##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088450_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1342241 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.45545993603235 31.0 31.0 34.0 30.0 34.0 2 31.571962859128874 31.0 31.0 34.0 30.0 34.0 3 31.718768835104875 31.0 31.0 34.0 30.0 34.0 4 35.420949740024334 37.0 35.0 37.0 33.0 37.0 5 35.3040221539947 37.0 35.0 37.0 33.0 37.0 6 35.38774780385937 37.0 35.0 37.0 33.0 37.0 7 35.222549452743586 37.0 35.0 37.0 32.0 37.0 8 35.275162955087794 37.0 35.0 37.0 32.0 37.0 9 36.82564233993746 39.0 37.0 39.0 32.0 39.0 10 36.68205113686737 39.0 35.0 39.0 32.0 39.0 11 36.716015976266554 39.0 35.0 39.0 32.0 39.0 12 36.57061734815134 38.0 35.0 39.0 32.0 39.0 13 36.58122125609336 39.0 35.0 39.0 32.0 39.0 14 37.52401021873121 39.0 36.0 41.0 32.0 41.0 15 37.560429907892846 39.0 36.0 41.0 32.0 41.0 16 37.43347059134686 39.0 36.0 41.0 32.0 41.0 17 37.52469191449226 39.0 36.0 41.0 32.0 41.0 18 37.401732624767085 39.0 36.0 41.0 32.0 41.0 19 37.49213665802192 39.0 36.0 41.0 32.0 41.0 20 37.397207356950055 39.0 36.0 41.0 32.0 41.0 21 37.26113268779601 39.0 36.0 41.0 31.0 41.0 22 37.15620741729689 39.0 36.0 40.0 31.0 41.0 23 36.953697584859945 39.0 36.0 40.0 31.0 41.0 24 37.141883611065374 39.0 36.0 41.0 31.0 41.0 25 37.12097082416645 39.0 36.0 41.0 31.0 41.0 26 36.93584535117017 39.0 36.0 41.0 31.0 41.0 27 36.86759605763793 39.0 35.0 40.0 31.0 41.0 28 36.66897524364104 39.0 35.0 40.0 30.0 41.0 29 36.494316594411885 39.0 35.0 40.0 30.0 41.0 30 36.31805316630918 38.0 35.0 40.0 30.0 41.0 31 36.038241269637865 38.0 35.0 40.0 29.0 41.0 32 35.90222173216285 38.0 35.0 40.0 29.0 41.0 33 35.69175431237758 38.0 34.0 40.0 28.0 41.0 34 35.5915562108444 38.0 34.0 40.0 27.0 41.0 35 35.336451501630485 38.0 34.0 40.0 26.0 41.0 36 35.17527552801621 38.0 34.0 40.0 26.0 41.0 37 35.01395502000013 38.0 34.0 40.0 25.0 41.0 38 34.902619574279136 38.0 33.0 40.0 25.0 41.0 39 34.786175507975095 38.0 33.0 40.0 24.0 41.0 40 34.644464742173724 38.0 33.0 40.0 23.0 41.0 41 34.410052293142584 38.0 33.0 40.0 23.0 41.0 42 34.151524949692345 38.0 33.0 40.0 21.0 41.0 43 33.80502905215978 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 0.0 13 0.0 14 1.0 15 7.0 16 16.0 17 54.0 18 110.0 19 260.0 20 580.0 21 1162.0 22 2148.0 23 3581.0 24 5825.0 25 8967.0 26 12876.0 27 18097.0 28 24164.0 29 31658.0 30 39582.0 31 48996.0 32 60523.0 33 75002.0 34 91015.0 35 111121.0 36 142004.0 37 189769.0 38 236568.0 39 238153.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.66613894226149 21.171011763163246 14.236489572289923 22.92635972228534 2 19.106255881022857 23.893324671202862 34.80433096589957 22.196088481874714 3 19.69541982401074 24.743172053304882 32.958686256789946 22.602721865894427 4 13.962097715685932 16.340657154713647 35.88565689768082 33.8115882319196 5 12.392632917635508 38.81545862479242 34.752626391236745 14.039282066335328 6 32.27460642313862 37.286672065597756 13.235402584185701 17.203318927077923 7 25.88186473219042 33.25356623735976 21.160730450045858 19.703838580403964 8 27.6171715809605 34.02764481192275 18.647843420071357 19.707340187045396 9 24.632014668006715 14.355022682215788 21.65102988211506 39.36193276766244 10 16.645147927980148 27.68385111168561 32.87248713159559 22.798513828738653 11 33.15619177182041 22.64317659794329 23.26027889179365 20.940352738442648 12 21.418582802939262 27.45952477982717 30.59100414903136 20.530888268202208 13 32.1419178821091 20.970153646029292 25.899447267666538 20.98848120419507 14 20.698369368839128 23.311312946035773 27.638553732153916 28.351763952971186 15 22.642431575253624 29.887404720910776 25.27929038078855 22.190873323047054 16 21.769041476158158 28.466944460793552 26.29416028865159 23.469853774396697 17 22.0239137382929 26.87244690037035 26.582484069552336 24.52115529178441 18 23.364656570615857 25.29866097071986 29.282893310515774 22.053789148148507 19 23.034835025900712 24.747120673560115 30.574762654396643 21.643281646142533 20 23.935641959975893 24.49835759748063 30.23413828068134 21.33186216186214 21 22.772140025524475 25.210524786532375 30.85548720386279 21.161847984080357 22 21.43244022496705 25.68055960144266 30.442968140594722 22.444032032995565 23 22.39240196060171 25.96106064410192 31.268155271668796 20.378382123627574 24 22.113018451976956 25.98557189059193 29.000827720208218 22.900581937222896 25 22.17165173765367 26.247372863740566 29.99893461755378 21.582040781051987 26 21.883402459021887 26.905898419136353 29.96645162828434 21.244247493557417 27 20.767581976709103 27.007221504930932 29.596249853789296 22.62894666457067 28 21.33335220724147 26.667789167519096 29.58283944537531 22.416019179864122 29 21.526387586133936 26.562368456931356 29.066687725974695 22.844556230960013 30 21.432067713622217 26.883175227101543 30.8503465473041 20.83441051197214 31 22.271633782606852 26.534877119682683 30.696797370963935 20.496691726746537 32 21.761367742454595 26.482651029137095 29.47279959411164 22.28318163429667 33 21.382449202490463 26.462609918785073 30.12774904059703 22.02719183812743 34 20.537742476947134 27.057883047828224 30.667890490604893 21.73648398461975 35 20.126266445444596 29.127183568375575 29.699137487232175 21.047412498947654 36 22.473013415623573 26.70585982696103 29.494554256649884 21.32657250076551 37 21.458292512298463 27.496477905234606 29.428321739538575 21.616907842928356 38 21.181814592163402 25.99384164244722 30.877837884552772 21.9465058808366 39 20.759237722584842 25.751485761498866 31.635749466750006 21.85352704916628 40 19.572118568871012 26.26182630392009 31.482423797216747 22.683631329992153 41 20.826066257847884 25.273181194733287 31.56452529761794 22.336227249800896 42 19.663309346086137 27.088428978104528 31.004789750871865 22.243471924937474 43 19.831609971681686 27.071218953973244 30.266546767681813 22.83062430666326 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 79.0 1 159.5 2 240.0 3 598.5 4 957.0 5 957.0 6 1584.5 7 2212.0 8 2600.5 9 2989.0 10 4494.5 11 6000.0 12 6000.0 13 11490.5 14 16981.0 15 27035.5 16 37090.0 17 33831.5 18 30573.0 19 30573.0 20 31789.5 21 33006.0 22 25994.5 23 18983.0 24 21019.0 25 23055.0 26 23055.0 27 25166.0 28 27277.0 29 29815.0 30 32353.0 31 35222.0 32 38091.0 33 38091.0 34 41859.5 35 45628.0 36 49985.0 37 54342.0 38 57976.5 39 61611.0 40 61611.0 41 64058.5 42 66506.0 43 71289.0 44 76072.0 45 81862.5 46 87653.0 47 87653.0 48 116010.5 49 144368.0 50 135753.0 51 127138.0 52 116875.5 53 106613.0 54 106613.0 55 94827.5 56 83042.0 57 71766.5 58 60491.0 59 53275.0 60 46059.0 61 46059.0 62 40706.5 63 35354.0 64 30485.5 65 25617.0 66 21907.5 67 18198.0 68 18198.0 69 15381.0 70 12564.0 71 10449.5 72 8335.0 73 6939.5 74 5544.0 75 5544.0 76 4369.0 77 3194.0 78 2528.0 79 1862.0 80 1425.5 81 989.0 82 989.0 83 767.5 84 546.0 85 416.5 86 287.0 87 223.0 88 159.0 89 159.0 90 134.5 91 110.0 92 76.0 93 42.0 94 31.0 95 20.0 96 20.0 97 13.0 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1342241.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.38611107717605 #Duplication Level Percentage of deduplicated Percentage of total 1 83.92794012090427 46.48442214014984 2 9.401505182129197 10.41425620620108 3 2.6426412995357915 4.390968736596666 4 1.1191035838032473 2.4793118159756977 5 0.6157781925135714 1.705277968472968 6 0.39878561612635127 1.3252310658452509 7 0.2817042893085577 1.09217535409925 8 0.2182191806644228 0.9669049423560055 9 0.16034744809631343 0.7992919414083721 >10 1.072422879112158 11.321285538419753 >50 0.09716563736255888 3.734943826130395 >100 0.05520779007250453 5.573314088866402 >500 0.005129318442646858 2.019751714582024 >1k 0.0035095336712846923 3.7709607818891504 >5k 1.3498206428018048E-4 0.4817619206679954 >10k+ 4.0494619284054144E-4 3.4401419583392006 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 18287 1.3624229925922393 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14858 1.1069547123057633 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12870 0.9588442016001597 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6444 0.4800926212207793 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3996 0.2977110667905391 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3947 0.2940604556111756 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3614 0.2692512000452974 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3473 0.2587463801210066 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3405 0.2536802258312777 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 3044 0.2267849067343346 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 2158 0.1607758964299258 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2083 0.15518822625743067 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1974 0.1470674789400711 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1930 0.14378937910554065 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1798 0.13395507960194927 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1601 0.1192781326155288 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1467 0.10929482857400422 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1456 0.1084753036153716 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1406 0.10475019016704154 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 1.4900453793320275E-4 0.0 0.0 0.0 0.0 3 1.4900453793320275E-4 0.0 0.0 0.0 0.0 4 1.4900453793320275E-4 0.0 0.0 0.0 0.0 5 1.4900453793320275E-4 0.0 0.0 0.0 0.0 6 1.4900453793320275E-4 0.0 0.0 0.0 0.0 7 1.4900453793320275E-4 0.0 0.0 0.0 0.0 8 2.980090758664055E-4 0.0 0.0 0.0 0.0 9 2.980090758664055E-4 0.0 0.0 7.450226896660138E-5 0.0 10 2.980090758664055E-4 0.0 0.0 1.4900453793320275E-4 0.0 11 3.725113448330069E-4 0.0 0.0 6.705204206994125E-4 0.0 12 3.725113448330069E-4 0.0 0.0 7.450226896660138E-4 0.0 13 3.725113448330069E-4 0.0 0.0 8.195249586326152E-4 0.0 14 3.725113448330069E-4 0.0 0.0 8.940272275992165E-4 0.0 15 4.4701361379960826E-4 0.0 0.0 0.001341040841398825 0.0 16 4.4701361379960826E-4 0.0 0.0 0.001937058993131636 0.0 17 4.4701361379960826E-4 0.0 0.0 0.00268208168279765 0.0 18 4.4701361379960826E-4 0.0 0.0 0.003278099834530461 0.0 19 4.4701361379960826E-4 0.0 0.0 0.004991652020762292 0.0 20 4.4701361379960826E-4 0.0 0.0 0.007524729165626739 0.0 21 4.4701361379960826E-4 0.0 0.0 0.013410408413988249 0.0 22 4.4701361379960826E-4 0.0 0.0 0.021903667076180806 0.0 23 4.4701361379960826E-4 0.0 0.0 0.02659731002107669 0.0 24 4.4701361379960826E-4 0.0 0.0 0.03516507095223585 0.0 25 4.4701361379960826E-4 0.0 0.0 0.042466293310962785 0.0 26 4.4701361379960826E-4 0.0 0.0 0.054237651807685805 0.0 27 4.4701361379960826E-4 0.0 0.0 0.12322675287075868 0.0 28 4.4701361379960826E-4 0.0 0.0 0.25151966003124626 0.0 29 4.4701361379960826E-4 0.0 0.0 0.4209378196612978 0.0 30 4.4701361379960826E-4 0.0 0.0 0.6547259396784929 0.0 31 4.4701361379960826E-4 0.0 0.0 0.9168994241719631 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5240 0.0 23.05439 1 GTCATAG 90 2.1527649E-6 18.5 1 ACGTTTA 70 1.2193907E-4 18.5 26 TAGGTCG 90 2.1527649E-6 18.5 21 GATCCTA 50 0.0070354827 18.499998 11 CGTCATT 100 5.8792684E-6 16.65 26 ATTAGGT 115 1.2424971E-6 16.086956 19 CGAACTA 150 4.671165E-9 16.033333 24 TTATGCG 130 2.5897134E-7 15.653846 4 AGTTCCG 190 2.7284841E-11 15.578948 32 GTATACG 95 7.061087E-5 15.578948 1 GTATTGG 570 0.0 15.578947 1 CGCCAAT 120 1.9359904E-6 15.416667 14 GTATCAA 7900 0.0 15.315189 2 GACCGTC 85 5.3649815E-4 15.235295 22 TACTGTG 255 0.0 15.235294 7 CTAATAC 280 0.0 15.196428 3 TTAACGG 110 1.4521498E-5 15.136364 35 CGATTAA 135 3.9732913E-7 15.074075 24 TCCGTAT 75 0.0041048825 14.8 13 >>END_MODULE