.0 54 107466.0 55 98848.0 56 90230.0 57 80103.5 58 69977.0 59 63623.5 60 57270.0 61 57270.0 62 51796.0 63 46322.0 64 41014.0 65 35706.0 66 30968.0 67 26230.0 68 26230.0 69 22834.5 70 19439.0 71 16283.0 72 13127.0 73 10767.5 74 8408.0 75 8408.0 76 6709.0 77 5010.0 78 3881.0 79 2752.0 80 2091.0 81 1430.0 82 1430.0 83 1101.5 84 773.0 85 609.5 86 446.0 87 329.5 88 213.0 89 213.0 90 161.5 91 110.0 92 74.0 93 38.0 94 28.5 95 19.0 96 19.0 97 13.5 98 8.0 99 4.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1624290.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.0231807670524 #Duplication Level Percentage of deduplicated Percentage of total 1 85.54127883032353 54.76624757598636 2 9.055058750859821 11.594673265251561 3 2.4341808082931253 4.6753199372712135 4 0.9549260910375276 2.4454962298268144 5 0.48771468922998984 1.5612522855659212 6 0.27113337707664864 1.0415292727535792 7 0.1978913100995494 0.8868741783112591 8 0.1432879180802274 0.7338998624787995 9 0.09883612800058628 0.5695022960367357 >10 0.7093585011651005 8.568582731802465 >50 0.06539608322893592 2.923793672525659 >100 0.0368825539851418 4.56304046052808 >500 0.002703305746583007 1.2582496701448334 >1k 9.654663380653596E-4 1.1107656991797337 >5k 9.654663380653596E-5 0.4069098830105835 >10k+ 2.8963990141960786E-4 2.893862979326521 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 17753 1.0929698514427841 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15473 0.9526008286697573 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13591 0.8367348195211446 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6583 0.4052847705766827 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2491 0.15335931391561852 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2028 0.12485455183495557 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1990 0.1225150681220718 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1962 0.12079123801784163 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1889 0.11629696667467017 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1726 0.10626181285361605 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1643 0.10115188790179093 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 6.156536086536271E-5 0.0 0.0 6.156536086536271E-5 0.0 9 6.156536086536271E-5 0.0 0.0 3.0782680432681357E-4 0.0 10 6.156536086536271E-5 6.156536086536271E-5 0.0 3.0782680432681357E-4 0.0 11 6.156536086536271E-5 6.156536086536271E-5 0.0 5.540882477882644E-4 0.0 12 6.156536086536271E-5 6.156536086536271E-5 0.0 7.387843303843525E-4 0.0 13 6.156536086536271E-5 6.156536086536271E-5 0.0 7.387843303843525E-4 0.0 14 6.156536086536271E-5 6.156536086536271E-5 0.0 8.003496912497152E-4 0.0 15 6.156536086536271E-5 6.156536086536271E-5 0.0 0.001046611134711166 0.0 16 6.156536086536271E-5 6.156536086536271E-5 0.0 0.0015391340216340677 0.0 17 6.156536086536271E-5 6.156536086536271E-5 0.0 0.002401049073749146 0.0 18 6.156536086536271E-5 6.156536086536271E-5 0.0 0.00295513732153741 0.0 19 6.156536086536271E-5 6.156536086536271E-5 0.0 0.003693921651921763 0.0 20 6.156536086536271E-5 6.156536086536271E-5 0.0 0.006649058973459173 0.0 21 6.156536086536271E-5 6.156536086536271E-5 0.0 0.012189941451341817 0.0 22 6.156536086536271E-5 6.156536086536271E-5 0.0 0.020562830529031146 0.0 23 6.156536086536271E-5 6.156536086536271E-5 0.0 0.025919016924317702 0.0 24 6.156536086536271E-5 6.156536086536271E-5 0.0 0.035092255693256746 0.0 25 6.156536086536271E-5 6.156536086536271E-5 0.0 0.0404484420885433 0.0 26 6.156536086536271E-5 6.156536086536271E-5 0.0 0.04894446188796336 0.0 27 6.156536086536271E-5 6.156536086536271E-5 0.0 0.0969038780020809 0.0 28 6.156536086536271E-5 6.156536086536271E-5 0.0 0.19362305992156573 0.0 29 6.156536086536271E-5 1.8469608259608813E-4 0.0 0.3152146476306571 0.0 30 6.156536086536271E-5 1.8469608259608813E-4 0.0 0.4675889157724298 0.0 31 6.156536086536271E-5 1.8469608259608813E-4 0.0 0.6763570544668748 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4290 0.0 26.952213 1 TATACGG 120 5.178663E-9 18.5 2 GTATCAA 6900 0.0 16.757248 2 CTCTAAT 415 0.0 16.048193 1 CTAATAC 435 0.0 15.310344 3 ATTGGAC 525 0.0 15.15238 3 TCTAATA 490 0.0 14.724489 2 AATACTG 530 0.0 14.6603775 5 TATACAG 380 0.0 14.605264 5 TACACAG 280 0.0 14.535714 5 TTGGACC 575 0.0 14.478261 4 GTCTAAC 115 2.2108445E-5 14.478261 1 GTATTGG 505 0.0 14.287129 1 ACCGTTA 235 3.6379788E-12 14.170212 8 TAGGACC 355 0.0 14.070422 4 TAATACT 505 0.0 13.920793 4 CTAGGGC 80 0.006300099 13.875 3 GGACCGT 295 0.0 13.79661 6 ATACTGG 460 0.0 13.673913 6 ATGCTAG 395 0.0 13.582278 15 >>END_MODULE