##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088449_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 658619 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.41916798634719 31.0 31.0 34.0 30.0 34.0 2 31.537483734905916 31.0 31.0 34.0 30.0 34.0 3 31.688281085119016 31.0 31.0 34.0 30.0 34.0 4 35.4034988362012 37.0 35.0 37.0 33.0 37.0 5 35.2789898256807 37.0 35.0 37.0 33.0 37.0 6 35.364234861126086 37.0 35.0 37.0 33.0 37.0 7 35.195077882660534 37.0 35.0 37.0 32.0 37.0 8 35.24601476726301 37.0 35.0 37.0 32.0 37.0 9 36.79789832968682 39.0 37.0 39.0 32.0 39.0 10 36.64457144418852 39.0 35.0 39.0 32.0 39.0 11 36.681604994693444 39.0 35.0 39.0 32.0 39.0 12 36.52604768462495 38.0 35.0 39.0 32.0 39.0 13 36.53957143659688 38.0 35.0 39.0 32.0 39.0 14 37.47049356304631 39.0 36.0 41.0 32.0 41.0 15 37.494903730381296 39.0 36.0 41.0 32.0 41.0 16 37.36755696388959 39.0 36.0 41.0 32.0 41.0 17 37.45306467016591 39.0 36.0 41.0 32.0 41.0 18 37.328475188234776 39.0 36.0 40.0 32.0 41.0 19 37.410754928114734 39.0 36.0 41.0 32.0 41.0 20 37.33159687163595 39.0 36.0 41.0 31.0 41.0 21 37.17319876893925 39.0 36.0 40.0 31.0 41.0 22 37.06903384202399 39.0 36.0 40.0 31.0 41.0 23 36.86437378818406 39.0 36.0 40.0 30.0 41.0 24 37.05525045587813 39.0 36.0 40.0 31.0 41.0 25 37.03239353860123 39.0 36.0 41.0 31.0 41.0 26 36.81681518449969 39.0 36.0 40.0 30.0 41.0 27 36.758335243896695 39.0 35.0 40.0 30.0 41.0 28 36.55180005435616 39.0 35.0 40.0 30.0 41.0 29 36.37766599505936 38.0 35.0 40.0 30.0 41.0 30 36.18592691677586 38.0 35.0 40.0 30.0 41.0 31 35.90869531550107 38.0 35.0 40.0 29.0 41.0 32 35.7613506443027 38.0 34.0 40.0 28.0 41.0 33 35.53576498704107 38.0 34.0 40.0 27.0 41.0 34 35.405730779099905 38.0 34.0 40.0 27.0 41.0 35 35.1456714731886 38.0 34.0 40.0 26.0 41.0 36 34.98656127442421 38.0 33.0 40.0 25.0 41.0 37 34.8127840223255 38.0 33.0 40.0 25.0 41.0 38 34.711701302270356 38.0 33.0 40.0 24.0 41.0 39 34.5871573701943 38.0 33.0 40.0 24.0 41.0 40 34.4485370145714 38.0 33.0 40.0 23.0 41.0 41 34.21322342659413 38.0 33.0 40.0 22.0 41.0 42 33.95496789494381 38.0 33.0 40.0 21.0 41.0 43 33.599038290726504 37.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 0.0 14 2.0 15 3.0 16 12.0 17 31.0 18 63.0 19 143.0 20 330.0 21 632.0 22 1151.0 23 1963.0 24 2999.0 25 4608.0 26 6742.0 27 9271.0 28 12473.0 29 16131.0 30 20167.0 31 24519.0 32 30525.0 33 37545.0 34 45872.0 35 55484.0 36 70011.0 37 92869.0 38 115049.0 39 110023.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.61556225981941 21.19783972220662 14.020700890803333 23.16589712717064 2 19.290515457343318 23.731778160059154 34.66040305548428 22.317303327113247 3 19.947799866083425 24.552434715670213 32.729241033131444 22.770524385114914 4 13.967103894664442 16.476900909326943 35.84530661884944 33.710688577159175 5 12.688215796993404 38.550664344636274 34.66131405258579 14.099805805784527 6 32.584999825392224 37.15425762087033 13.283704235681023 16.97703831805642 7 26.216826420130605 33.04687535585824 21.030064422678365 19.70623380133279 8 27.557662320704384 34.16724995786639 18.48823067661273 19.786857044816504 9 24.90438326255392 14.295366516908867 21.3387406072403 39.46150961329691 10 16.715126651372035 27.48053123277646 32.798628645696525 23.005713470154976 11 33.41765117617317 22.66636704984217 23.058854967743112 20.857126806241546 12 21.569222873922556 27.2623474269646 30.440512648435593 20.72791705067725 13 32.14954321087002 20.901310165664825 25.625437468399788 21.32370915506537 14 20.81400627677003 23.214179973550717 27.33644185788749 28.635371891791767 15 22.98840452522627 29.48700234885419 25.24312235146572 22.28147077445382 16 22.03808271550016 28.286156336212592 26.262072609505648 23.4136883387816 17 22.148920696183986 26.652131201802558 26.563764482956003 24.63518361905745 18 23.40761502477153 25.322379099297166 29.020268167180113 22.24973770875119 19 23.208106659540643 24.77061852148207 30.31676887548036 21.704505943496923 20 24.120166591003297 24.46179050406988 29.870228462889774 21.54781444203705 21 23.015734438271597 25.23431604615111 30.34759094408148 21.40235857149581 22 21.680516353157138 25.77787765005261 30.040129422321556 22.501476574468697 23 22.575571005391584 25.95779957760101 30.81599528710833 20.650634129899075 24 22.52561799765874 26.007297086783105 28.459397618349914 23.00768729720825 25 22.453649226639378 26.167177078098263 29.551834975911717 21.827338719350642 26 22.17442861502629 26.77374931485426 29.648856167222625 21.40296590289682 27 21.1547191927351 26.87486999312197 29.295996623237407 22.674414190905516 28 21.71407141306279 26.50758632836283 29.31467206381838 22.463670194756 29 21.973098255592383 26.49483236894168 28.638560381647054 22.893508993818884 30 21.734113349296027 26.812466691668472 30.563041758588806 20.89037820044669 31 22.501780240169204 26.457633320629988 30.18194130445675 20.858645134744062 32 21.938328532884718 26.396900180529258 29.170886354629914 22.493884931956106 33 21.70010279083962 26.38019856700156 29.658877135339246 22.26082150681957 34 20.926514418806626 26.828560973795167 30.396025623311807 21.8488989840864 35 20.52537202844133 28.745754373924832 29.424447214550447 21.304426383083392 36 22.66712621409343 26.5760629438264 29.179085328543515 21.57772551353666 37 21.685526837215445 27.33583452648648 29.114860032886998 21.863778603411077 38 21.576814516435146 25.786835788217466 30.575188386608946 22.061161308738438 39 20.992713541516416 25.708034538936776 31.263294863950176 22.035957055596636 40 19.865050962696188 26.28803602689871 30.948089866827406 22.898823143577697 41 21.11858297437517 25.02068722584681 31.275745157670826 22.584984642107198 42 19.80583615109798 26.955341403755433 30.7423563547362 22.49646609041039 43 20.190276927935574 26.844351590221354 29.88176775950891 23.083603722334157 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 23.0 1 66.0 2 109.0 3 288.0 4 467.0 5 467.0 6 732.5 7 998.0 8 1149.5 9 1301.0 10 2025.5 11 2750.0 12 2750.0 13 5293.0 14 7836.0 15 12715.5 16 17595.0 17 16065.5 18 14536.0 19 14536.0 20 15060.0 21 15584.0 22 12247.0 23 8910.0 24 9924.5 25 10939.0 26 10939.0 27 11890.5 28 12842.0 29 13988.0 30 15134.0 31 16594.5 32 18055.0 33 18055.0 34 20279.5 35 22504.0 36 24868.0 37 27232.0 38 29100.5 39 30969.0 40 30969.0 41 31847.5 42 32726.0 43 35219.0 44 37712.0 45 40300.5 46 42889.0 47 42889.0 48 56171.5 49 69454.0 50 65470.0 51 61486.0 52 57078.0 53 52670.0 54 52670.0 55 46589.0 56 40508.0 57 35097.5 58 29687.0 59 26336.5 60 22986.0 61 22986.0 62 20328.5 63 17671.0 64 15301.5 65 12932.0 66 11323.0 67 9714.0 68 9714.0 69 8446.0 70 7178.0 71 6109.5 72 5041.0 73 4189.0 74 3337.0 75 3337.0 76 2759.5 77 2182.0 78 1693.5 79 1205.0 80 947.5 81 690.0 82 690.0 83 521.0 84 352.0 85 279.0 86 206.0 87 164.0 88 122.0 89 122.0 90 89.0 91 56.0 92 36.0 93 16.0 94 13.5 95 11.0 96 11.0 97 7.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 658619.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.20733912034159 #Duplication Level Percentage of deduplicated Percentage of total 1 86.46615828178086 52.05897314104312 2 7.748945325116999 9.330867580286096 3 2.175962697634118 3.9302677214901194 4 0.9889723490160233 2.3817357439139415 5 0.5692182329378095 1.713555759198414 6 0.3783730175630425 1.3668499549443036 7 0.2566964382117671 1.081850665447977 8 0.19511665900034314 0.9397963885169367 9 0.14809840076198988 0.8024949574071643 >10 0.9402337255858777 10.68912190715627 >50 0.08004420152627442 3.3312286037719248 >100 0.04508815249486955 5.1948709860425675 >500 0.004306171867479237 1.739503228333942 >1k 0.002026433819990229 2.139531017911351 >5k 7.599126824963359E-4 3.299352344535902 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 8514 1.292704887043951 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7087 1.0760394097346113 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6033 0.9160075855691986 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3004 0.4561058821564516 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1856 0.28180177006736823 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1797 0.27284363190251115 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1770 0.2687441449457122 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1634 0.24809487731146537 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1501 0.227901108227974 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1454 0.2207649642661387 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1013 0.15380667730508837 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 952 0.14454487343972766 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 926 0.14059721933318048 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 848 0.12875425701353893 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 837 0.12708409566076898 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 786 0.11934062029792641 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 686 0.10415733527274493 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 672 0.10203167536921953 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 3.0366570050362955E-4 0.0 10 0.0 0.0 0.0 3.0366570050362955E-4 0.0 11 0.0 0.0 0.0 4.554985507554443E-4 0.0 12 0.0 0.0 0.0 0.0010628299517627035 0.0 13 0.0 0.0 0.0 0.0012146628020145182 1.5183285025181477E-4 14 0.0 3.0366570050362955E-4 0.0 0.001366495652266333 1.5183285025181477E-4 15 0.0 3.0366570050362955E-4 0.0 0.0018219942030217773 1.5183285025181477E-4 16 0.0 3.0366570050362955E-4 0.0 0.002732991304532666 1.5183285025181477E-4 17 0.0 3.0366570050362955E-4 0.0 0.00349215555579174 1.5183285025181477E-4 18 0.0 3.0366570050362955E-4 0.0 0.004099486956798999 1.5183285025181477E-4 19 1.5183285025181477E-4 3.0366570050362955E-4 0.0 0.004554985507554444 1.5183285025181477E-4 20 1.5183285025181477E-4 3.0366570050362955E-4 0.0 0.006832478261331665 1.5183285025181477E-4 21 1.5183285025181477E-4 3.0366570050362955E-4 0.0 0.013209457971907887 1.5183285025181477E-4 22 1.5183285025181477E-4 3.0366570050362955E-4 0.0 0.020497434783994996 1.5183285025181477E-4 23 1.5183285025181477E-4 3.0366570050362955E-4 0.0 0.024900587441297625 1.5183285025181477E-4 24 1.5183285025181477E-4 4.554985507554443E-4 0.0 0.03234039710363655 1.5183285025181477E-4 25 1.5183285025181477E-4 4.554985507554443E-4 0.0 0.03735088116194644 1.5183285025181477E-4 26 1.5183285025181477E-4 4.554985507554443E-4 0.0 0.04706818357806258 1.5183285025181477E-4 27 1.5183285025181477E-4 6.073314010072591E-4 0.0 0.10931965218130664 1.5183285025181477E-4 28 1.5183285025181477E-4 6.073314010072591E-4 0.0 0.22835660677872943 1.5183285025181477E-4 29 1.5183285025181477E-4 6.073314010072591E-4 0.0 0.40858220002763357 1.5183285025181477E-4 30 1.5183285025181477E-4 6.073314010072591E-4 0.0 0.6387608010093848 1.5183285025181477E-4 31 1.5183285025181477E-4 6.073314010072591E-4 0.0 0.8979394763892327 1.5183285025181477E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCAAACG 25 0.00549466 29.6 4 GGTATGA 55 1.9010597E-5 23.545454 1 GTATACT 50 2.7004044E-4 22.2 4 GGTATCA 2310 0.0 21.623377 1 CGTTATA 45 0.0038240987 20.555557 10 TGTTACG 90 9.4629286E-8 20.555557 16 TACCCTC 110 1.7516868E-9 20.181818 5 TGGATAG 55 5.139889E-4 20.181818 5 GTGTAGA 65 6.896412E-5 19.923077 1 GTATTAG 75 9.255924E-6 19.733334 1 TAGTACT 85 1.2436558E-6 19.588236 4 GTATTGG 265 0.0 19.54717 1 ACCGTTA 165 0.0 19.060606 8 TTAGGTC 50 0.00703177 18.5 20 GACCGTT 170 0.0 18.5 7 TTAGACC 50 0.00703177 18.5 4 ATACTAC 60 9.2311075E-4 18.5 6 TGGACCC 355 0.0 18.239437 5 CCGTTAT 185 0.0 18.0 9 CGAACTA 95 3.601659E-6 17.526316 29 >>END_MODULE